Total 34 pathogenic variants reported for Vitamin K-dependent clotting factors, combined deficiency of, type 1
| Variant Name |
Variant Type |
Variant Genomic Location |
Clinical Significance |
Phenotype Condition |
Review Status |
ClinGen Allele |
dbSNP ID |
Variation/condition record |
|
NM_000821.7(GGCX):c.1181T>G (p.Leu394Arg)
|
SNV Germline |
Chr2:85553045 |
Pathogenic |
Vitamin K-dependent clotting factors, combined deficiency of, type 1 |
No Assertion Criteria Provided |
CA126262 |
rs_121909675 |
1 SubmittersRCV000017578 |
|
NM_000821.7(GGCX):c.1502G>C (p.Trp501Ser)
|
SNV Germline |
Chr2:85551919 |
Pathogenic |
Vitamin K-dependent clotting factors, combined deficiency of, type 1 |
No Assertion Criteria Provided |
CA126263 |
rs_28928872 |
1 SubmittersRCV000017579 |
|
NM_000821.7(GGCX):c.1454G>C (p.Arg485Pro)
|
SNV Germline |
Chr2:85551967 |
Pathogenic |
Vitamin K-dependent clotting factors, combined deficiency of, type 1 Condition: not provided |
Criteria Provided Single Submitter |
CA126264 |
rs_121909676 |
2 SubmittersRCV000017581RCV003556035 |
|
NM_000821.7(GGCX):c.215-1G>T
|
SNV Germline |
Chr2:85559076 |
Pathogenic |
Vitamin K-dependent clotting factors, combined deficiency of, type 1 |
No Assertion Criteria Provided |
CA212965 |
rs_786205096 |
1 SubmittersRCV000017582 |
|
NM_000821.7(GGCX):c.763G>A (p.Val255Met)
|
SNV Germline |
Chr2:85554269 |
Pathogenic/Likely pathogenic |
Body skin hyperlaxity due to vitamin K-dependent coagulation factor deficiency Vitamin K-dependent clotting factors, combined deficiency of, type 1 Body skin hyperlaxity due to vitamin K-dependent coagulation factor deficiency Condition: not provided GGCX - Related Disorders |
Criteria Provided Multiple Submitters No Conflicts |
CA214957 |
rs_121909683 |
5 SubmittersRCV000017590RCV001824572RCV001851893RCV005249990 |
|
NM_000821.7(GGCX):c.1906C>A (p.Pro636Thr)
|
SNV Germline |
Chr2:85550733 |
Conflicting classifications of pathogenicity |
Vitamin K-dependent clotting factors, combined deficiency of, type 1 Condition: not provided GGCX-related disorder Body skin hyperlaxity due to vitamin K-dependent coagulation factor deficiency |
Criteria Provided Conflicting Classifications |
CA1741686 |
rs_61733105 |
5 SubmittersRCV000398188RCV000879256RCV003932342RCV004820842 |
|
NM_000821.7(GGCX):c.24G>A (p.Ala8=)
|
SNV Germline |
Chr2:85561405 |
Conflicting classifications of pathogenicity |
Vitamin K-dependent clotting factors, combined deficiency of, type 1 Condition: not provided |
Criteria Provided Conflicting Classifications |
CA1742255 |
rs_371622780 |
3 SubmittersRCV000294993RCV002057719 |
|
NM_000821.7(GGCX):c.198C>T (p.Val66=)
|
SNV Germline |
Chr2:85560831 |
Conflicting classifications of pathogenicity |
Vitamin K-dependent clotting factors, combined deficiency of, type 1 Condition: not provided |
Criteria Provided Conflicting Classifications |
CA1742203 |
rs_147427088 |
2 SubmittersRCV000329103RCV003765964 |
|
NM_000821.7(GGCX):c.159C>A (p.Thr53=)
|
SNV Germline |
Chr2:85560870 |
Conflicting classifications of pathogenicity |
Vitamin K-dependent clotting factors, combined deficiency of, type 1 Condition: not provided |
Criteria Provided Conflicting Classifications |
CA1742207 |
rs_61733104 |
2 SubmittersRCV000293731RCV002057718 |
|
NM_000821.7(GGCX):c.*107T>G
|
SNV Germline |
Chr2:85549827 |
Conflicting classifications of pathogenicity |
Vitamin K-dependent clotting factors, combined deficiency of, type 1 Condition: not provided |
Criteria Provided Conflicting Classifications |
CA10616175 |
rs_78909830 |
2 SubmittersRCV000373520RCV001691962 |
|
NM_000821.7(GGCX):c.849G>C (p.Val283=)
|
SNV Germline |
Chr2:85554183 |
Conflicting classifications of pathogenicity |
Vitamin K-dependent clotting factors, combined deficiency of, type 1 Condition: not provided |
Criteria Provided Conflicting Classifications |
CA1742001 |
rs_149603998 |
2 SubmittersRCV000262362RCV002057716 |
|
NM_000821.7(GGCX):c.789C>T (p.Asp263=)
|
SNV Germline |
Chr2:85554243 |
Conflicting classifications of pathogenicity |
Vitamin K-dependent clotting factors, combined deficiency of, type 1 Condition: not provided |
Criteria Provided Conflicting Classifications |
CA1742014 |
rs_146085955 |
3 SubmittersRCV000322165RCV002057717 |
|
NM_000821.7(GGCX):c.507T>C (p.Phe169=)
|
SNV Germline |
Chr2:85558472 |
Conflicting classifications of pathogenicity |
Vitamin K-dependent clotting factors, combined deficiency of, type 1 Condition: not provided |
Criteria Provided Conflicting Classifications |
CA1742117 |
rs_536257863 |
2 SubmittersRCV000382491RCV002519991 |
|
NM_000821.7(GGCX):c.2133T>G (p.Pro711=)
|
SNV Germline |
Chr2:85550078 |
Conflicting classifications of pathogenicity |
Vitamin K-dependent clotting factors, combined deficiency of, type 1 Condition: not provided |
Criteria Provided Conflicting Classifications |
CA10616328 |
rs_886056379 |
2 SubmittersRCV000377112RCV002519988 |
|
NM_000821.7(GGCX):c.1107C>T (p.Leu369=)
|
SNV Germline |
Chr2:85553280 |
Conflicting classifications of pathogenicity |
Vitamin K-dependent clotting factors, combined deficiency of, type 1 Condition: not provided GGCX-related disorder |
Criteria Provided Conflicting Classifications |
CA1741924 |
rs_145056129 |
3 SubmittersRCV000297724RCV002523144RCV003972426 |
|
NM_000821.7(GGCX):c.529A>G (p.Asn177Asp)
|
SNV Germline |
Chr2:85558450 |
Conflicting classifications of pathogenicity |
Vitamin K-dependent clotting factors, combined deficiency of, type 1 Condition: not provided GGCX-related disorder |
Criteria Provided Conflicting Classifications |
CA1742108 |
rs_149039591 |
3 SubmittersRCV000323161RCV000907563RCV003910308 |
|
NM_000821.7(GGCX):c.*3770T>C
|
SNV Germline |
Chr2:85546164 |
Conflicting classifications of pathogenicity |
Vitamin K-dependent clotting factors, combined deficiency of, type 1 Condition: not provided |
Criteria Provided Conflicting Classifications |
CA51729044 |
rs_141040739 |
2 SubmittersRCV001143174RCV003425950 |
|
NM_000821.7(GGCX):c.1743G>A (p.Leu581=)
|
SNV Germline |
Chr2:85551070 |
Conflicting classifications of pathogenicity |
Vitamin K-dependent clotting factors, combined deficiency of, type 1 Condition: not provided |
Criteria Provided Conflicting Classifications |
CA1741738 |
rs_56165933 |
2 SubmittersRCV001136908RCV002070597 |
|
NM_000821.7(GGCX):c.1485C>T (p.Pro495=)
|
SNV Germline |
Chr2:85551936 |
Conflicting classifications of pathogenicity |
Vitamin K-dependent clotting factors, combined deficiency of, type 1 Condition: not provided |
Criteria Provided Conflicting Classifications |
CA427440113 |
rs_1691972995 |
2 SubmittersRCV001136909RCV005056925 |
|
NM_000821.7(GGCX):c.990G>C (p.Leu330=)
|
SNV Germline |
Chr2:85553397 |
Conflicting classifications of pathogenicity |
Vitamin K-dependent clotting factors, combined deficiency of, type 1 Condition: not provided |
Criteria Provided Conflicting Classifications |
CA1741952 |
rs_374754358 |
2 SubmittersRCV001141774RCV002557012 |
|
NM_000821.7(GGCX):c.903C>T (p.Tyr301=)
|
SNV Germline |
Chr2:85553484 |
Conflicting classifications of pathogenicity |
Vitamin K-dependent clotting factors, combined deficiency of, type 1 Condition: not provided |
Criteria Provided Conflicting Classifications |
CA1741975 |
rs_751710756 |
2 SubmittersRCV001141775RCV005056934 |
|
NM_000821.7(GGCX):c.745C>T (p.Leu249=)
|
SNV Germline |
Chr2:85554287 |
Conflicting classifications of pathogenicity |
Vitamin K-dependent clotting factors, combined deficiency of, type 1 Condition: not provided |
Criteria Provided Conflicting Classifications |
CA427087400 |
rs_1262224787 |
2 SubmittersRCV001143584RCV003708577 |
|
NM_000821.7(GGCX):c.654G>A (p.Lys218=)
|
SNV Germline |
Chr2:85555555 |
Conflicting classifications of pathogenicity |
Vitamin K-dependent clotting factors, combined deficiency of, type 1 Condition: not provided |
Criteria Provided Conflicting Classifications |
CA51737840 |
rs_774751096 |
2 SubmittersRCV001143585RCV003769687 |
|
NM_000821.7(GGCX):c.1439+15C>T
|
SNV Germline |
Chr2:85552401 |
Conflicting classifications of pathogenicity |
Vitamin K-dependent clotting factors, combined deficiency of, type 1 Condition: not provided |
Criteria Provided Conflicting Classifications |
CA1741821 |
rs_758719852 |
2 SubmittersRCV001136912RCV003769648 |
|
NM_000821.7(GGCX):c.1155+12C>A
|
SNV Germline |
Chr2:85553220 |
Conflicting classifications of pathogenicity |
Vitamin K-dependent clotting factors, combined deficiency of, type 1 Condition: not provided |
Criteria Provided Conflicting Classifications |
CA894040679 |
rs_1284965933 |
2 SubmittersRCV001139153RCV002070643 |
|
NM_000821.7(GGCX):c.540-8C>T
|
SNV Germline |
Chr2:85556268 |
Conflicting classifications of pathogenicity |
Vitamin K-dependent clotting factors, combined deficiency of, type 1 Condition: not provided |
Criteria Provided Conflicting Classifications |
CA1742080 |
rs_374625413 |
2 SubmittersRCV001137012RCV003546641 |
|
NM_000821.7(GGCX):c.1987C>T (p.Gln663Ter)
|
SNV Germline |
Chr2:85550652 |
Pathogenic |
Vitamin K-dependent clotting factors, combined deficiency of, type 1 Condition: not provided |
Criteria Provided Single Submitter |
CA347482902 |
rs_1691898752 |
2 SubmittersRCV001280813RCV003698858 |
|
NM_000821.7(GGCX):c.773G>A (p.Gly258Asp)
|
SNV Germline |
Chr2:85554259 |
Likely pathogenic |
Vitamin K-dependent clotting factors, combined deficiency of, type 1 |
No Assertion Criteria Provided |
CA347489260 |
rs_1692107154 |
1 SubmittersRCV001280812 |
|
NM_000821.7(GGCX):c.1426C>G (p.Arg476Gly)
|
SNV Germline |
Chr2:85552429 |
Likely pathogenic |
Vitamin K-dependent clotting factors, combined deficiency of, type 1 |
No Assertion Criteria Provided |
|
|
1 SubmittersRCV004689392 |
|
NM_000821.7(GGCX):c.1282C>T (p.Pro428Ser)
|
SNV Germline |
Chr2:85552944 |
Likely pathogenic |
Vitamin K-dependent clotting factors, combined deficiency of, type 1 |
Criteria Provided Single Submitter |
|
|
1 SubmittersRCV004819932 |
|
NM_000821.7(GGCX):c.610C>T (p.Arg204Cys)
|
SNV Germline |
Chr2:85556190 |
Likely pathogenic |
Vitamin K-dependent clotting factors, combined deficiency of, type 1 Body skin hyperlaxity due to vitamin K-dependent coagulation factor deficiency |
Criteria Provided Single Submitter |
|
|
1 SubmittersRCV005365674 |
|
NM_000821.7(GGCX):c.1837C>T (p.Gln613Ter)
|
SNV Germline |
Chr2:85550976 |
Pathogenic |
Vitamin K-dependent clotting factors, combined deficiency of, type 1 |
Criteria Provided Single Submitter |
|
|
1 SubmittersRCV005412239 |