GenTIGSA Gene Database on Rare Genetic Disorders

Variants in ClinVar from 539 of 916 Rare Genetic Disorders of GenTIGS

Alkaptonuria

An  Autosomal recessive  mode(s) within the Metabolic disorders  category

Pathogenic 2
Pathogenic/Likely pathogenic 1
Uncertain significance 2

Variant name Variant type GRCH38 location Germline classification Molecular consequence dbSNP_ID Submitter
NM_000187.4(HGD):c.887C>A (p.Ser296Tyr) Single nucleotide variant Chr3:120638574 Uncertain significance Missense variant .Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India
NM_000187.4(HGD):c.518T>C (p.Leu173Pro) Single nucleotide variant Chr3:120647004 Uncertain significance Missense variant rs2472701792 .Institute of Medical Genetics and Genomics, Sir Ganga Ram Hospital
NM_000187.4(HGD):c.347T>C (p.Leu116Pro) Single nucleotide variant Chr3:120650861 Pathogenic/Likely pathogenic Missense variant rs569846003 .Institute of Medical Genetics and Genomics, Sir Ganga Ram Hospital
NM_000187.4(HGD):c.365C>T (p.Ala122Val) Single nucleotide variant Chr3:120650843 Pathogenic Missense variant rs544956641 .Lifecell International Pvt. Ltd
.Neuberg Centre For Genomic Medicine, NCGM
NM_000187.4(HGD):c.175del (p.Ser59fs) Deletion Chr3:120674902 Pathogenic Frameshift variant rs397515517 .Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India
.Neuberg Centre For Genomic Medicine, NCGM

Indian Institutes & Variant Submission Overview
Chromosome-wise Variant Distribution