An
Autosomal recessive
mode(s) within the
Skin disorders
category
Graph displaying all Indian institutes, the rare genetic disorders they studied, and the variants submitted to ClinVar
Likely pathogenic
2
Pathogenic
2
Pathogenic/Likely pathogenic
3
| Variant name | Variant type | GRCH38 location | Germline classification | Molecular consequence | dbSNP_ID | Submitter |
|---|---|---|---|---|---|---|
| NM_000380.4(XPA):c.335_338delinsAAAGAATAC (p.Phe112_Met113delinsTer) | Indel | Chr9:97689585 - 97689588 | Likely pathogenic | Nonsense|non-coding transcript variant |
.Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India |
|
| NM_000380.4(XPA):c.331G>T (p.Glu111Ter) | Single nucleotide variant | Chr9:97689592 | Pathogenic | Nonsense|non-coding transcript variant | rs769255883 |
.Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India |
| NM_000380.4(XPA):c.428_429del (p.Glu143fs) | Microsatellite | Chr9:97687222 - 97687223 | Pathogenic/Likely pathogenic | Frameshift variant|non-coding transcript variant | rs1554701540 |
.Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India |
| NM_000380.4(XPA):c.648_649del (p.Lys217fs) | Deletion | Chr9:97684947 - 97684948 | Pathogenic/Likely pathogenic | Frameshift variant|non-coding transcript variant | rs1057519018 |
.Foundation for Research in Genetics and Endocrinology, FRIGE's Institute of Human Genetics .Neuberg Centre For Genomic Medicine, NCGM |
| NM_004628.5(XPC):c.398G>A (p.Trp133Ter) | Single nucleotide variant | Chr3:14170452 | Pathogenic | 5 prime UTR variant|nonsense|non-coding transcript variant |
.Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India |
|
| NM_004628.5(XPC):c.2420+2T>C | Single nucleotide variant | Chr3:14148560 | Pathogenic/Likely pathogenic | Splice donor variant | rs778987248 |
.Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India |
| NM_004628.5(XPC):c.2034-1G>A | Single nucleotide variant | Chr3:14152417 | Likely pathogenic | Splice acceptor variant | rs869025275 |
.Foundation for Research in Genetics and Endocrinology, FRIGE's Institute of Human Genetics |
Graph displaying all Indian institutes, the rare genetic disorders they studied, and the variants submitted to ClinVar