GenTIGSA Gene Database on Rare Genetic Disorders

Variants in ClinVar from 539 of 916 Rare Genetic Disorders of GenTIGS

Smith-Lemli-Opitz syndrome

An  Autosomal recessive  mode(s) within the Metabolic disorders  category

Pathogenic/Likely pathogenic 3

Variant name Variant type GRCH38 location Germline classification Molecular consequence dbSNP_ID Submitter
NM_000083.3(CLCN1):c.1437_1450del (p.Pro480fs) Deletion Chr7:143339287 - 143339300 Pathogenic/Likely pathogenic Frameshift variant|non-coding transcript variant rs768119034
NM_001360.3(DHCR7):c.725G>A (p.Arg242His) Single nucleotide variant Chr11:71438985 Pathogenic/Likely pathogenic Missense variant rs80338857 .Lifecell International Pvt. Ltd
NM_001360.3(DHCR7):c.278C>T (p.Thr93Met) Single nucleotide variant Chr11:71444036 Pathogenic/Likely pathogenic Missense variant rs80338853 .Lifecell International Pvt. Ltd

Indian Institutes & Variant Submission Overview
Chromosome-wise Variant Distribution