GenTIGSA Gene Database on Rare Genetic Disorders
  Beta Version

Lists of Rare Genetic Disorders  

Prader-willi Syndrome 
An Autosomal dominant mode(s) within the Neurodevelopmental disorders category
Reported Pathogenic variants
Candidate Gene Information
S.No. Name/GeneID Description Cytogentic Band Gene Location on genomic DNA Gene Length Exons Details Gene Cross-References
1 HERC2/8924 HECT and RLD domain containing E3 ubiquitin protein ligase 2 15q13.1 Chr15, NC_000015.10
(28111040..28322179, complement)
211140 nt 98 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

2 IPW/3653 imprinted in Prader-Willi syndrome Chr15, NC_000015.10
(25116545..25122476)
5932 nt 3 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

3 MAGEL2/54551 MAGE family member L2 15q11.2 Chr15, NC_000015.10
(23643549..23647867, complement)
4319 nt 1 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

4 MKRN3/7681 makorin ring finger protein 3 15q11.2 Chr15, NC_000015.10
(23565674..23568044)
2371 nt 1 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

5 SNORD115-1/338433 small nucleolar RNA, C/D box 115-1 Chr15, NC_000015.10
(25170723..25170804)
82 nt 1 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

6 SNRPN/6638 small nuclear ribonucleoprotein polypeptide N 15q11.2 Chr15, NC_000015.10
(24823637..24978723)
155087 nt 34 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

7 NPAP1/23742 nuclear pore associated protein 1 15q11.2 Chr15, NC_000015.10
(24675775..24683393)
7619 nt 1 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

8 PWAR1/145624 Prader Willi/Angelman region RNA 1 Chr15, NC_000015.10
(25135642..25138053)
2412 nt 1 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

9 PWRN1/791114 Prader-Willi region non-protein coding RNA 1 Chr15, NC_000015.10
(24558157..24587780)
29624 nt 9 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

10 SNORD116-1/100033413 small nucleolar RNA, C/D box 116-1 Chr15, NC_000015.10
(25051476..25051572)
97 nt 1 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

Variant Information    
Disorder Cross-References:      Orphanet          OMIM                    GTR          MedGen          MalaCards          EMBL-EBI OLS    Monarch Initiative          NORD     

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