Total 13 pathogenic variants reported for Scalp-ear-nipple syndrome 
Variant Name Variant Type Variant Genomic Location Clinical Significance Phenotype Condition Review Status ClinGen Allele dbSNP ID Variation/condition record
NM_001142730.3(KCTD1):c.1913C>A (p.Ala638Glu) SNV
Germline
Chr18:26501147 Pathogenic Scalp-ear-nipple syndrome No Assertion Criteria Provided
CA143987 rs_587776998

2 SubmittersRCV000049292

NM_001142730.3(KCTD1):c.1916C>G (p.Pro639Arg) SNV
Germline
Chr18:26501144 Pathogenic Scalp-ear-nipple syndrome No Assertion Criteria Provided
CA143989 rs_587776999

2 SubmittersRCV000049293

NM_001142730.3(KCTD1):c.1916C>T (p.Pro639Leu) SNV
Germline
Chr18:26501144 Pathogenic Scalp-ear-nipple syndrome No Assertion Criteria Provided
CA143991 rs_587776999

2 SubmittersRCV000049294

NM_001142730.3(KCTD1):c.1916C>A (p.Pro639His) SNV
Germline
Chr18:26501144 Pathogenic Scalp-ear-nipple syndrome No Assertion Criteria Provided
CA143993 rs_587776999

2 SubmittersRCV000049295

NM_001142730.3(KCTD1):c.1923C>A (p.His641Gln) SNV
Germline
Chr18:26501137 Pathogenic Scalp-ear-nipple syndrome No Assertion Criteria Provided
CA143995 rs_587777000

2 SubmittersRCV000049296

NM_001142730.3(KCTD1):c.1922A>C (p.His641Pro) SNV
Germline
Chr18:26501138 Pathogenic Scalp-ear-nipple syndrome No Assertion Criteria Provided
CA143997 rs_587777001

2 SubmittersRCV000049297

NM_001142730.3(KCTD1):c.2045A>C (p.His682Pro) SNV
Germline
Chr18:26476603 Pathogenic Scalp-ear-nipple syndrome No Assertion Criteria Provided
CA143999 rs_587777002

2 SubmittersRCV000049298

NM_001142730.3(KCTD1):c.2009G>A (p.Gly670Asp) SNV
Germline
Chr18:26476639 Likely pathogenic Scalp-ear-nipple syndrome Criteria Provided
Single Submitter
CA144001 rs_587777003

3 SubmittersRCV000049299

NM_001142730.3(KCTD1):c.2031C>A (p.Asp677Glu) SNV
Unknown
Chr18:26476617 Pathogenic Scalp-ear-nipple syndrome No Assertion Criteria Provided
CA10581455 rs_878853124

1 SubmittersRCV000224280

NM_001142730.3(KCTD1):c.1882C>T (p.Pro628Ser) SNV
Unknown
Chr18:26501178 Pathogenic Scalp-ear-nipple syndrome No Assertion Criteria Provided
CA10581456 rs_878853125

1 SubmittersRCV000224008

NM_001142730.3(KCTD1):c.220G>T (p.Asp74Tyr) SNV
Germline
Chr18:26548317 Conflicting classifications of pathogenicity not specified
Scalp-ear-nipple syndrome
Criteria Provided
Conflicting Classifications
CA297814861 rs_963330003

2 SubmittersRCV004195876RCV005021742

NM_001142730.3(KCTD1):c.2545C>T (p.Arg849Trp) SNV
Germline
Chr18:26455796 Conflicting classifications of pathogenicity Condition: not provided
Scalp-ear-nipple syndrome
not specified
Criteria Provided
Conflicting Classifications
CA8922204 rs_759221642

3 SubmittersRCV003830562RCV005015011RCV004634371

NM_001142730.3(KCTD1):c.2056G>C (p.Asp686His) SNV
Germline
Chr18:26476592 Likely pathogenic Scalp-ear-nipple syndrome Criteria Provided
Single Submitter
rs_2510943436

1 SubmittersRCV004594860