GenTIGSA Gene Database on Rare Genetic Disorders
  Beta Version

Variants from 536 rare genetic disorders, with a total of 897 reported, submitted from India

Cornelia de Lange syndrome 1

An  Autosomal dominant  mode(s) within the Multisystemic disorders  category

Likely pathogenic 4
Pathogenic 2
Pathogenic/Likely pathogenic 1
Uncertain significance 2

Variant name Variant type GRCH38 location Germline classification Molecular consequence dbSNP_ID Submitter
NM_133433.4(NIPBL):c.4226_4227del (p.Thr1409fs) Microsatellite Chr5:37007458 - 37007459 Pathogenic Frameshift variant rs2478158664 .Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India
NM_133433.4(NIPBL):c.4455G>A (p.Met1485Ile) Single nucleotide variant Chr5:37010120 Uncertain significance Missense variant rs2478190071 .Division of Medical Genetics, Department of Pediatrics, All India Institute of Medical Sciences, New Delhi
NM_133433.4(NIPBL):c.551dup (p.Gly185fs) Duplication Chr5:36962214 - 36962215 Likely pathogenic Frameshift variant rs2479033684 .Lifecell International Pvt. Ltd
NM_133433.4(NIPBL):c.328A>T (p.Lys110Ter) Single nucleotide variant Chr5:36958201 Likely pathogenic Nonsense rs2479004915 .Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India
NM_133433.4(NIPBL):c.4560+4A>G Single nucleotide variant Chr5:37010229 Likely pathogenic Intron variant rs2478191869 .Department of Medical Genetics, Sanjay Gandhi Post Graduate Institute of Medical Sciences
NM_133433.3(NIPBL):c.3856-?_4239+?del Deletion Chr: Uncertain significance .Foundation for Research in Genetics and Endocrinology, FRIGE's Institute of Human Genetics
NM_133433.4(NIPBL):c.7168G>A (p.Ala2390Thr) Single nucleotide variant Chr5:37052471 Pathogenic/Likely pathogenic Missense variant rs587784036 .Foundation for Research in Genetics and Endocrinology, FRIGE's Institute of Human Genetics
NM_133433.4(NIPBL):c.5456G>A (p.Arg1819Gln) Single nucleotide variant Chr5:37022272 Likely pathogenic Missense variant rs80358366 .Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India
NM_133433.4(NIPBL):c.2479_2480del (p.Arg827fs) Deletion Chr5:36985659 - 36985660 Pathogenic Frameshift variant rs398124465 .Foundation for Research in Genetics and Endocrinology, FRIGE's Institute of Human Genetics

Graph displaying all Indian institutes, the rare genetic disorders they studied, and the variants submitted to ClinVar