GenTIGSA Gene Database on Rare Genetic Disorders

Variants in ClinVar from 539 of 916 Rare Genetic Disorders of GenTIGS

Autosomal recessive polycystic kidney disease

An  Autosomal recessive  mode(s) within the Nephrological disorders  category

Conflicting classifications of pathogenicity 3
Pathogenic 2
Pathogenic/Likely pathogenic 4

Variant name Variant type GRCH38 location Germline classification Molecular consequence dbSNP_ID Submitter
NM_138694.4(PKHD1):c.4870C>T (p.Arg1624Trp) Single nucleotide variant Chr6:52024940 Pathogenic/Likely pathogenic Missense variant rs200391019 .Lifecell International Pvt. Ltd
.Neuberg Centre For Genomic Medicine, NCGM
.Suma Genomics
NM_001009944.3(PKD1):c.9404C>T (p.Thr3135Met) Single nucleotide variant Chr16:2100560 Conflicting classifications of pathogenicity Missense variant rs1555449635 .Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India
NM_138694.4(PKHD1):c.1260del (p.Thr421fs) Deletion Chr6:52058575 Pathogenic/Likely pathogenic Frameshift variant rs2533374401 .Foundation for Research in Genetics and Endocrinology, FRIGE's Institute of Human Genetics
.Genetics laboratory, Department of Obstetrics & Gynae, Institute of Kidney Diseases & Research Centre Dr. H.L. Trivedi Institute Of Transplantation Sciences
NM_138694.4(PKHD1):c.8208del (p.Trp2736fs) Deletion Chr6:51830955 Pathogenic/Likely pathogenic Frameshift variant rs2151512076 .Lifecell International Pvt. Ltd
NM_138694.4(PKHD1):c.3118C>T (p.Arg1040Ter) Single nucleotide variant Chr6:52035701 Pathogenic Nonsense rs755183117 .Lifecell International Pvt. Ltd
NM_138694.4(PKHD1):c.2638C>T (p.Arg880Cys) Single nucleotide variant Chr6:52045043 Conflicting classifications of pathogenicity Missense variant rs752646435 .Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India
NM_138694.4(PKHD1):c.9719G>A (p.Arg3240Gln) Single nucleotide variant Chr6:51747897 Pathogenic/Likely pathogenic Missense variant rs146649803 .Lifecell International Pvt. Ltd
NM_138694.4(PKHD1):c.2167C>T (p.Arg723Cys) Single nucleotide variant Chr6:52050269 Conflicting classifications of pathogenicity Missense variant rs794727366 .Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India
.Neuberg Centre For Genomic Medicine, NCGM
NM_138694.4(PKHD1):c.2341C>T (p.Arg781Ter) Single nucleotide variant Chr6:52048558 Pathogenic Nonsense rs398124478 .Lifecell International Pvt. Ltd

Indian Institutes & Variant Submission Overview
Chromosome-wise Variant Distribution