GenTIGSA Gene Database on Rare Genetic Disorders

Variants in ClinVar from 539 of 916 Rare Genetic Disorders of GenTIGS

Usher syndrome

An  Autosomal recessive  mode(s) within the Eye disorders / Ear disorders  category

Conflicting classifications of pathogenicity 1
Pathogenic 2
Pathogenic/Likely pathogenic 3
Uncertain significance 1

Variant name Variant type GRCH38 location Germline classification Molecular consequence dbSNP_ID Submitter
NM_032119.4(ADGRV1):c.1608C>G (p.Tyr536Ter) Single nucleotide variant Chr5:90629308 Pathogenic Nonsense|non-coding transcript variant rs1561416879 .Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India
NM_000260.4(MYO7A):c.5648G>A (p.Arg1883Gln) Single nucleotide variant Chr11:77206108 Pathogenic/Likely pathogenic Missense variant rs111033215 .Foundation for Research in Genetics and Endocrinology, FRIGE's Institute of Human Genetics
.Neuberg Centre For Genomic Medicine, NCGM
NM_000260.4(MYO7A):c.496del (p.Glu166fs) Deletion Chr11:77156684 Pathogenic Frameshift variant rs111033448 .Foundation for Research in Genetics and Endocrinology, FRIGE's Institute of Human Genetics
NM_000260.4(MYO7A):c.1900C>T (p.Arg634Ter) Single nucleotide variant Chr11:77172850 Pathogenic/Likely pathogenic Nonsense rs111033180 .Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India
NM_206933.4(USH2A):c.675_678del (p.Phe225fs) Deletion Chr1:216365059 - 216365062 Pathogenic/Likely pathogenic Frameshift variant rs2102708663 .Lifecell International Pvt. Ltd
NM_206933.4(USH2A):c.11189A>G (p.Glu3730Gly) Single nucleotide variant Chr1:215759702 Conflicting classifications of pathogenicity Missense variant rs1341032857 .Foundation for Research in Genetics and Endocrinology, FRIGE's Institute of Human Genetics
NM_206933.4(USH2A):c.6730G>A (p.Val2244Met) Single nucleotide variant Chr1:215993095 Uncertain significance Missense variant rs550772689 .Foundation for Research in Genetics and Endocrinology, FRIGE's Institute of Human Genetics
.Neuberg Centre For Genomic Medicine, NCGM
.SN ONGC Dept of Genetics and Molecular biology Vision Research Foundation

Indian Institutes & Variant Submission Overview
Chromosome-wise Variant Distribution