Short-rib thoracic dysplasia 6 with or without polydactyly
An Autosomal recessive, Digenic recessive mode(s) within the Bone disorders category
Likely pathogenic
1
Pathogenic
4
| Variant name | Variant type | GRCH38 location | Germline classification | Molecular consequence | dbSNP_ID | Submitter |
|---|---|---|---|---|---|---|
| NM_001199397.3(NEK1):c.1238dup (p.Ser414fs) | Duplication | Chr4:169561507 - 169561508 | Pathogenic | Frameshift variant|non-coding transcript variant|intron variant |
.Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India |
|
| NM_001199397.3(NEK1):c.213del (p.Glu72fs) | Deletion | Chr4:169602009 | Pathogenic | Frameshift variant|non-coding transcript variant | rs2150139071 |
.Institute of Medical Genetics and Genomics, Sir Ganga Ram Hospital |
| NM_001199397.3(NEK1):c.3391G>C (p.Asp1131His) | Single nucleotide variant | Chr4:169401844 | Likely pathogenic | Missense variant|non-coding transcript variant | rs2111032650 |
.Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India |
| NM_001199397.3(NEK1):c.1957C>T (p.Arg653Ter) | Single nucleotide variant | Chr4:169507087 | Pathogenic | Nonsense|non-coding transcript variant|intron variant | rs773156346 |
.Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India |
| NM_001199397.3(NEK1):c.3337G>T (p.Glu1113Ter) | Single nucleotide variant | Chr4:169406633 | Pathogenic | Nonsense|non-coding transcript variant | rs1732670701 |
.Diagnostics Division, CENTRE FOR DNA FINGERPRINTING AND DIAGNOSTICS |
Indian Institutes & Variant Submission Overview
Chromosome-wise Variant Distribution