GenTIGSA Gene Database on Rare Genetic Disorders

Variants in ClinVar from 539 of 916 Rare Genetic Disorders of GenTIGS

Progressive myoclonic epilepsy

An   mode(s) within the Neurodegenerative disorders  category

Conflicting classifications of pathogenicity 2
Likely pathogenic 2
Pathogenic 1
Pathogenic/Likely pathogenic 1
Uncertain significance 2

Variant name Variant type GRCH38 location Germline classification Molecular consequence dbSNP_ID Submitter
NM_005670.4(EPM2A):c.179G>A (p.Trp60Ter) Single nucleotide variant Chr6:145735320 Pathogenic/Likely pathogenic Nonsense|5 prime UTR variant|intron variant rs1332729329 .Pediatrics Genetics, Post Graduate Institute of Medical Education and Research
NM_153033.5(KCTD7):c.518T>A (p.Ile173Asn) Single nucleotide variant Chr7:66638880 Uncertain significance Missense variant rs2535251142 .Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India
NM_153033.5(KCTD7):c.207_214del (p.Cys71fs) Deletion Chr7:66633335 - 66633342 Likely pathogenic Frameshift variant rs2535241170 .Lifecell International Pvt. Ltd
NM_153033.5(KCTD7):c.205C>G (p.Leu69Val) Single nucleotide variant Chr7:66633335 Pathogenic Missense variant rs2116763829 .Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India
NM_153033.5(KCTD7):c.458G>C (p.Arg153Pro) Single nucleotide variant Chr7:66638396 Likely pathogenic Missense variant rs765235486 .Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India
NM_153033.5(KCTD7):c.208C>T (p.Arg70Trp) Single nucleotide variant Chr7:66633338 Conflicting classifications of pathogenicity Missense variant rs867319899 .Human Genome Lab, NIMHANS, National Institute of Mental Health and Neuro Sciences
NM_153033.5(KCTD7):c.302G>A (p.Gly101Asp) Single nucleotide variant Chr7:66633432 Uncertain significance Missense variant rs1554397831 .Foundation for Research in Genetics and Endocrinology, FRIGE's Institute of Human Genetics
NM_153033.5(KCTD7):c.280C>T (p.Arg94Trp) Single nucleotide variant Chr7:66633410 Conflicting classifications of pathogenicity Missense variant rs387907260 .Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India

Indian Institutes & Variant Submission Overview
Chromosome-wise Variant Distribution