An
Autosomal recessive
mode(s) within the
Eye disorders
category
Conflicting classifications of pathogenicity
3
Likely pathogenic
4
Pathogenic/Likely pathogenic
2
Uncertain significance
1
| Variant name | Variant type | GRCH38 location | Germline classification | Molecular consequence | dbSNP_ID | Submitter |
|---|---|---|---|---|---|---|
| NM_025114.4(CEP290):c.4805C>T (p.Thr1602Met) | Single nucleotide variant | Chr12:88083854 | Conflicting classifications of pathogenicity | Missense variant | rs369451049 |
.Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India .Neuberg Centre For Genomic Medicine, NCGM |
| NM_025114.4(CEP290):c.5745dup (p.Lys1916Ter) | Duplication | Chr12:88071890 - 88071891 | Pathogenic/Likely pathogenic | Nonsense | rs751361090 |
.Foundation for Research in Genetics and Endocrinology, FRIGE's Institute of Human Genetics |
| NM_025114.4(CEP290):c.5668G>T (p.Gly1890Ter) | Single nucleotide variant | Chr12:88077263 | Pathogenic/Likely pathogenic | Nonsense | rs137852832 |
.Institute of Medical Genetics and Genomics, Sir Ganga Ram Hospital .Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India .Neuberg Centre For Genomic Medicine, NCGM .Suma Genomics |
| NM_152443.3(RDH12):c.693_694insACTGCGTCCGCTCTGAGCTGGC (p.Val232fs) | Insertion | Chr14:67729222 - 67729223 | Likely pathogenic | Frameshift variant |
.SN ONGC Dept of Genetics and Molecular biology Vision Research Foundation |
|
| NM_000180.4(GUCY2D):c.2210AAG[1] (p.Glu738del) | Microsatellite | Chr17:8013199 - 8013201 | Likely pathogenic | Inframe_deletion | rs2151802832 |
.Pediatric Genetics, Postgraduate Institute of Medical Education and Research, Chandigarh (PGIMER) |
| NM_000180.4(GUCY2D):c.1937T>C (p.Leu646Pro) | Single nucleotide variant | Chr17:8012331 | Likely pathogenic | Missense variant | rs1975868606 |
.Pediatrics Genetics, Post Graduate Institute of Medical Education and Research |
| NM_004744.5(LRAT):c.*98C>T | Single nucleotide variant | Chr4:154749234 | Conflicting classifications of pathogenicity | 3 prime UTR variant | rs529360609 |
.Diagnostics Services (NGS), CSIR - Centre For Cellular And Molecular Biology |
| NM_017777.4(MKS1):c.958G>A (p.Val320Ile) | Single nucleotide variant | Chr17:58210980 | Conflicting classifications of pathogenicity | Missense variant | rs386834053 |
.Diagnostics Division, CENTRE FOR DNA FINGERPRINTING AND DIAGNOSTICS |
| NM_020366.4(RPGRIP1):c.903_906+17del | Deletion | Chr14:21307830 - 21307850 | Likely pathogenic | Splice donor variant | rs886039911 |
.Diagnostics Division, CENTRE FOR DNA FINGERPRINTING AND DIAGNOSTICS |
| NM_001346022.3(USP45):c.1636A>T (p.Lys546Ter) | Single nucleotide variant | Chr6:99446136 | Uncertain significance | Nonsense|non-coding transcript variant | rs189281869 |
.Foundation for Research in Genetics and Endocrinology, FRIGE's Institute of Human Genetics |
Indian Institutes & Variant Submission Overview
Chromosome-wise Variant Distribution