GenTIGSA Gene Database on Rare Genetic Disorders
  Beta Version

Lists of Rare Genetic Disorders  

Long QT Syndrome 
An Autosomal dominant mode(s) within the Cardiovascular disorders category
Reported Pathogenic variants
Candidate Gene Information
S.No. Name/GeneID Description Cytogentic Band Gene Location on genomic DNA Gene Length Exons Details Gene Cross-References
1 SCN4B/6330 sodium voltage-gated channel beta subunit 4 11q23.3 Chr11, NC_000011.10
(118133377..118152823, complement)
19447 nt 5 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

2 KCNQ1/3784 potassium voltage-gated channel subfamily Q member 1 11p15.5 Chr11, NC_000011.10
(2445008..2849105)
404098 nt 19 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

3 AKAP9/10142 A-kinase anchoring protein 9 7q21.2 Chr7, NC_000007.14
(91940862..92110673)
169812 nt 51 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

4 KCNE2/9992 potassium voltage-gated channel subfamily E regulatory subunit 2 21q22.11 Chr21, NC_000021.9
(34364006..34371381)
7376 nt 2 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

5 CAV3/859 caveolin 3 3p25.3 Chr3, NC_000003.12
(8733802..8746758)
12957 nt 2 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

6 SNTA1/6640 syntrophin alpha 1 20q11.21 Chr20, NC_000020.11
(33407957..33443763, complement)
35807 nt 9 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

7 KCNJ5/3762 potassium inwardly rectifying channel subfamily J member 5 11q24.3 Chr11, NC_000011.10
(128891356..128921163)
29808 nt 5 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

8 SCN5A/6331 sodium voltage-gated channel alpha subunit 5 3p22.2 Chr3, NC_000003.12
(38548062..38649687, complement)
101626 nt 29 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

9 KCNE1/3753 potassium voltage-gated channel subfamily E regulatory subunit 1 21q22.12 Chr21, NC_000021.9
(34446688..34512210, complement)
65523 nt 7 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

10 KCNH2/3757 potassium voltage-gated channel subfamily H member 2 7q36.1 Chr7, NC_000007.14
(150944961..150978321, complement)
33361 nt 20 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

11 ANK2/287 ankyrin 2 4q26 Chr4, NC_000004.12
(112705622..113383736)
678115 nt 61 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

12 CALM2/805 calmodulin 2 2p21 Chr2, NC_000002.12
(47160082..47176936, complement)
16855 nt 8 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

13 CACNA1C/775 calcium voltage-gated channel subunit alpha1 C 12p13.33 Chr12, NC_000012.12
(1970780..2697950)
727171 nt 57 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

14 KCNJ2/3759 potassium inwardly rectifying channel subfamily J member 2 17q24.3 Chr17, NC_000017.11
(70169532..70180044)
10513 nt 2 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

15 RYR2/6262 ryanodine receptor 2 1q43 Chr1, NC_000001.11
(237042184..237833988)
791805 nt 107 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

16 TRPM4/54795 transient receptor potential cation channel subfamily M member 4 19q13.33 Chr19, NC_000019.10
(49157792..49211836)
54045 nt 25 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

17 CALM1/801 calmodulin 1 14q32.11 Chr14, NC_000014.9
(90396502..90408268)
11767 nt 8 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

18 PKP2/5318 plakophilin 2 12p11.21 Chr12, NC_000012.12
(32790755..32896777, complement)
106023 nt 15 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

19 CALM3/808 calmodulin 3 19q13.32 Chr19, NC_000019.10
(46601074..46610782)
9709 nt 9 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

20 MYPN/84665 myopalladin 10q21.3 Chr10, NC_000010.11
(68087897..68212017)
124121 nt 28 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

21 RNF207/388591 ring finger protein 207 1p36.31 Chr1, NC_000001.11
(6206119..6221299)
15181 nt 19 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

22 CACNA1S/779 calcium voltage-gated channel subunit alpha1 S 1q32.1 Chr1, NC_000001.11
(201039512..201112426, complement)
72915 nt 44 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

23 MYH6/4624 myosin heavy chain 6 14q11.2 Chr14, NC_000014.9
(23381987..23408273, complement)
26287 nt 39 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

24 MYBPC3/4607 myosin binding protein C3 11p11.2 Chr11, NC_000011.10
(47331406..47352702, complement)
21297 nt 35 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

25 DSG2/1829 desmoglein 2 18q12.1 Chr18, NC_000018.10
(31498177..31549008)
50832 nt 16 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

26 CTNNA3/29119 catenin alpha 3 10q21.3 Chr10, NC_000010.11
(65912523..67763594, complement)
1851072 nt 27 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

Variant Information
Disorder Cross-References:                GTR          MedGen          MalaCards          EMBL-EBI OLS    Monarch Initiative          NORD     

Patient care services
Clinical Symptoms & Disabilities

Prevalence
Under development