GenTIGSA Gene Database on Rare Genetic Disorders

Variants in ClinVar from 539 of 916 Rare Genetic Disorders of GenTIGS

Bethlem myopathy

An  Autosomal dominant, Autosomal recessive  mode(s) within the Neuromuscular disorders  category

Conflicting classifications of pathogenicity 5
Pathogenic 3
Pathogenic/Likely pathogenic 3

Variant name Variant type GRCH38 location Germline classification Molecular consequence dbSNP_ID Submitter
NM_004370.6(COL12A1):c.6061C>T (p.Arg2021Ter) Single nucleotide variant Chr6:75130858 Pathogenic Nonsense rs1333110706 .Division of Medical Genetics, Department of Pediatrics, All India Institute of Medical Sciences, New Delhi
NM_001848.3(COL6A1):c.930+2T>A Single nucleotide variant Chr21:45989780 Pathogenic Splice donor variant .Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India
NM_001848.3(COL6A1):c.877G>A (p.Gly293Arg) Single nucleotide variant Chr21:45989626 Pathogenic/Likely pathogenic Missense variant rs398123643 .Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India
NM_001848.3(COL6A1):c.850G>A (p.Gly284Arg) Single nucleotide variant Chr21:45989129 Pathogenic/Likely pathogenic Missense variant rs121912938 .Foundation for Research in Genetics and Endocrinology, FRIGE's Institute of Human Genetics
NM_001849.4(COL6A2):c.1990C>T (p.Gln664Ter) Single nucleotide variant Chr21:46125805 Pathogenic Nonsense rs1382122104 .Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India
NM_001849.4(COL6A2):c.1615C>T (p.Arg539Ter) Single nucleotide variant Chr21:46122881 Pathogenic/Likely pathogenic Nonsense rs749593004 .Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India
NM_001849.4(COL6A2):c.2795C>T (p.Pro932Leu) Single nucleotide variant Chr21:46132287 Conflicting classifications of pathogenicity Missense variant rs117725825 .Foundation for Research in Genetics and Endocrinology, FRIGE's Institute of Human Genetics
NM_004369.4(COL6A3):c.3700G>A (p.Val1234Met) Single nucleotide variant Chr2:237372317 Conflicting classifications of pathogenicity Missense variant rs747082651 .Foundation for Research in Genetics and Endocrinology, FRIGE's Institute of Human Genetics
NM_004369.4(COL6A3):c.6898G>A (p.Gly2300Arg) Single nucleotide variant Chr2:237348645 Conflicting classifications of pathogenicity Missense variant rs763348222 .Department of Biochemistry, All India Institute of Medical Sciences, Kalyani
NM_004369.4(COL6A3):c.3844G>A (p.Val1282Met) Single nucleotide variant Chr2:237372173 Conflicting classifications of pathogenicity Missense variant rs535661345 .Foundation for Research in Genetics and Endocrinology, FRIGE's Institute of Human Genetics
NM_004369.4(COL6A3):c.175C>T (p.Arg59Ter) Single nucleotide variant Chr2:237395121 Conflicting classifications of pathogenicity Nonsense|intron variant rs398124119 .Lifecell International Pvt. Ltd

Indian Institutes & Variant Submission Overview
Chromosome-wise Variant Distribution