GenTIGSA Gene Database on Rare Genetic Disorders
  Beta Version

Lists of Rare Genetic Disorders      

Charcot-Marie-Tooth Disease(Charcot Marie Tooth) 
An Autosomal dominant, Autosomal recessive, X-linked recessive, X-linked dominant mode(s) within the Neuromuscular disorders category
Reported Pathogenic variants
Candidate Gene Information
S.No. Name/GeneID Description Cytogentic Band Gene Location on genomic DNA Gene Length Exons Details Gene Cross-References
1 FGD4/121512 FYVE, RhoGEF and PH domain containing 4 12p11.21 Chr12, NC_000012.12
(32399558..32646050)
246493 nt 26 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

2 MED25/81857 mediator complex subunit 25 19q13.33 Chr19, NC_000019.10
(49818289..49840384)
22096 nt 19 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

3 FIG4/9896 FIG4 phosphoinositide 5-phosphatase 6q21 Chr6, NC_000006.12
(109691296..109825426)
134131 nt 24 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

4 MFN2/9927 mitofusin 2 1p36.22 Chr1, NC_000001.11
(11980444..12013508)
33065 nt 22 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

5 SH3TC2/79628 SH3 domain and tetratricopeptide repeats 2 5q32 Chr5, NC_000005.10
(148982150..149063062, complement)
80913 nt 17 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

6 HSPB8/26353 heat shock protein family B (small) member 8 12q24.23 Chr12, NC_000012.12
(119178931..119194746)
15816 nt 3 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

7 SBF2/81846 SET binding factor 2 11p15.4 Chr11, NC_000011.10
(9778668..10294219, complement)
515552 nt 44 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

8 GDAP1/54332 ganglioside induced differentiation associated protein 1 8q21.11 Chr8, NC_000008.11
(74350403..74488872)
138470 nt 8 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

9 KIF1B/23095 kinesin family member 1B 1p36.22 Chr1, NC_000001.11
(10210570..10381603)
171034 nt 52 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

10 PRX/57716 periaxin 19q13.2 Chr19, NC_000019.10
(40393764..40414789, complement)
21026 nt 8 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

11 TRPV4/59341 transient receptor potential cation channel subfamily V member 4 12q24.11 Chr12, NC_000012.12
(109783087..109833398, complement)
50312 nt 18 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

12 NDRG1/10397 N-myc downstream regulated 1 8q24.22 Chr8, NC_000008.11
(133237175..133297252, complement)
60078 nt 17 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

13 LITAF/9516 lipopolysaccharide induced TNF factor 16p13.13 Chr16, NC_000016.10
(11547722..11640317, complement)
92596 nt 13 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

14 YARS1/8565 tyrosyl-tRNA synthetase 1 1p35.1 Chr1, NC_000001.11
(32775239..32817358, complement)
42120 nt 13 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

15 MTMR2/8898 myotubularin related protein 2 11q21 Chr11, NC_000011.10
(95832880..95924107, complement)
91228 nt 21 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

16 DNM2/1785 dynamin 2 19p13.2 Chr19, NC_000019.10
(10718079..10831903)
113825 nt 22 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

17 RAB7A/7879 RAB7A, member RAS oncogene family 3q21.3 Chr3, NC_000003.12
(128726183..128814798)
88616 nt 6 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

18 HSPB1/3315 heat shock protein family B (small) member 1 7q11.23 Chr7, NC_000007.14
(76302673..76304292)
1620 nt 3 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

19 KARS1/3735 lysyl-tRNA synthetase 1 16q23.1 Chr16, NC_000016.10
(75627724..75647665, complement)
19942 nt 15 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

20 PMP22/5376 peripheral myelin protein 22 17p12 Chr17, NC_000017.11
(15229779..15265326, complement)
35548 nt 7 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

21 IGHMBP2/3508 immunoglobulin mu DNA binding protein 2 11q13.3 Chr11, NC_000011.10
(68903891..68940601)
36711 nt 18 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

22 GARS1/2617 glycyl-tRNA synthetase 1 7p14.3 Chr7, NC_000007.14
(30594735..30634033)
39299 nt 17 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

23 PRPS1/5631 phosphoribosyl pyrophosphate synthetase 1 Xq22.3 ChrX, NC_000023.11
(107628510..107651026)
22517 nt 7 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

24 GJB1/2705 gap junction protein beta 1 Xq13.1 ChrX, NC_000023.11
(71215239..71225516)
10278 nt 4 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

25 NEFL/4747 neurofilament light chain 8p21.2 Chr8, NC_000008.11
(24950955..24956612, complement)
5658 nt 4 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

26 MPZ/4359 myelin protein zero 1q23.3 Chr1, NC_000001.11
(161303600..161309968, complement)
6369 nt 7 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

27 LMNA/4000 lamin A/C 1q22 Chr1, NC_000001.11
(156082573..156140081)
57509 nt 17 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

28 EGR2/1959 early growth response 2 10q21.3 Chr10, NC_000010.11
(62811996..62819167, complement)
7172 nt 5 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

29 RETREG1/54463 reticulophagy regulator 1 5p15.1 Chr5, NC_000005.10
(16473053..16616997, complement)
143945 nt 12 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

30 DYNC1H1/1778 dynein cytoplasmic 1 heavy chain 1 14q32.31 Chr14, NC_000014.9
(101964573..102056443)
91871 nt 78 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

31 LRSAM1/90678 leucine rich repeat and sterile alpha motif containing 1 9q34.11 Chr9, NC_000009.12
(127451486..127503501)
52016 nt 27 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

32 INF2/64423 inverted formin 2 14q32.33 Chr14, NC_000014.9
(104689618..104722535)
32918 nt 23 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

33 DHTKD1/55526 dehydrogenase E1 and transketolase domain containing 1 10p14 Chr10, NC_000010.11
(12068954..12123221)
54268 nt 17 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

34 AIFM1/9131 apoptosis inducing factor mitochondria associated 1 Xq26.1 ChrX, NC_000023.11
(130129362..130165841, complement)
36480 nt 18 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

35 HK1/3098 hexokinase 1 10q22.1 Chr10, NC_000010.11
(69270000..69401882)
131883 nt 29 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

36 GNB4/59345 G protein subunit beta 4 3q26.33 Chr3, NC_000003.12
(179396088..179527798, complement)
131711 nt 14 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

37 SBF1/6305 SET binding factor 1 22q13.33 Chr22, NC_000022.11
(50445000..50475035, complement)
30036 nt 41 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

38 PDK3/5165 pyruvate dehydrogenase kinase 3 Xp22.11 ChrX, NC_000023.11
(24465286..24550466)
85181 nt 12 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

39 PLEKHG5/57449 pleckstrin homology and RhoGEF domain containing G5 1p36.31 Chr1, NC_000001.11
(6467122..6520092, complement)
52971 nt 28 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

40 TRIM2/23321 tripartite motif containing 2 4q31.3 Chr4, NC_000004.12
(153152163..153339317)
187155 nt 20 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

41 COX6A1/1337 cytochrome c oxidase subunit 6A1 12q24.31 Chr12, NC_000012.12
(120438113..120440730)
2618 nt 3 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

42 GAN/8139 gigaxonin 16q23.2 Chr16, NC_000016.10
(81314962..81390809)
75848 nt 11 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

43 ARHGEF10/9639 Rho guanine nucleotide exchange factor 10 8p23.3 Chr8, NC_000008.11
(1823300..1958641)
135342 nt 34 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

44 MARS1/4141 methionyl-tRNA synthetase 1 12q13.3 Chr12, NC_000012.12
(57488068..57516652)
28585 nt 21 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

45 NAGLU/4669 N-acetyl-alpha-glucosaminidase 17q21.2 Chr17, NC_000017.11
(42536241..42544449)
8209 nt 7 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

46 DNAJB2/3300 DnaJ heat shock protein family (Hsp40) member B2 2q35 Chr2, NC_000002.12
(219279366..219286895)
7530 nt 9 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

47 SPG11/80208 SPG11 vesicle trafficking associated, spatacsin 15q21.1 Chr15, NC_000015.10
(44562696..44663662, complement)
100967 nt 42 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

48 SURF1/6834 SURF1 cytochrome c oxidase assembly factor 9q34.2 Chr9, NC_000009.12
(133351758..133356487, complement)
4730 nt 9 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

49 VCP/7415 valosin containing protein 9p13.3 Chr9, NC_000009.12
(35056064..35072625, complement)
16562 nt 17 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

50 MORC2/22880 MORC family CW-type zinc finger 2 22q12.2 Chr22, NC_000022.11
(30925130..30968774, complement)
43645 nt 27 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

51 NEFH/4744 neurofilament heavy chain 22q12.2 Chr22, NC_000022.11
(29480218..29491390)
11173 nt 4 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

52 BSCL2/26580 BSCL2 lipid droplet biogenesis associated, seipin 11q12.3 Chr11, NC_000011.10
(62690262..62709537, complement)
19276 nt 13 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

53 MME/4311 membrane metalloendopeptidase 3q25.2 Chr3, NC_000003.12
(155024202..155183729)
159528 nt 29 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

54 ATP1A1/476 ATPase Na+/K+ transporting subunit alpha 1 1p13.1 Chr1, NC_000001.11
(116373244..116404774)
31531 nt 25 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

55 NTRK1/4914 neurotrophic receptor tyrosine kinase 1 1q23.1 Chr1, NC_000001.11
(156815750..156881850)
66101 nt 19 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

56 PMP2/5375 peripheral myelin protein 2 8q21.13 Chr8, NC_000008.11
(81440326..81447439, complement)
7114 nt 4 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

57 MPV17/4358 mitochondrial inner membrane protein MPV17 2p23.3 Chr2, NC_000002.12
(27309492..27323097, complement)
13606 nt 9 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

58 HINT1/3094 histidine triad nucleotide binding protein 1 5q23.3 Chr5, NC_000005.10
(131159027..131165256, complement)
6230 nt 5 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

59 WNK1/65125 WNK lysine deficient protein kinase 1 12p13.33 Chr12, NC_000012.12
(752579..911452)
158874 nt 31 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

60 SPTLC2/9517 serine palmitoyltransferase long chain base subunit 2 14q24.3 Chr14, NC_000014.9
(77505997..77616637, complement)
110641 nt 13 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

61 DNMT1/1786 DNA methyltransferase 1 19p13.2 Chr19, NC_000019.10
(10133346..10194953, complement)
61608 nt 41 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

62 SEPTIN9/10801 septin 9 17q25.3 Chr17, NC_000017.11
(77281499..77500596)
219098 nt 21 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

63 CADM3/57863 cell adhesion molecule 3 1q23.2 Chr1, NC_000001.11
(159171615..159203313)
31699 nt 12 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

64 HSPB3/8988 heat shock protein family B (small) member 3 5q11.2 Chr5, NC_000005.10
(54455699..54456377)
679 nt 1 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

65 KIF5A/3798 kinesin family member 5A 12q13.3 Chr12, NC_000012.12
(57550044..57586633)
36590 nt 29 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

66 SLC5A7/60482 solute carrier family 5 member 7 2q12.3 Chr2, NC_000002.12
(107986524..108013994)
27471 nt 10 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

67 JAG1/182 jagged canonical Notch ligand 1 20p12.2 Chr20, NC_000020.11
(10637684..10673999, complement)
36316 nt 26 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

68 POLR3B/55703 RNA polymerase III subunit B 12q23.3 Chr12, NC_000012.12
(106357748..106510198)
152451 nt 30 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

69 FBLN5/10516 fibulin 5 14q32.12 Chr14, NC_000014.9
(91869411..91947694, complement)
78284 nt 15 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

70 SLC12A6/9990 solute carrier family 12 member 6 15q14 Chr15, NC_000015.10
(34229784..34338057, complement)
108274 nt 28 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

71 ITPR3/3710 inositol 1,4,5-trisphosphate receptor type 3 6p21.31 Chr6, NC_000006.12
(33621322..33696562)
75241 nt 62 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

72 DHX9/1660 DExH-box helicase 9 1q25.3 Chr1, NC_000001.11
(182839347..182887982)
48636 nt 29 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

Variant Information
Disorder Cross-References:      Orphanet          OMIM                    GTR          MedGen          MalaCards          EMBL-EBI OLS    Monarch Initiative          NORD     

Patient care services
Clinical Symptoms & Disabilities

Prevalence
Under development