GenTIGSA Gene Database on Rare Genetic Disorders

Variants in ClinVar from 539 of 916 Rare Genetic Disorders of GenTIGS

Vitamin D-dependent rickets, type 1A

An  Autosomal recessive  mode(s) within the Metabolic disorders  category

Likely pathogenic 2
Pathogenic 2
Uncertain significance 1

Variant name Variant type GRCH38 location Germline classification Molecular consequence dbSNP_ID Submitter
NM_000785.4(CYP27B1):c.1232G>A (p.Cys411Tyr) Single nucleotide variant Chr12:57763792 Likely pathogenic Missense variant rs2140396224 .Laboratory of Cyto-molecular Genetics, Department of Anatomy, All India Institute of Medical Sciences (AIIMS), New Delhi
NM_000785.4(CYP27B1):c.386C>T (p.Ala129Val) Single nucleotide variant Chr12:57766007 Likely pathogenic Missense variant rs2140397587 .Laboratory of Cyto-molecular Genetics, Department of Anatomy, All India Institute of Medical Sciences (AIIMS), New Delhi
NM_000785.4(CYP27B1):c.974C>T (p.Thr325Met) Single nucleotide variant Chr12:57764540 Uncertain significance Missense variant rs762118198 .Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India
NM_000785.4(CYP27B1):c.171dup (p.Leu58fs) Duplication Chr12:57766870 - 57766871 Pathogenic Frameshift variant rs763437121 .Laboratory of Cyto-molecular Genetics, Department of Anatomy, All India Institute of Medical Sciences (AIIMS), New Delhi
.Neuberg Centre For Genomic Medicine, NCGM
NM_000785.4(CYP27B1):c.1319_1325dup (p.Phe443fs) Microsatellite Chr12:57763698 - 57763699 Pathogenic Frameshift variant rs780950819|rs780950918 .Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India

Indian Institutes & Variant Submission Overview
Chromosome-wise Variant Distribution