GenTIGSA Gene Database on Rare Genetic Disorders

Variants in ClinVar from 539 of 916 Rare Genetic Disorders of GenTIGS

Spondylocarpotarsal synostosis syndrome

An  Autosomal recessive  mode(s) within the Bone disorders  category

Likely pathogenic 3
Pathogenic 2
Pathogenic/Likely pathogenic 1
Uncertain significance 1

Variant name Variant type GRCH38 location Germline classification Molecular consequence dbSNP_ID Submitter
NM_001457.4(FLNB):c.28G>T (p.Glu10Ter) Single nucleotide variant Chr3:58008592 Likely pathogenic Nonsense .Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India
NM_001457.4(FLNB):c.6889-2A>G Single nucleotide variant Chr3:58159552 Likely pathogenic Splice acceptor variant .Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India
NM_001457.4(FLNB):c.7417+2T>A Single nucleotide variant Chr3:58168660 Likely pathogenic Splice donor variant .Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India
NM_001457.4(FLNB):c.2471T>C (p.Leu824Pro) Single nucleotide variant Chr3:58110157 Uncertain significance Missense variant rs2107121791 .Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India
NM_001457.4(FLNB):c.1243C>T (p.Arg415Ter) Single nucleotide variant Chr3:58098806 Pathogenic Nonsense rs775714153 .Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India
NM_001457.4(FLNB):c.1592dup (p.His532fs) Duplication Chr3:58104060 - 58104061 Pathogenic Frameshift variant rs746105983 .Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India
NM_002470.4(MYH3):c.-9+1G>A Single nucleotide variant Chr17:10656089 Pathogenic/Likely pathogenic Splice donor variant rs557849165 .Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India

Indian Institutes & Variant Submission Overview
Chromosome-wise Variant Distribution