GenTIGSA Gene Database on Rare Genetic Disorders

Variants in ClinVar from 539 of 916 Rare Genetic Disorders of GenTIGS

Pyridoxine-dependent epilepsy

An  Autosomal recessive  mode(s) within the Metabolic disorders  category

Conflicting classifications of pathogenicity 2
Pathogenic 4
Pathogenic/Likely pathogenic 1

Variant name Variant type GRCH38 location Germline classification Molecular consequence dbSNP_ID Submitter
NM_001182.5(ALDH7A1):c.1411_1412insG (p.Leu471fs) Insertion Chr5:126550199 - 126550200 Pathogenic Frameshift variant rs772766995 .Institute of Medical Genetics and Genomics, Sir Ganga Ram Hospital
.Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India
NM_001182.5(ALDH7A1):c.187G>T (p.Gly63Ter) Single nucleotide variant Chr5:126595012 Pathogenic Nonsense rs760636660 .Institute of Medical Genetics and Genomics, Sir Ganga Ram Hospital
.Neuberg Centre For Genomic Medicine, NCGM
NM_001182.5(ALDH7A1):c.1292C>T (p.Pro431Leu) Single nucleotide variant Chr5:126552046 Pathogenic/Likely pathogenic Missense variant rs151107837 .Lifecell International Pvt. Ltd
NM_001182.5(ALDH7A1):c.1003C>T (p.Arg335Ter) Single nucleotide variant Chr5:126559245 Pathogenic Nonsense rs1015686016 .Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India
NM_001182.5(ALDH7A1):c.1556G>A (p.Arg519Lys) Single nucleotide variant Chr5:126546333 Conflicting classifications of pathogenicity Missense variant rs561343926 .Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India
.Lifecell International Pvt. Ltd
NM_001182.5(ALDH7A1):c.947dup (p.Ser317fs) Duplication Chr5:126559300 - 126559301 Pathogenic Frameshift variant rs778003597 .Lifecell International Pvt. Ltd
NM_001182.5(ALDH7A1):c.1232C>T (p.Pro411Leu) Single nucleotide variant Chr5:126552106 Conflicting classifications of pathogenicity Missense variant rs780233639 .Foundation for Research in Genetics and Endocrinology, FRIGE's Institute of Human Genetics

Indian Institutes & Variant Submission Overview
Chromosome-wise Variant Distribution