An
Autosomal recessive
mode(s) within the
Metabolic disorders/Lysosomal storage disorders
category
Likely pathogenic
3
Pathogenic
6
Pathogenic/Likely pathogenic
4
Uncertain significance
2
| Variant name | Variant type | GRCH38 location | Germline classification | Molecular consequence | dbSNP_ID | Submitter |
|---|---|---|---|---|---|---|
| NM_000404.3(GLB1):c.[276G>A];[75+5G>C] | CompoundHeterozygote | Chr: | Likely pathogenic |
.Foundation for Research in Genetics and Endocrinology, FRIGE's Institute of Human Genetics |
||
| NM_000404.4(GLB1):c.1099C>T (p.Pro367Ser) | Single nucleotide variant | Chr3:33024295 | Uncertain significance | Missense variant | rs1697636883 |
.Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India |
| NM_000404.4(GLB1):c.266A>T (p.His89Leu) | Single nucleotide variant | Chr3:33068950 | Pathogenic | Missense variant|intron variant | rs2125548832 |
.Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India |
| NM_000404.4(GLB1):c.425_428del (p.Lys142fs) | Deletion | Chr3:33068259 - 33068262 | Pathogenic | Frameshift variant|intron variant | rs1699765928 |
.Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India |
| NM_000404.4(GLB1):c.1010T>C (p.Leu337Pro) | Single nucleotide variant | Chr3:33046178 | Pathogenic/Likely pathogenic | Missense variant | rs752177002 |
.Foundation for Research in Genetics and Endocrinology, FRIGE's Institute of Human Genetics .Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India |
| NM_000404.4(GLB1):c.407C>T (p.Pro136Leu) | Single nucleotide variant | Chr3:33068280 | Likely pathogenic | Missense variant|intron variant | rs1575471281 |
.Foundation for Research in Genetics and Endocrinology, FRIGE's Institute of Human Genetics |
| NM_000404.4(GLB1):c.385G>C (p.Glu129Gln) | Single nucleotide variant | Chr3:33068831 | Likely pathogenic | Missense variant|intron variant | rs886042079 |
.Foundation for Research in Genetics and Endocrinology, FRIGE's Institute of Human Genetics |
| NM_000404.4(GLB1):c.545C>G (p.Thr182Arg) | Single nucleotide variant | Chr3:33065470 | Uncertain significance | Missense variant | rs758577863 |
.Foundation for Research in Genetics and Endocrinology, FRIGE's Institute of Human Genetics |
| NM_000404.4(GLB1):c.65_75+1del | Deletion | Chr3:33097010 - 33097021 | Pathogenic/Likely pathogenic | 5 prime UTR variant|splice donor variant | rs1382394474 |
.Foundation for Research in Genetics and Endocrinology, FRIGE's Institute of Human Genetics .Neuberg Centre For Genomic Medicine, NCGM |
| NM_000404.4(GLB1):c.1325G>A (p.Arg442Gln) | Single nucleotide variant | Chr3:33018470 | Pathogenic/Likely pathogenic | Missense variant | rs564428355 |
.Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India .Neuberg Centre For Genomic Medicine, NCGM |
| NM_000404.4(GLB1):c.276G>A (p.Trp92Ter) | Single nucleotide variant | Chr3:33068940 | Pathogenic | Nonsense|intron variant | rs748830051 |
.Foundation for Research in Genetics and Endocrinology, FRIGE's Institute of Human Genetics |
| NM_000404.4(GLB1):c.1769G>A (p.Arg590His) | Single nucleotide variant | Chr3:32997310 | Pathogenic/Likely pathogenic | Missense variant|intron variant | rs398123351 |
.Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India |
| NM_000404.4(GLB1):c.202C>T (p.Arg68Trp) | Single nucleotide variant | Chr3:33072587 | Pathogenic | Missense variant | rs72555370 |
.Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India |
| NM_000404.4(GLB1):c.1369C>T (p.Arg457Ter) | Single nucleotide variant | Chr3:33016819 | Pathogenic | Nonsense | rs72555359 |
.Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India .Neuberg Centre For Genomic Medicine, NCGM |
| NM_000404.4(GLB1):c.75+2dup | Duplication | Chr3:33097008 - 33097009 | Pathogenic | 5 prime UTR variant|splice donor variant | rs587776525 |
.Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India .Neuberg Centre For Genomic Medicine, NCGM |
Indian Institutes & Variant Submission Overview
Chromosome-wise Variant Distribution