GenTIGSA Gene Database on Rare Genetic Disorders

Cadherin related family member 1 (CDHR1) Associated conditions:  1. Retinitis pigmentosa 
mRNA Information: Transcript Variants and Protein Isoforms
SNo. Status mRNA accession Protein accession Genomic DNA accession (Chromosome) mRNA location on genomic DNA Assembly UniProtkb ID
1 REVIEWED NM_001171971.3 NP_001165442.1 NC_000010.11 (84194536..84219620) Reference GRCh38.p14 Primary Assembly Q96JP9
2 REVIEWED NM_033100.4 NP_149091.1 NC_000010.11 (84194536..84219620) Reference GRCh38.p14 Primary Assembly Q96JP9

Transcript variants arise from alternative splicing during gene expression, producing multiple mRNA transcripts from a single gene, each encoding distinct protein isoforms.

PubMed Links for Transcript Variants (Isoforms)
Link 130 reference articles

Variant Information Cadherin related family member 1 (CDHR1Mutation Visualization Dashboard: Pathogenic variant distribution chart

 

IndiGenomes variants: Exploring and mapping pathogenic variants in gene Cadherin related family member 1 (CDHR1)
ClinVar variants:Revealing mutagenic patterns

GO Term of Cadherin related family member 1 (CDHR1)
SNo. Reported in speceis Evidence Qualifier GO term Category Pubmed Link
1Homo sapiensNDenablesmolecular_functionFunction
2Homo sapiensIEAenablescalcium ion bindingFunction
3Homo sapiensNDis_active_incellular_componentComponent
4Homo sapiensIBAinvolved_incell adhesionProcess21873635 
5Homo sapiensIEAinvolved_inhomophilic cell adhesion via plasma membrane adhesion moleculesProcess
6Homo sapiensIMPinvolved_inphotoreceptor cell morphogenesisProcess23044944 
7Homo sapiensIMPinvolved_inphotoreceptor cell outer segment organizationProcess23044944 
8Homo sapiensIEAlocated_inphotoreceptor outer segment membraneComponent
9Homo sapiensIMPinvolved_inphotoreceptor cell maintenanceProcess20805371