Developmental and epileptic encephalopathy 6B
An Autosomal dominant mode(s) within the Neurodevelopmental disorders category
Conflicting classifications of pathogenicity
3
Likely pathogenic
3
Pathogenic
6
Pathogenic/Likely pathogenic
3
| Variant name | Variant type | GRCH38 location | Germline classification | Molecular consequence | dbSNP_ID | Submitter |
|---|---|---|---|---|---|---|
| NM_001165963.4(SCN1A):c.3793C>A (p.Leu1265Met) | Single nucleotide variant | Chr2:166012195 | Likely pathogenic | Missense variant|non-coding transcript variant | rs781526618 |
.Lifecell International Pvt. Ltd |
| NM_001165963.4(SCN1A):c.3999G>A (p.Met1333Ile) | Single nucleotide variant | Chr2:166009722 | Likely pathogenic | Missense variant|non-coding transcript variant | rs1559140155 |
.Lifecell International Pvt. Ltd |
| NM_001165963.4(SCN1A):c.5299G>T (p.Val1767Phe) | Single nucleotide variant | Chr2:165991976 | Likely pathogenic | Missense variant|non-coding transcript variant | rs2468334088 |
.Lifecell International Pvt. Ltd |
| NM_001165963.4(SCN1A):c.5263G>T (p.Asp1755Tyr) | Single nucleotide variant | Chr2:165992012 | Pathogenic/Likely pathogenic | Missense variant|non-coding transcript variant | rs927722314 |
.Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India |
| NM_001165963.4(SCN1A):c.5501C>T (p.Ala1834Val) | Single nucleotide variant | Chr2:165991774 | Conflicting classifications of pathogenicity | Missense variant|non-coding transcript variant | rs780809852 |
.Lifecell International Pvt. Ltd |
| NM_001165963.4(SCN1A):c.5536_5539del (p.Lys1846fs) | Microsatellite | Chr2:165991736 - 165991739 | Pathogenic | Frameshift variant|non-coding transcript variant | rs794726726 |
.Lifecell International Pvt. Ltd |
| NM_001165963.4(SCN1A):c.4906C>T (p.Arg1636Ter) | Single nucleotide variant | Chr2:165992369 | Pathogenic | Nonsense|non-coding transcript variant | rs199727342 |
.Lifecell International Pvt. Ltd |
| NM_001165963.4(SCN1A):c.1171-1G>A | Single nucleotide variant | Chr2:166046977 | Pathogenic/Likely pathogenic | Splice acceptor variant | rs2468182873 |
.Lifecell International Pvt. Ltd |
| NM_001165963.4(SCN1A):c.2589+2dup | Duplication | Chr2:166039420 - 166039421 | Pathogenic/Likely pathogenic | Splice donor variant | rs2468112683 |
.Lifecell International Pvt. Ltd |
| NM_001165963.4(SCN1A):c.1982C>T (p.Thr661Ile) | Single nucleotide variant | Chr2:166043730 | Conflicting classifications of pathogenicity | Missense variant|5 prime UTR variant|non-coding transcript variant|intron variant | rs780340848 |
.Lifecell International Pvt. Ltd |
| NM_001165963.4(SCN1A):c.2994C>A (p.Asp998Glu) | Single nucleotide variant | Chr2:166036483 | Conflicting classifications of pathogenicity | Missense variant|non-coding transcript variant | rs796052991 |
.Lifecell International Pvt. Ltd .Neuberg Centre For Genomic Medicine, NCGM |
| NM_001165963.4(SCN1A):c.602+1G>A | Single nucleotide variant | Chr2:166054637 | Pathogenic | Splice donor variant | rs794726827 |
.Foundation for Research in Genetics and Endocrinology, FRIGE's Institute of Human Genetics .Neuberg Centre For Genomic Medicine, NCGM |
| NM_001165963.4(SCN1A):c.2589+3A>T | Single nucleotide variant | Chr2:166039420 | Pathogenic | Intron variant | rs794726775 |
.Lifecell International Pvt. Ltd |
| NM_001165963.4(SCN1A):c.677C>T (p.Thr226Met) | Single nucleotide variant | Chr2:166052869 | Pathogenic | Missense variant|5 prime UTR variant|non-coding transcript variant | rs121917984 |
.Foundation for Research in Genetics and Endocrinology, FRIGE's Institute of Human Genetics .Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India |
| NM_001165963.4(SCN1A):c.302G>A (p.Arg101Gln) | Single nucleotide variant | Chr2:166058651 | Pathogenic | Missense variant|5 prime UTR variant|non-coding transcript variant | rs121917918 |
.Lifecell International Pvt. Ltd |
Indian Institutes & Variant Submission Overview
Chromosome-wise Variant Distribution