GenTIGSA Gene Database on Rare Genetic Disorders

Monogenic disorders list  

List of monogenic disorders and their associated genes
Monogenic disorders arise from mutations in a single gene, but variations within that gene or in multiple genes can also lead to similar phenotypes, typically following Mendelian inheritance patterns associated with specific genetic changes.

View information by inheritance mode


S.No.  Genetic Disorders
Modes of inheritance
Category Gene symbol Indian
context
 Links
21 Ateleiotic dwarfism 
Autosomal recessive
Endocrine disorders GH1 growth hormone 1
BRCA2 BRCA2 DNA repair associated
XRCC4 X-ray repair cross complementing 4
CRIPT CXXC repeat containing interactor of PDZ3 domain
Reports
Updated as of Sep 08, 2025
PubMed
22 Atrophia bulborum hereditaria 
X-linked recessive
Eye disorders / Ear disorders NDP norrin cystine knot growth factor NDP
TSPAN12 tetraspanin 12
Reports
Updated as of Jan 04, 2024
PubMed
23 Autism spectrum disorder 
Neurodevelopmental disorders TSC2 TSC complex subunit 2
SLC35A3 solute carrier family 35 member A3
AUTS2 activator of transcription and developmental regulator AUTS2
MEF2C myocyte enhancer factor 2C
EHMT1 euchromatic histone lysine methyltransferase 1
TOP2B DNA topoisomerase II beta
SHANK2 SH3 and multiple ankyrin repeat domains 2
SNRPN small nuclear ribonucleoprotein polypeptide N
SCN2A sodium voltage-gated channel alpha subunit 2
POGZ pogo transposable element derived with ZNF domain
CNTNAP2 contactin associated protein 2
PTEN phosphatase and tensin homolog
HEPACAM hepatic and glial cell adhesion molecule
DEAF1 DEAF1 transcription factor
NF1 neurofibromin 1
SBF1 SET binding factor 1
IQSEC2 IQ motif and Sec7 domain ArfGEF 2
KMT2D lysine methyltransferase 2D
UBN2 ubinuclein 2
MAP1B microtubule associated protein 1B
ARHGEF9 Cdc42 guanine nucleotide exchange factor 9
PTCHD1 patched domain containing 1
SETD5 SET domain containing 5
PTPN11 protein tyrosine phosphatase non-receptor type 11
RERE arginine-glutamic acid dipeptide repeats
NR4A2 nuclear receptor subfamily 4 group A member 2
SATB2 SATB homeobox 2
WDFY3 WD repeat and FYVE domain containing 3
ARID1B AT-rich interaction domain 1B
KAT6A lysine acetyltransferase 6A
STXBP1 syntaxin binding protein 1
ASXL1 ASXL transcriptional regulator 1
ADNP activity dependent neuroprotector homeobox
ACTL6B actin like 6B
DNMT3A DNA methyltransferase 3 alpha
CNTN6 contactin 6
CIC capicua transcriptional repressor
CHD2 chromodomain helicase DNA binding protein 2
CSNK2B casein kinase 2 beta
KDM6A lysine demethylase 6A
DYNC1H1 dynein cytoplasmic 1 heavy chain 1
KCNMA1 potassium calcium-activated channel subfamily M alpha 1
EED embryonic ectoderm development
MECP2 methyl-CpG binding protein 2
DCC DCC netrin 1 receptor
TCF20 transcription factor 20
NR2F1 nuclear receptor subfamily 2 group F member 1
KDM5B lysine demethylase 5B
SETD2 SET domain containing 2, histone lysine methyltransferase
CEP104 centrosomal protein 104
SETD1A SET domain containing 1A, histone lysine methyltransferase
SPEN spen family transcriptional repressor
GRIN2B glutamate ionotropic receptor NMDA type subunit 2B
DIP2A disco interacting protein 2 homolog A
NBEA neurobeachin
KDM3B lysine demethylase 3B
ASXL2 ASXL transcriptional regulator 2
CHD3 chromodomain helicase DNA binding protein 3
EBF3 EBF transcription factor 3
GIGYF1 GRB10 interacting GYF protein 1
IRF2BPL interferon regulatory factor 2 binding protein like
ASXL3 ASXL transcriptional regulator 3
BCL11B BCL11 transcription factor B
HECTD4 HECT domain E3 ubiquitin protein ligase 4
AEBP1 AE binding protein 1
NRXN1 neurexin 1
ANK2 ankyrin 2
TNRC6B trinucleotide repeat containing adaptor 6B
RIMS1 regulating synaptic membrane exocytosis 1
CHD8 chromodomain helicase DNA binding protein 8
KMT2A lysine methyltransferase 2A
Reports
Updated as of Dec 29, 2023
PubMed
24 Autoimmune hemolytic anemia 
Autosomal recessive
Blood disorders SOCS1 suppressor of cytokine signaling 1
TLR8 toll like receptor 8
Reports
Updated as of Feb 20, 2024
PubMed
25 Autoimmune lymphoproliferative syndrome 
Autosomal dominant, Autosomal recessive
Immune disorders CASP8 caspase 8
FASLG Fas ligand
FAS Fas cell surface death receptor
PRKCD protein kinase C delta
CTLA4 cytotoxic T-lymphocyte associated protein 4
CASP10 caspase 10
Reports
Updated as of Jul 20, 2024
PubMed
26 Autoimmune pancreatitis 
Gastrointestinal disorders IL33 interleukin 33
IFNA1 interferon alpha 1
ENPP2 ectonucleotide pyrophosphatase/phosphodiesterase 2
SPINK1 serine peptidase inhibitor Kazal type 1
CA2 carbonic anhydrase 2
PRSS1 serine protease 1
CELA1 chymotrypsin like elastase 1
CELA3B chymotrypsin like elastase 3B
PRSS58 serine protease 58
Reports
Updated as of Jul 20, 2024
PubMed
27 Autosomal dominant hypocalcemia 
Autosomal dominant
Metabolic disorders CASR calcium sensing receptor
GNA11 G protein subunit alpha 11
Reports
Updated as of Jul 20, 2024
PubMed
28 Autosomal dominant polycystic kidney disease 
Autosomal dominant
Nephrological disorders PKD2 polycystin 2, transient receptor potential cation channel
PKD1 polycystin 1, transient receptor potential channel interacting
GANAB glucosidase II alpha subunit
DNAJB11 DnaJ heat shock protein family (Hsp40) member B11
Reports
Updated as of Jul 20, 2024
PubMed
29 Autosomal dominant Robinow syndrome 
Autosomal dominant
Bone disorders WNT5A Wnt family member 5A
DVL1 dishevelled segment polarity protein 1
DVL3 dishevelled segment polarity protein 3
FZD2 frizzled class receptor 2
CHN1 chimerin 1
Reports
Updated as of Nov 02, 2023
PubMed
30 Autosomal recessive multiple pterygium syndrome 
Autosomal recessive
Multisystemic disorders CHRNG cholinergic receptor nicotinic gamma subunit
CHRNA1 cholinergic receptor nicotinic alpha 1 subunit
Reports
Updated as of Feb 01, 2025
PubMed