GenTIGSA Gene Database on Rare Genetic Disorders
  Beta Version

Variants from 536 rare genetic disorders, with a total of 897 reported, submitted from India

Sphingolipid activator protein 1 deficiency

An  Autosomal recessive  mode(s) within the Metabolic disorders  category

Conflicting classifications of pathogenicity 1
Pathogenic 1
Pathogenic/Likely pathogenic 1

Variant name Variant type GRCH38 location Germline classification Molecular consequence dbSNP_ID Submitter
NM_002778.4(PSAP):c.777_778insTGT (p.Met259_Gln260insCys) Insertion Chr10:71825836 - 71825837 Conflicting classifications of pathogenicity Inframe_insertion rs2494516617 .Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India
NM_002778.4(PSAP):c.721T>G (p.Cys241Gly) Single nucleotide variant Chr10:71825893 Pathogenic Missense variant rs1842392268 .Department of Medical Genetics, Sanjay Gandhi Post Graduate Institute of Medical Sciences
NM_002778.4(PSAP):c.679_681del (p.Lys227del) Deletion Chr10:71828053 - 71828055 Pathogenic/Likely pathogenic Inframe_deletion rs1431844269 .Foundation for Research in Genetics and Endocrinology, FRIGE's Institute of Human Genetics
.Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India
.Neuberg Centre For Genomic Medicine, NCGM

Graph displaying all Indian institutes, the rare genetic disorders they studied, and the variants submitted to ClinVar