GenTIGSA Gene Database on Rare Genetic Disorders

Variants in ClinVar from 539 of 916 Rare Genetic Disorders of GenTIGS

Familial adenomatous polyposis

An  Autosomal dominant, Autosomal recessive  mode(s) within the Cancer disorders  category

Conflicting classifications of pathogenicity 1
Pathogenic 3

Variant name Variant type GRCH38 location Germline classification Molecular consequence dbSNP_ID Submitter
NM_000038.6(APC):c.2547_2550del (p.Asp849fs) Deletion Chr5:112838138 - 112838141 Pathogenic Frameshift variant rs398123118 .Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India
NM_000038.6(APC):c.3927_3931del (p.Glu1309fs) Microsatellite Chr5:112839515 - 112839519 Pathogenic Frameshift variant rs121913224 .Biotechnology, Institute of Science, Nirma University
.Foundation for Research in Genetics and Endocrinology, FRIGE's Institute of Human Genetics
.GenePathDx, GenePath diagnostics
.Neuberg Centre For Genomic Medicine, NCGM
NM_001048174.2(MUTYH):c.1354G>T (p.Glu452Ter) Single nucleotide variant Chr1:45331220 Pathogenic Nonsense|non-coding transcript variant rs121908381 .Foundation for Research in Genetics and Endocrinology, FRIGE's Institute of Human Genetics
.Neuberg Centre For Genomic Medicine, NCGM
NM_000376.3(VDR):c.803T>C (p.Ile268Thr) Single nucleotide variant Chr12:47846761 Conflicting classifications of pathogenicity Missense variant rs1164008328 .Neuberg Centre For Genomic Medicine, NCGM

Indian Institutes & Variant Submission Overview
Chromosome-wise Variant Distribution