GenTIGSA Gene Database on Rare Genetic Disorders
  Beta Version

Identically mapped variants grouped by clinical cignificance   

IndiGenome variants annotation  Total 62 identically mapped variants with pathogenic
IndiGenomes vs ClinVar Notes GeneTIGS:RGD Gene symbol Clinical significance Phenotype List Review Status Variation/condition record
IndiGenomes ID:        chr1:236482455:G>A

ClinVar:GenTIGS ID: chr1:236482455:G>A

 

ClinVar Entry NM_145861.4(EDARADD):c.454G>A (p.Glu152Lys)

Ectodermal dysplasia
EDARADD Pathogenic Ectodermal dysplasia 11B, hypohidrotic/hair/tooth type, autosomal recessive
 
Ectodermal dysplasia 10A, hypohidrotic/hair/nail type, autosomal dominant
No Assertion Criteria Provided

2 Submitters

RCV000004407
RCV001729334

IndiGenomes ID:        chr2:232480717:C>A

ClinVar:GenTIGS ID: chr2:232480717:C>A

 

ClinVar Entry NM_004826.4(ECEL1):c.2151+1G>T

Not in GenTIGS ECEL1 Pathogenic Distal arthrogryposis type 5D Criteria Provided
Single Submitter

1 Submitters

RCV001354049

IndiGenomes ID:        chr1:230236716:C>T

ClinVar:GenTIGS ID: chr1:230236716:C>T

 

ClinVar Entry NM_004481.5(GALNT2):c.598C>T (p.Arg200Ter)

Congenital disorder of glycosylation
GALNT2 Pathogenic Congenital disorder of glycosylation, type iit
 
Condition: not provided
Criteria Provided
Multiple Submitters
No Conflicts

3 Submitters

RCV001095798
RCV003442203

IndiGenomes ID:        chr2:227246017:G>A

ClinVar:GenTIGS ID: chr2:227246017:G>A

 

ClinVar Entry NM_000091.5(COL4A3):c.387+1G>A

Goodpasture syndrome


Alport syndrome

COL4A3 Pathogenic Hereditary hearing loss and deafness No Assertion Criteria Provided

1 Submitters

RCV001003416

IndiGenomes ID:        chr1:215970661:T>TTGGACTCTGAAGGAATG

ClinVar:GenTIGS ID: chr1:215970661:T>TTGGACTCTGAAGGAATG

 

ClinVar Entry NM_206933.4(USH2A):c.6904_6920dup (p.Gln2307fs)

Usher syndrome


Retinitis pigmentosa

USH2A Pathogenic Condition: not provided
 
Usher syndrome
 
Usher syndrome type 2A
 
Retinitis pigmentosa 39
Criteria Provided
Multiple Submitters
No Conflicts

4 Submitters

RCV001228843
RCV003389489
RCV003449720
RCV003462781

IndiGenomes ID:        chr1:209788590:G>A

ClinVar:GenTIGS ID: chr1:209788590:G>A

 

ClinVar Entry NM_006147.4(IRF6):c.1234C>T (p.Arg412Ter)

Van der Woude syndrome 1
IRF6 Pathogenic Van der Woude syndrome 1
 
Popliteal pterygium syndrome
 
Van der Woude syndrome
 
Orofacial cleft 6, susceptibility to
 
Condition: not provided
 
Van der Woude syndrome
Criteria Provided
Multiple Submitters
No Conflicts

4 Submitters

RCV000556227
RCV000684776
RCV001584247
RCV003314608

IndiGenomes ID:        chr1:197090004:G>A

ClinVar:GenTIGS ID: chr1:197090004:G>A

 

ClinVar Entry NM_018136.5(ASPM):c.9910C>T (p.Arg3304Ter)

Not in GenTIGS ASPM Pathogenic Microcephaly 5, primary, autosomal recessive
 
Condition: not provided
Criteria Provided
Multiple Submitters
No Conflicts

5 Submitters

RCV000145241
RCV000255897

IndiGenomes ID:        chr1:171103822:C>G

ClinVar:GenTIGS ID: chr1:171103822:C>G

 

ClinVar Entry NM_001002294.3(FMO3):c.170C>G (p.Ser57Ter)

Trimethylaminuria
FMO3 Pathogenic Condition: not provided Criteria Provided
Single Submitter

1 Submitters

RCV003562839

IndiGenomes ID:        chr4:169406633:C>A

ClinVar:GenTIGS ID: chr4:169406633:C>A

 

ClinVar Entry NM_001199397.3(NEK1):c.3337G>T (p.Glu1113Ter)

Amyotrophic lateral sclerosis
NEK1 Pathogenic Short-rib thoracic dysplasia 6 with or without polydactyly
 
Condition: not provided
Criteria Provided
Multiple Submitters
No Conflicts

2 Submitters

RCV001291528
RCV003127762

IndiGenomes ID:        chr1:156875009:G>A

ClinVar:GenTIGS ID: chr1:156875009:G>A

 

ClinVar Entry NM_002529.4(NTRK1):c.1354+1G>A

Charcot-Marie-Tooth disease


Familial medullary thyroid carcinoma

NTRK1 Pathogenic Hereditary insensitivity to pain with anhidrosis Criteria Provided
Multiple Submitters
No Conflicts

3 Submitters

RCV001784762

IndiGenomes ID:        chr1:155239937:G>A

ClinVar:GenTIGS ID: chr1:155239937:G>A

 

ClinVar Entry NM_000157.4(GBA1):c.256C>T (p.Arg86Ter)

Gaucher disease
GBA1 Pathogenic Gaucher disease Criteria Provided
Single Submitter

1 Submitters

RCV001779515

IndiGenomes ID:        chr5:148123905:C>T

ClinVar:GenTIGS ID: chr5:148123905:C>T

 

ClinVar Entry NM_006846.4(SPINK5):c.2611C>T (p.Arg871Ter)

Netherton syndrome
SPINK5 Pathogenic Ichthyosis linearis circumflexa Criteria Provided
Single Submitter

1 Submitters

RCV003763906

IndiGenomes ID:        chr9:131512069:C>T

ClinVar:GenTIGS ID: chr9:131512069:C>T

 

ClinVar Entry NM_001077365.2(POMT1):c.1015C>T (p.Gln339Ter)

Limb-girdle muscular dystrophy
POMT1 Pathogenic Condition: not provided
 
Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A1
Criteria Provided
Multiple Submitters
No Conflicts

3 Submitters

RCV000734638
RCV003465669

IndiGenomes ID:        chr7:117665565:G>A

ClinVar:GenTIGS ID: chr7:117665565:G>A

 

ClinVar Entry NM_000492.4(CFTR):c.4242+1G>A

Hereditary pancreatitis
CFTR Pathogenic Cystic fibrosis
 
CFTR-related disorder
 
Bronchiectasis with or without elevated sweat chloride 1
 
Hereditary pancreatitis
 
Cystic fibrosis
 
Congenital bilateral aplasia of vas deferens from CFTR mutation
Reviewed By Expert Panel

9 Submitters

RCV000576317
RCV001826684
RCV002504944

IndiGenomes ID:        chr7:117535287:C>T

ClinVar:GenTIGS ID: chr7:117535287:C>T

 

ClinVar Entry NM_000492.4(CFTR):c.619C>T (p.Gln207Ter)

Hereditary pancreatitis
CFTR Pathogenic Cystic fibrosis Criteria Provided
Single Submitter

2 Submitters

RCV001272230

IndiGenomes ID:        chr6:116617083:C>T

ClinVar:GenTIGS ID: chr6:116617083:C>T

 

ClinVar Entry NM_001010892.3(RSPH4A):c.460C>T (p.Gln154Ter)

Not in GenTIGS RSPH4A Pathogenic Primary ciliary dyskinesia 11
 
Primary ciliary dyskinesia
Criteria Provided
Single Submitter

3 Submitters

RCV000000532
RCV000226196

IndiGenomes ID:        chr12:110614207:C>CTCCT

ClinVar:GenTIGS ID: chr12:110614207:C>CTCCT

 

ClinVar Entry NM_001082538.3(TCTN1):c.26_29dup (p.Val11fs)

Joubert syndrome
TCTN1 Pathogenic Joubert syndrome 13 Criteria Provided
Single Submitter

1 Submitters

RCV001335645

IndiGenomes ID:        chr11:102083171:A>G

ClinVar:GenTIGS ID: chr11:102083171:A>G

 

ClinVar Entry NM_032930.3(CFAP300):c.776A>G (p.His259Arg)

Ciliary dyskinesia
CFAP300 Pathogenic Ciliary dyskinesia, primary, 38 No Assertion Criteria Provided

1 Submitters

RCV000664433

IndiGenomes ID:        chr12:101749181:G>A

ClinVar:GenTIGS ID: chr12:101749181:G>A

 

ClinVar Entry NM_024312.5(GNPTAB):c.3613C>T (p.Arg1205Ter)

Mucolipidosis type II
GNPTAB Pathogenic Pseudo-Hurler polydystrophy
 
Mucolipidosis type II
 
Mucolipidosis type II
 
Pseudo-Hurler polydystrophy
 
Mucolipidosis
 
Condition: not provided
Criteria Provided
Multiple Submitters
No Conflicts

8 Submitters

RCV000031986
RCV000032344
RCV000670953
RCV001193437
RCV003488353

IndiGenomes ID:        chr9:101429754:C>T

ClinVar:GenTIGS ID: chr9:101429754:C>T

 

ClinVar Entry NM_000035.4(ALDOB):c.324+1G>A

Hereditary fructosuria
ALDOB Pathogenic Hereditary fructosuria Criteria Provided
Multiple Submitters
No Conflicts

6 Submitters

RCV000202622

IndiGenomes ID:        chr13:101073631:G>A

ClinVar:GenTIGS ID: chr13:101073631:G>A

 

ClinVar Entry NM_052867.4(NALCN):c.4150C>T (p.Arg1384Ter)

Arthrogryposis multiplex congenita
NALCN Pathogenic Hypotonia, infantile, with psychomotor retardation and characteristic facies 1
 
NALCN-related disorder
 
Congenital contractures of the limbs and face, hypotonia, and developmental delay
Criteria Provided
Multiple Submitters
No Conflicts

3 Submitters

RCV000845225
RCV003336223
RCV003984848

IndiGenomes ID:        chr1:94000900:G>A

ClinVar:GenTIGS ID: chr1:94000900:G>A

 

ClinVar Entry NM_000350.3(ABCA4):c.6415C>T (p.Arg2139Trp)

Cone rod dystrophy


Stargardt disease

ABCA4 Pathogenic Condition: not provided Criteria Provided
Single Submitter

2 Submitters

RCV000085818

IndiGenomes ID:        chr7:92503105:A>T

ClinVar:GenTIGS ID: chr7:92503105:A>T

 

ClinVar Entry NM_000466.3(PEX1):c.2162T>A (p.Leu721Ter)

Peroxisome biogenesis disorder
PEX1 Pathogenic Zellweger spectrum disorders Criteria Provided
Single Submitter

1 Submitters

RCV001901725

IndiGenomes ID:        chr14:91314114:G>A

ClinVar:GenTIGS ID: chr14:91314114:G>A

 

ClinVar Entry NM_001080414.4(CCDC88C):c.1702C>T (p.Arg568Ter)

Spastic ataxia


Spinocerebellar ataxia type 40

CCDC88C Pathogenic Condition: not provided Criteria Provided
Single Submitter

1 Submitters

RCV003721104

IndiGenomes ID:        chr5:90629303:C>T

ClinVar:GenTIGS ID: chr5:90629303:C>T

 

ClinVar Entry NM_032119.4(ADGRV1):c.1603C>T (p.Arg535Ter)

Usher syndrome


Retinitis pigmentosa

ADGRV1 Pathogenic Condition: not provided Criteria Provided
Single Submitter

1 Submitters

RCV002701346

IndiGenomes ID:        chr8:89971175:G>A

ClinVar:GenTIGS ID: chr8:89971175:G>A

 

ClinVar Entry NM_002485.5(NBN):c.700C>T (p.Gln234Ter)

Hereditary breast ovarian cancer syndrome
NBN Pathogenic Microcephaly, normal intelligence and immunodeficiency Criteria Provided
Single Submitter

1 Submitters

RCV003618236

IndiGenomes ID:        chr15:89210759:C>T

ClinVar:GenTIGS ID: chr15:89210759:C>T

 

ClinVar Entry NM_000326.5(RLBP1):c.735G>A (p.Trp245Ter)

Retinitis pigmentosa
RLBP1 Pathogenic Condition: not provided Criteria Provided
Single Submitter

1 Submitters

RCV003578696

IndiGenomes ID:        chr16:88822614:C>T

ClinVar:GenTIGS ID: chr16:88822614:C>T

 

ClinVar Entry NM_000512.5(GALNS):c.1339G>A (p.Asp447Asn)

Mucopolysaccharidosis, MPS-IV-A
GALNS Pathogenic Mucopolysaccharidosis, MPS-IV-A Criteria Provided
Single Submitter

1 Submitters

RCV003599212

IndiGenomes ID:        chr16:88810517:G>A

ClinVar:GenTIGS ID: chr16:88810517:G>A

 

ClinVar Entry NM_000485.3(APRT):c.227C>T (p.Ala76Val)

Adenine phosphoribosyltransferase deficiency
APRT Pathogenic Adenine phosphoribosyltransferase deficiency Criteria Provided
Single Submitter

1 Submitters

RCV001269439

IndiGenomes ID:        chr12:88071890:T>TA

ClinVar:GenTIGS ID: chr12:88071890:T>TA

 

ClinVar Entry NM_025114.4(CEP290):c.5745dup (p.Lys1916Ter)

Retinitis pigmentosa


Joubert syndrome


Leber congenital amaurosis


Bardet-Biedl syndrome


Nephronophthisis


Senior-Loken syndrome

CEP290 Pathogenic Meckel syndrome, type 4
 
Meckel-Gruber syndrome
 
Familial aplasia of the vermis
 
Nephronophthisis
 
Bardet-Biedl syndrome 14
Criteria Provided
Multiple Submitters
No Conflicts

3 Submitters

RCV000656738
RCV001208507
RCV003465425

IndiGenomes ID:        chr12:88055666:A>AT

ClinVar:GenTIGS ID: chr12:88055666:A>AT

 

ClinVar Entry NM_025114.4(CEP290):c.6869dup (p.Asn2290fs)

Retinitis pigmentosa


Joubert syndrome


Leber congenital amaurosis


Bardet-Biedl syndrome


Nephronophthisis


Senior-Loken syndrome

CEP290 Pathogenic Leber congenital amaurosis 10
 
Nephronophthisis
 
Familial aplasia of the vermis
 
Meckel-Gruber syndrome
 
Retinal dystrophy
 
CEP290-related disorder
 
Leber congenital amaurosis
 
Bardet-Biedl syndrome 14
 
Leber congenital amaurosis 10
 
Meckel syndrome, type 4
 
Bardet-Biedl syndrome 14
 
Senior-Loken syndrome 6
 
Joubert syndrome 5
Criteria Provided
Multiple Submitters
No Conflicts

7 Submitters

RCV000144468
RCV000457302
RCV001075551
RCV002271421
RCV001276483
RCV003467204
RCV002483278

IndiGenomes ID:        chr14:87939926:A>T

ClinVar:GenTIGS ID: chr14:87939926:A>T

 

ClinVar Entry NM_000153.4(GALC):c.1890T>A (p.Tyr630Ter)

Spastic ataxia
GALC Pathogenic Galactosylceramide beta-galactosidase deficiency
 
Condition: not provided
Criteria Provided
Multiple Submitters
No Conflicts

3 Submitters

RCV000411823
RCV000482303

IndiGenomes ID:        chr1:85267841:G>A

ClinVar:GenTIGS ID: chr1:85267841:G>A

 

ClinVar Entry NM_003921.5(BCL10):c.488C>T (p.Thr163Met)

Sezary syndrome


Mucosa-associated lymphoma

BCL10 Pathogenic Malignant tumor of testis No Assertion Criteria Provided

1 Submitters

RCV000023309

IndiGenomes ID:        chr10:84208210:C>T

ClinVar:GenTIGS ID: chr10:84208210:C>T

 

ClinVar Entry NM_033100.4(CDHR1):c.1000C>T (p.Gln334Ter)

Retinitis pigmentosa
CDHR1 Pathogenic Condition: not provided Criteria Provided
Single Submitter

1 Submitters

RCV001383463

IndiGenomes ID:        chr11:68906198:C>G

ClinVar:GenTIGS ID: chr11:68906198:C>G

 

ClinVar Entry NM_002180.3(IGHMBP2):c.216C>G (p.Tyr72Ter)

Charcot-Marie-Tooth disease
IGHMBP2 Pathogenic Autosomal recessive distal spinal muscular atrophy 1
 
Charcot-Marie-Tooth disease axonal type 2S
Criteria Provided
Single Submitter

1 Submitters

RCV001038862

IndiGenomes ID:        chr12:68731651:C>T

ClinVar:GenTIGS ID: chr12:68731651:C>T

 

ClinVar Entry NM_020401.4(NUP107):c.1930C>T (p.Arg644Ter)

Galloway-Mowat syndrome
NUP107 Pathogenic Condition: not provided Criteria Provided
Single Submitter

1 Submitters

RCV003031434

IndiGenomes ID:        chr1:68439640:T>A

ClinVar:GenTIGS ID: chr1:68439640:T>A

 

ClinVar Entry NM_000329.3(RPE65):c.646A>T (p.Lys216Ter)

Leber congenital amaurosis
RPE65 Pathogenic Retinitis pigmentosa 20
 
Leber congenital amaurosis 2
Criteria Provided
Single Submitter

1 Submitters

RCV003804670

IndiGenomes ID:        chr16:56902446:G>T

ClinVar:GenTIGS ID: chr16:56902446:G>T

 

ClinVar Entry NM_001126108.2(SLC12A3):c.2794G>T (p.Glu932Ter)

Bartter syndrome


Familial hypokalemia-hypomagnesemia

SLC12A3 Pathogenic Condition: not provided Criteria Provided
Single Submitter

1 Submitters

RCV001949666

IndiGenomes ID:        chr5:53108556:G>A

ClinVar:GenTIGS ID: chr5:53108556:G>A

 

ClinVar Entry NM_176806.4(MOCS2):c.106C>T (p.Gln36Ter)

Sulfite oxidase deficiency
MOCS2 Pathogenic Condition: not provided Criteria Provided
Single Submitter

1 Submitters

RCV002007215

IndiGenomes ID:        chr13:51944170:C>T

ClinVar:GenTIGS ID: chr13:51944170:C>T

 

ClinVar Entry NM_000053.4(ATP7B):c.3182G>A (p.Gly1061Glu)

Wilson disease
ATP7B Pathogenic Not specified
 
Wilson disease
 
Inborn genetic diseases
 
Condition: not provided
Criteria Provided
Multiple Submitters
No Conflicts

15 Submitters

RCV000506750
RCV000395391
RCV002321983
RCV001558379

IndiGenomes ID:        chr7:50470090:G>A

ClinVar:GenTIGS ID: chr7:50470090:G>A

 

ClinVar Entry NM_001082971.2(DDC):c.1123C>T (p.Gln375Ter)

Aromatic L-amino acid decarboxylase deficiency
DDC Pathogenic Deficiency of aromatic-L-amino-acid decarboxylase Criteria Provided
Multiple Submitters
No Conflicts

2 Submitters

RCV003838905

IndiGenomes ID:        chr17:47945558:G>A

ClinVar:GenTIGS ID: chr17:47945558:G>A

 

ClinVar Entry NM_018129.4(PNPO):c.364-1G>A

Pyridoxal phosphate-responsive seizures
PNPO Pathogenic Pyridoxal phosphate-responsive seizures Criteria Provided
Multiple Submitters
No Conflicts

3 Submitters

RCV000006897

IndiGenomes ID:        chr21:46119852:T>C

ClinVar:GenTIGS ID: chr21:46119852:T>C

 

ClinVar Entry NM_001849.4(COL6A2):c.1332+2T>C

Bethlem myopathy
COL6A2 Pathogenic Bethlem myopathy 1A Criteria Provided
Single Submitter

1 Submitters

RCV001918252

IndiGenomes ID:        chr17:44901113:C>T

ClinVar:GenTIGS ID: chr17:44901113:C>T

 

ClinVar Entry NM_213607.3(CCDC103):c.115C>T (p.Gln39Ter)

Not in GenTIGS CCDC103 Pathogenic Primary ciliary dyskinesia Criteria Provided
Multiple Submitters
No Conflicts

2 Submitters

RCV000467115

IndiGenomes ID:        chr2:43851647:C>A

ClinVar:GenTIGS ID: chr2:43851647:C>A

 

ClinVar Entry NM_022437.3(ABCG8):c.386C>A (p.Ser129Ter)

Sitosterolemia
ABCG8 Pathogenic Condition: not provided Criteria Provided
Single Submitter

1 Submitters

RCV003109206

IndiGenomes ID:        chr17:42911016:G>A

ClinVar:GenTIGS ID: chr17:42911016:G>A

 

ClinVar Entry NM_000151.4(G6PC1):c.664G>A (p.Gly222Arg)

Glycogen storage disease due to glucose-6-phosphatase deficiency type IA
G6PC1 Pathogenic Glycogen storage disease due to glucose-6-phosphatase deficiency type IA Criteria Provided
Multiple Submitters
No Conflicts

3 Submitters

RCV001235195

IndiGenomes ID:        chr1:42750250:G>T

ClinVar:GenTIGS ID: chr1:42750250:G>T

 

ClinVar Entry NM_022356.4(P3H1):c.1656C>A (p.Tyr552Ter)

Osteogenesis imperfecta
P3H1 Pathogenic Osteogenesis imperfecta type 8 No Assertion Criteria Provided

1 Submitters

RCV000001318

IndiGenomes ID:        chr1:42747722:C>T

ClinVar:GenTIGS ID: chr1:42747722:C>T

 

ClinVar Entry NM_022356.4(P3H1):c.1914+1G>A

Osteogenesis imperfecta
P3H1 Pathogenic Osteogenesis imperfecta type 8 Criteria Provided
Single Submitter

1 Submitters

RCV003494626

IndiGenomes ID:        chr15:42410958:G>C

ClinVar:GenTIGS ID: chr15:42410958:G>C

 

ClinVar Entry NM_000070.3(CAPN3):c.2338G>C (p.Asp780His)

Limb-girdle muscular dystrophy
CAPN3 Pathogenic Autosomal recessive limb-girdle muscular dystrophy type 2A
 
Condition: not provided
 
Muscular dystrophy, limb-girdle, autosomal dominant 4
Criteria Provided
Multiple Submitters
No Conflicts

12 Submitters

RCV000176251
RCV000386470
RCV003474930

IndiGenomes ID:        chr13:38690828:C>T

ClinVar:GenTIGS ID: chr13:38690828:C>T

 

ClinVar Entry NM_207361.6(FREM2):c.3484C>T (p.Arg1162Ter)

Fraser syndrome


Congenital diaphragmatic hernia

FREM2 Pathogenic Condition: not provided Criteria Provided
Single Submitter

1 Submitters

RCV003868561

IndiGenomes ID:        chr19:35848087:C>T

ClinVar:GenTIGS ID: chr19:35848087:C>T

 

ClinVar Entry NM_004646.4(NPHS1):c.1394G>A (p.Cys465Tyr)

Finnish congenital nephrotic syndrome
NPHS1 Pathogenic Finnish congenital nephrotic syndrome Criteria Provided
Single Submitter

2 Submitters

RCV000049852

IndiGenomes ID:        chr3:33068940:C>T

ClinVar:GenTIGS ID: chr3:33068940:C>T

 

ClinVar Entry NM_000404.4(GLB1):c.276G>A (p.Trp92Ter)

GM1 gangliosidosis type 2


Infantile GM1 gangliosidosis

GLB1 Pathogenic GM1 gangliosidosis type 3
 
GM1 gangliosidosis type 2
 
Mucopolysaccharidosis, MPS-IV-B
 
Infantile GM1 gangliosidosis
 
Infantile GM1 gangliosidosis
 
Condition: not provided
 
Mucopolysaccharidosis, MPS-IV-B
 
GM1 gangliosidosis
Criteria Provided
Multiple Submitters
No Conflicts

5 Submitters

RCV000670448
RCV000766231
RCV001091797
RCV001387511

IndiGenomes ID:        chr2:31373894:T>TG

ClinVar:GenTIGS ID: chr2:31373894:T>TG

 

ClinVar Entry NM_000379.4(XDH):c.1664dup (p.Ala556fs)

Xanthinuria type II
XDH Pathogenic Xanthinuria type II Criteria Provided
Single Submitter

1 Submitters

RCV002944197

IndiGenomes ID:        chr22:20994728:G>C

ClinVar:GenTIGS ID: chr22:20994728:G>C

 

ClinVar Entry NM_006767.4(LZTR1):c.1785+1G>C

Noonan syndrome


Schwannomatosis


Congenital diaphragmatic hernia

LZTR1 Pathogenic Noonan syndrome 10 Criteria Provided
Single Submitter

1 Submitters

RCV001264409

IndiGenomes ID:        chr22:20983039:C>CA

ClinVar:GenTIGS ID: chr22:20983039:C>CA

 

ClinVar Entry NM_006767.4(LZTR1):c.214dup (p.Thr72fs)

Noonan syndrome


Schwannomatosis


Congenital diaphragmatic hernia

LZTR1 Pathogenic Cardiovascular phenotype
 
Hereditary cancer-predisposing syndrome
Criteria Provided
Single Submitter

1 Submitters

RCV002432437

IndiGenomes ID:        chr17:16948877:G>T

ClinVar:GenTIGS ID: chr17:16948877:G>T

 

ClinVar Entry NM_012452.3(TNFRSF13B):c.306C>A (p.Tyr102Ter)

Common variable immune deficiency
TNFRSF13B Pathogenic Immunodeficiency, common variable, 2 Criteria Provided
Single Submitter

1 Submitters

RCV002765802

IndiGenomes ID:        chr19:12893515:T>C

ClinVar:GenTIGS ID: chr19:12893515:T>C

 

ClinVar Entry NM_000159.4(GCDH):c.367T>C (p.Tyr123His)

Glutaric aciduria, type 1
GCDH Pathogenic Glutaric aciduria, type 1 Criteria Provided
Single Submitter

1 Submitters

RCV003873989

IndiGenomes ID:        chr17:8072842:G>T

ClinVar:GenTIGS ID: chr17:8072842:G>T

 

ClinVar Entry NM_001139.3(ALOX12B):c.2035C>A (p.Arg679Ser)

Lamellar ichthyosis
ALOX12B Pathogenic Autosomal recessive congenital ichthyosis 2 No Assertion Criteria Provided

1 Submitters

RCV001289926

IndiGenomes ID:        chr19:6718117:G>A

ClinVar:GenTIGS ID: chr19:6718117:G>A

 

ClinVar Entry NM_000064.4(C3):c.481C>T (p.Arg161Trp)

C3 Pathogenic Condition: not provided
 
Atypical hemolytic-uremic syndrome with C3 anomaly
Criteria Provided
Multiple Submitters
No Conflicts

4 Submitters

RCV001507921
RCV002466678

IndiGenomes ID:        chr6:5613216:G>T

ClinVar:GenTIGS ID: chr6:5613216:G>T

 

ClinVar Entry NM_006567.5(FARS2):c.1113G>T (p.Leu371Phe)

Hereditary spastic paraplegia
FARS2 Pathogenic Combined oxidative phosphorylation defect type 14 No Assertion Criteria Provided

1 Submitters

RCV001250395

IndiGenomes ID:        chr16:3757373:C>A

ClinVar:GenTIGS ID: chr16:3757373:C>A

 

ClinVar Entry NM_004380.3(CREBBP):c.3613G>T (p.Glu1205Ter)

Glioblastoma


Multiple myeloma

CREBBP Pathogenic Rubinstein-Taybi syndrome due to CREBBP mutations Criteria Provided
Single Submitter

1 Submitters

RCV000145738

IndiGenomes ID:        chr9:452071:C>T

ClinVar:GenTIGS ID: chr9:452071:C>T

 

ClinVar Entry NM_203447.4(DOCK8):c.6022C>T (p.Arg2008Ter)

Not in GenTIGS DOCK8 Pathogenic Autosomal recessive hyper-IgE syndrome Criteria Provided
Single Submitter

1 Submitters

RCV003763455