Spondyloepiphyseal dysplasia with congenital joint dislocations
An Autosomal recessive mode(s) within the Bone disorders category
Conflicting classifications of pathogenicity
2
Likely pathogenic
5
Pathogenic
2
Pathogenic/Likely pathogenic
1
| Variant name | Variant type | GRCH38 location | Germline classification | Molecular consequence | dbSNP_ID | Submitter |
|---|---|---|---|---|---|---|
| NM_004273.5(CHST3):c.857T>A (p.Leu286Gln) | Single nucleotide variant | Chr10:72007888 | Likely pathogenic | Missense variant | rs121908620 |
.Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India |
| NM_004273.5(CHST3):c.431G>A (p.Gly144Asp) | Single nucleotide variant | Chr10:72007462 | Likely pathogenic | Missense variant | rs865931042 |
.Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India |
| NM_004273.5(CHST3):c.768C>G (p.Asn256Lys) | Single nucleotide variant | Chr10:72007799 | Likely pathogenic | Missense variant | rs1416637363 |
.Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India |
| NM_004273.5(CHST3):c.500A>G (p.His167Arg) | Single nucleotide variant | Chr10:72007531 | Likely pathogenic | Missense variant | rs2131774841 |
.Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India |
| NM_004273.5(CHST3):c.430G>A (p.Gly144Ser) | Single nucleotide variant | Chr10:72007461 | Conflicting classifications of pathogenicity | Missense variant | rs1360950889 |
.Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India |
| NM_004273.5(CHST3):c.1165G>C (p.Ala389Pro) | Single nucleotide variant | Chr10:72008196 | Likely pathogenic | Missense variant | rs1003539672 |
.Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India |
| NM_004273.5(CHST3):c.688G>A (p.Glu230Lys) | Single nucleotide variant | Chr10:72007719 | Conflicting classifications of pathogenicity | Missense variant | rs774599785 |
.Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India |
| NM_004273.5(CHST3):c.491C>T (p.Pro164Leu) | Single nucleotide variant | Chr10:72007522 | Pathogenic | Missense variant | rs771866012 |
.Department of Medical Genetics, Sanjay Gandhi Post Graduate Institute of Medical Sciences |
| NM_004273.5(CHST3):c.904G>C (p.Asp302His) | Single nucleotide variant | Chr10:72007935 | Pathogenic | Missense variant | rs1316347883 |
.Department of Medical Genetics, Sanjay Gandhi Post Graduate Institute of Medical Sciences |
| NM_004273.5(CHST3):c.533dup (p.Ala179fs) | Duplication | Chr10:72007558 - 72007559 | Pathogenic/Likely pathogenic | Frameshift variant | rs769540174 |
.Department of Medical Genetics, Sanjay Gandhi Post Graduate Institute of Medical Sciences |
Indian Institutes & Variant Submission Overview
Chromosome-wise Variant Distribution