GenTIGSA Gene Database on Rare Genetic Disorders

Variants in ClinVar from 539 of 916 Rare Genetic Disorders of GenTIGS

Ataxia-telangiectasia syndrome

An  Autosomal recessive  mode(s) within the Neurodegenerative disorders  category

Likely pathogenic 1
Pathogenic 4
Pathogenic/Likely pathogenic 3
Uncertain significance 6

Variant name Variant type GRCH38 location Germline classification Molecular consequence dbSNP_ID Submitter
NM_000051.3(ATM):c.[1236-2A>T];[497-1G>A] CompoundHeterozygote Chr: Uncertain significance .Manipal Hospitals, Manipal Hospital
NM_000051.4(ATM):c.8579C>A (p.Ser2860Tyr) Single nucleotide variant Chr11:108345903 Uncertain significance Missense variant|intron variant .Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India
NM_000051.4(ATM):c.8563A>C (p.Ser2855Arg) Single nucleotide variant Chr11:108345887 Uncertain significance Missense variant|intron variant .Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India
NM_000051.4(ATM):c.6725C>A (p.Ser2242Ter) Single nucleotide variant Chr11:108325462 Pathogenic Nonsense|intron variant rs2136314573 .Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India
NM_000051.4(ATM):c.8152-260G>A Single nucleotide variant Chr11:108335585 Uncertain significance Intron variant rs2086750148
NM_000051.4(ATM):c.2086_2087dup (p.Leu697fs) Duplication Chr11:108253999 - 108254000 Likely pathogenic Frameshift variant rs2497317778 .Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India
NM_000051.4(ATM):c.7288del (p.His2430fs) Deletion Chr11:108329219 Pathogenic Frameshift variant|intron variant rs2136423257 .Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India
NM_000051.4(ATM):c.1838del (p.Val613fs) Deletion Chr11:108252852 Pathogenic Frameshift variant rs2135353661 .Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India
NM_000051.4(ATM):c.6305C>T (p.Ala2102Val) Single nucleotide variant Chr11:108317479 Uncertain significance Missense variant|intron variant rs1591790037
NM_000051.4(ATM):c.2341C>T (p.Gln781Ter) Single nucleotide variant Chr11:108257571 Pathogenic/Likely pathogenic Nonsense rs1555075781 .Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India
NM_000051.4(ATM):c.8915A>G (p.Gln2972Arg) Single nucleotide variant Chr11:108365146 Uncertain significance Missense variant|intron variant rs763773991 .Neuberg Centre For Genomic Medicine, NCGM
NM_000051.4(ATM):c.4852C>T (p.Arg1618Ter) Single nucleotide variant Chr11:108295002 Pathogenic Nonsense rs762083530 .Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India
.Neuberg Centre For Genomic Medicine, NCGM
NM_000051.4(ATM):c.478_482del (p.Ser160fs) Deletion Chr11:108235815 - 108235819 Pathogenic/Likely pathogenic Frameshift variant rs587780624 .Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India
NM_000051.4(ATM):c.2250G>A (p.Lys750=) Single nucleotide variant Chr11:108256340 Pathogenic/Likely pathogenic Synonymous variant rs1137887 .Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India

Indian Institutes & Variant Submission Overview
Chromosome-wise Variant Distribution