GenTIGSA Gene Database on Rare Genetic Disorders
  Beta Version

Lists of Rare Genetic Disorders      

Congenital Disorder Of Glycosylation(Carbohydrate-deficient glycoprotein syndrome) 
An Autosomal recessive mode(s) within the Metabolic disorders category
Reported Pathogenic variants
Candidate Gene Information
S.No. Name/GeneID Description Cytogentic Band Gene Location on genomic DNA Gene Length Exons Details Gene Cross-References
1 ALG2/85365 ALG2 alpha-1,3/1,6-mannosyltransferase 9q22.33 Chr9, NC_000009.12
(99216425..99221942, complement)
5518 nt 3 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

2 DPM1/8813 dolichyl-phosphate mannosyltransferase subunit 1, catalytic 20q13.13 Chr20, NC_000020.11
(50934855..50958564, complement)
23710 nt 10 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

3 DDOST/1650 dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit 1p36.12 Chr1, NC_000001.11
(20651777..20661369, complement)
9593 nt 11 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

4 NUS1/116150 NUS1 dehydrodolichyl diphosphate synthase subunit 6q22.1 Chr6, NC_000006.12
(117675469..117710727)
35259 nt 5 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

5 PGM1/5236 phosphoglucomutase 1 1p31.3 Chr1, NC_000001.11
(63593411..63660245)
66835 nt 13 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

6 ALG3/10195 ALG3 alpha-1,3- mannosyltransferase 3q27.1 Chr3, NC_000003.12
(184242301..184249525, complement)
7225 nt 10 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

7 TUSC3/7991 tumor suppressor candidate 3 8p22 Chr8, NC_000008.11
(15417188..15852091)
434904 nt 23 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

8 DPAGT1/1798 dolichyl-phosphate N-acetylglucosaminephosphotransferase 1 11q23.3 Chr11, NC_000011.10
(119093874..119101853, complement)
7980 nt 10 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

9 ALG8/79053 ALG8 alpha-1,3-glucosyltransferase 11q14.1 Chr11, NC_000011.10
(78100946..78139626, complement)
38681 nt 14 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

10 ALG9/79796 ALG9 alpha-1,2-mannosyltransferase 11q23.1 Chr11, NC_000011.10
(111768025..111871581, complement)
103557 nt 27 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

11 COG6/57511 component of oligomeric golgi complex 6 13q14.11 Chr13, NC_000013.11
(39655627..39791666)
136040 nt 22 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

12 MGAT2/4247 alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase 14q21.3 Chr14, NC_000014.9
(49620799..49623481)
2683 nt 1 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

13 COG7/91949 component of oligomeric golgi complex 7 16p12.2 Chr16, NC_000016.10
(23388493..23453189, complement)
64697 nt 18 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

14 COG8/84342 component of oligomeric golgi complex 8 16q22.1 Chr16, NC_000016.10
(69326428..69339564, complement)
13137 nt 7 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

15 MPDU1/9526 mannose-P-dolichol utilization defect 1 17p13.1 Chr17, NC_000017.11
(7583647..7588212)
4566 nt 7 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

16 COG2/22796 component of oligomeric golgi complex 2 1q42.2 Chr1, NC_000001.11
(230642481..230693982)
51502 nt 18 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

17 DHDDS/79947 dehydrodolichyl diphosphate synthase subunit 1p36.11 Chr1, NC_000001.11
(26432321..26471306)
38986 nt 9 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

18 FUT8/2530 fucosyltransferase 8 14q23.3 Chr14, NC_000014.9
(65356842..65744121)
387280 nt 20 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

19 RPN2/6185 ribophorin II 20q11.23 Chr20, NC_000020.11
(37179330..37241619)
62290 nt 19 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

20 FCSK/197258 fucose kinase 16q22.1 Chr16, NC_000016.10
(70454595..70480274)
25680 nt 24 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

21 MAGT1/84061 magnesium transporter 1 Xq21.1 ChrX, NC_000023.11
(77825747..77895568, complement)
69822 nt 10 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

22 SRD5A3/79644 steroid 5 alpha-reductase 3 4q12 Chr4, NC_000004.12
(55346242..55373100)
26859 nt 6 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

23 ALG1/56052 ALG1 chitobiosyldiphosphodolichol beta-mannosyltransferase 16p13.3 Chr16, NC_000016.10
(5071843..5087379)
15537 nt 14 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

24 ATP6AP2/10159 ATPase H+ transporting accessory protein 2 Xp11.4 ChrX, NC_000023.11
(40580970..40606848)
25879 nt 9 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

25 GALNT2/2590 polypeptide N-acetylgalactosaminyltransferase 2 1q42.13 Chr1, NC_000001.11
(230057789..230282122)
224334 nt 19 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

26 SSR3/6747 signal sequence receptor subunit 3 3q25.31 Chr3, NC_000003.12
(156539553..156555117, complement)
15565 nt 7 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

27 SLC37A4/2542 solute carrier family 37 member 4 11q23.3 Chr11, NC_000011.10
(119024112..119030877, complement)
6766 nt 12 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

28 ALG13/79868 ALG13 UDP-N-acetylglucosaminyltransferase subunit Xq23 ChrX, NC_000023.11
(111681170..111760649)
79480 nt 35 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

29 EDEM3/80267 ER degradation enhancing alpha-mannosidase like protein 3 1q25.3 Chr1, NC_000001.11
(184690237..184754858, complement)
64622 nt 21 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

30 STT3A/3703 STT3 oligosaccharyltransferase complex catalytic subunit A 11q24.2 Chr11, NC_000011.10
(125591769..125623091)
31323 nt 22 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

31 SLC35A2/7355 solute carrier family 35 member A2 Xp11.23 ChrX, NC_000023.11
(48903183..48911958, complement)
8776 nt 6 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

32 CAMLG/819 calcium modulating ligand 5q31.1 Chr5, NC_000005.10
(134738548..134752157)
13610 nt 4 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

33 COG3/83548 component of oligomeric golgi complex 3 13q14.13 Chr13, NC_000013.11
(45464939..45536701)
71763 nt 24 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

34 CACNA1D/776 calcium voltage-gated channel subunit alpha1 D 3p21.1 Chr3, NC_000003.12
(53494611..53813733)
319123 nt 55 More... OMIM gene
gnomAD browser
EnsEMBL
GeneCards
ClinGen gene

Variant Information
Disorder Cross-References:                GTR          MalaCards          NORD     

Patient care services
Clinical Symptoms & Disabilities

Prevalence
Under development