GenTIGSA Gene Database on Rare Genetic Disorders
  Beta Version

Variants from 536 rare genetic disorders, with a total of 897 reported, submitted from India

Autosomal recessive polycystic kidney disease

An  Autosomal recessive  mode(s) within the Nephrological disorders  category

Conflicting classifications of pathogenicity 3
Pathogenic 2
Pathogenic/Likely pathogenic 4

Variant name Variant type GRCH38 location Germline classification Molecular consequence dbSNP_ID Submitter
NM_138694.4(PKHD1):c.4870C>T (p.Arg1624Trp) Single nucleotide variant Chr6:52024940 Pathogenic/Likely pathogenic Missense variant rs200391019 .Lifecell International Pvt. Ltd
.Neuberg Centre For Genomic Medicine, NCGM
.Suma Genomics
NM_001009944.3(PKD1):c.9404C>T (p.Thr3135Met) Single nucleotide variant Chr16:2100560 Conflicting classifications of pathogenicity Missense variant rs1555449635 .Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India
NM_138694.4(PKHD1):c.1260del (p.Thr421fs) Deletion Chr6:52058575 Pathogenic/Likely pathogenic Frameshift variant rs2533374401 .Foundation for Research in Genetics and Endocrinology, FRIGE's Institute of Human Genetics
.Genetics laboratory, Department of Obstetrics & Gynae, Institute of Kidney Diseases & Research Centre Dr. H.L. Trivedi Institute Of Transplantation Sciences
NM_138694.4(PKHD1):c.8208del (p.Trp2736fs) Deletion Chr6:51830955 Pathogenic/Likely pathogenic Frameshift variant rs2151512076 .Lifecell International Pvt. Ltd
NM_138694.4(PKHD1):c.3118C>T (p.Arg1040Ter) Single nucleotide variant Chr6:52035701 Pathogenic Nonsense rs755183117 .Lifecell International Pvt. Ltd
NM_138694.4(PKHD1):c.2638C>T (p.Arg880Cys) Single nucleotide variant Chr6:52045043 Conflicting classifications of pathogenicity Missense variant rs752646435 .Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India
NM_138694.4(PKHD1):c.9719G>A (p.Arg3240Gln) Single nucleotide variant Chr6:51747897 Pathogenic/Likely pathogenic Missense variant rs146649803 .Lifecell International Pvt. Ltd
NM_138694.4(PKHD1):c.2167C>T (p.Arg723Cys) Single nucleotide variant Chr6:52050269 Conflicting classifications of pathogenicity Missense variant rs794727366 .Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India
.Neuberg Centre For Genomic Medicine, NCGM
NM_138694.4(PKHD1):c.2341C>T (p.Arg781Ter) Single nucleotide variant Chr6:52048558 Pathogenic Nonsense rs398124478 .Lifecell International Pvt. Ltd

Graph displaying all Indian institutes, the rare genetic disorders they studied, and the variants submitted to ClinVar