GenTIGSA Gene Database on Rare Genetic Disorders

Variants in ClinVar from 539 of 916 Rare Genetic Disorders of GenTIGS

Hereditary pancreatitis

An  Autosomal dominant  mode(s) within the Gastrointestinal disorders  category

Conflicting classifications of pathogenicity 2
Pathogenic 1
Uncertain significance 3

Variant name Variant type GRCH38 location Germline classification Molecular consequence dbSNP_ID Submitter
NM_000492.4(CFTR):c.3468+6T>C Single nucleotide variant Chr7:117614719 Uncertain significance rs547442588 .Foundation for Research in Genetics and Endocrinology, FRIGE's Institute of Human Genetics
NM_000492.4(CFTR):c.640C>G (p.Leu214Val) Single nucleotide variant Chr7:117535308 Uncertain significance Missense variant rs188457893 .GenePathDx, GenePath diagnostics
NM_000492.4(CFTR):c.2T>C (p.Met1Thr) Single nucleotide variant Chr7:117480096 Pathogenic Missense variant|initiator_codon_variant rs397508476 .Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India
.Lifecell International Pvt. Ltd
.Suma Genomics
NM_002769.5(PRSS1):c.86A>T (p.Asn29Ile) Single nucleotide variant Chr7:142750600 Conflicting classifications of pathogenicity Missense variant rs111033566 .Neuberg Centre For Genomic Medicine, NCGM
NM_016103.4(SAR1B):c.344T>C (p.Leu115Pro) Single nucleotide variant Chr5:134609575 Uncertain significance Missense variant rs2150050070 .Neuberg Centre For Genomic Medicine, NCGM
NM_001379610.1(SPINK1):c.200G>A (p.Arg67His) Single nucleotide variant Chr5:147824701 Conflicting classifications of pathogenicity Missense variant rs35523678

Indian Institutes & Variant Submission Overview
Chromosome-wise Variant Distribution