Total 101 pathogenic variants reported for Progressive familial intrahepatic cholestasis type 1
| Variant Name |
Variant Type |
Variant Genomic Location |
Clinical Significance |
Phenotype Condition |
Review Status |
ClinGen Allele |
dbSNP ID |
Variation/condition record |
|
NM_003742.4(ABCB11):c.1723C>T (p.Arg575Ter)
|
SNV Germline |
Chr2:168970131 |
Pathogenic |
Progressive familial intrahepatic cholestasis type 2 Condition: not provided Benign recurrent intrahepatic cholestasis type 2 ABCB11-related disorder Progressive familial intrahepatic cholestasis type 2 Benign recurrent intrahepatic cholestasis type 2 See cases Progressive familial intrahepatic cholestasis type 1 |
Criteria Provided Multiple Submitters No Conflicts |
CA253876 |
rs_72549401 |
8 SubmittersRCV000006967RCV001851713RCV003472992RCV004742222RCV005025019RCV004797757RCV006451891 |
|
NM_001374385.1(ATP8B1):c.923G>T (p.Gly308Val)
|
SNV Germline |
Chr18:57695188 |
Pathogenic |
Progressive familial intrahepatic cholestasis type 1 Condition: not provided ATP8B1-related disorder Progressive familial intrahepatic cholestasis |
Criteria Provided Multiple Submitters No Conflicts |
CA340664 |
rs_111033609 |
8 SubmittersRCV000007684RCV000730982RCV004547463RCV005055508 |
|
NM_001374385.1(ATP8B1):c.2674G>A (p.Gly892Arg)
|
SNV Germline |
Chr18:57661207 |
Conflicting classifications of pathogenicity |
Progressive familial intrahepatic cholestasis type 1 Benign recurrent intrahepatic cholestasis type 1 Condition: not provided ATP8B1-related disorder Benign recurrent intrahepatic cholestasis type 1 Cholestasis, intrahepatic, of pregnancy, 1 Progressive familial intrahepatic cholestasis type 1 Progressive familial intrahepatic cholestasis |
Criteria Provided Conflicting Classifications |
CA254129 |
rs_121909098 |
7 SubmittersRCV000007685RCV003473051RCV003555959RCV004737141RCV005025025RCV004700199 |
|
NM_001374385.1(ATP8B1):c.863T>C (p.Leu288Ser)
|
SNV Germline |
Chr18:57695248 |
Pathogenic |
Progressive familial intrahepatic cholestasis type 1 |
No Assertion Criteria Provided |
CA254131 |
rs_121909099 |
1 SubmittersRCV000007686 |
|
NM_001374385.1(ATP8B1):c.2097+2T>C
|
SNV Germline |
Chr18:57669316 |
Pathogenic/Likely pathogenic |
Progressive familial intrahepatic cholestasis type 1 Condition: not provided Benign recurrent intrahepatic cholestasis type 1 |
Criteria Provided Multiple Submitters No Conflicts |
CA254133 |
rs_387906381 |
5 SubmittersRCV000007687RCV000734308RCV003473052 |
|
NM_001374385.1(ATP8B1):c.1982T>C (p.Ile661Thr)
|
SNV Germline |
Chr18:57669433 |
Pathogenic/Likely pathogenic |
Benign recurrent intrahepatic cholestasis type 1 Progressive familial intrahepatic cholestasis type 1 Condition: not provided Progressive familial intrahepatic cholestasis ATP8B1-related disorder Benign recurrent intrahepatic cholestasis type 1 Cholestasis, intrahepatic, of pregnancy, 1 Progressive familial intrahepatic cholestasis type 1 |
Criteria Provided Multiple Submitters No Conflicts |
CA254134 |
rs_121909100 |
16 SubmittersRCV000007689RCV000007690RCV000723736RCV003155019RCV004547464RCV005025026 |
|
NM_001374385.1(ATP8B1):c.1660G>A (p.Asp554Asn)
|
SNV Germline |
Chr18:57674993 |
Pathogenic |
Progressive familial intrahepatic cholestasis type 1 Condition: not provided ATP8B1-related disorder |
Criteria Provided Multiple Submitters No Conflicts |
CA340666 |
rs_121909101 |
7 SubmittersRCV000007692RCV000734790RCV004547465 |
|
NM_001374385.1(ATP8B1):c.208G>A (p.Asp70Asn)
|
SNV Germline |
Chr18:57706561 |
Conflicting classifications of pathogenicity |
Cholestasis, intrahepatic, of pregnancy, 1 not specified Benign recurrent intrahepatic cholestasis type 1 Condition: not provided Progressive familial intrahepatic cholestasis type 2 Progressive familial intrahepatic cholestasis type 1 ATP8B1-related disorder |
Criteria Provided Conflicting Classifications |
CA118646 |
rs_34719006 |
13 SubmittersRCV000007694RCV000177233RCV000661994RCV000952767RCV000661995RCV000661996RCV004737142 |
|
NM_001374385.1(ATP8B1):c.1367C>T (p.Thr456Met)
|
SNV Germline |
Chr18:57688361 |
Pathogenic/Likely pathogenic |
Progressive familial intrahepatic cholestasis type 1 Condition: not provided |
Criteria Provided Multiple Submitters No Conflicts |
CA254136 |
rs_121909104 |
3 SubmittersRCV000007696RCV005089202 |
|
NM_001374385.1(ATP8B1):c.1804C>T (p.Arg602Ter)
|
SNV Germline |
Chr18:57674849 |
Pathogenic |
Progressive familial intrahepatic cholestasis type 1 Familial intrahepatic cholestasis type 1 Condition: not provided Benign recurrent intrahepatic cholestasis type 1 |
Criteria Provided Multiple Submitters No Conflicts |
CA254138 |
rs_121909105 |
6 SubmittersRCV000007697RCV001250187RCV003555960RCV003473053 |
|
NM_000443.4(ABCB4):c.1769G>A (p.Arg590Gln)
|
SNV Germline |
Chr7:87431528 |
Conflicting classifications of pathogenicity |
Cholestasis, intrahepatic, of pregnancy, 3 Low phospholipid associated cholelithiasis not specified Condition: not provided Progressive familial intrahepatic cholestasis type 3 Progressive familial intrahepatic cholestasis type 1 ABCB4-related disorder Low phospholipid associated cholelithiasis Cholestasis, intrahepatic, of pregnancy, 3 Progressive familial intrahepatic cholestasis type 3 |
Criteria Provided Conflicting Classifications |
CA123370 |
rs_45575636 |
15 SubmittersRCV000014696RCV000033067RCV000249752RCV000723739RCV000662150RCV000987909RCV004545729RCV005042052 |
|
NM_001374385.1(ATP8B1):c.1993G>T (p.Glu665Ter)
|
SNV Germline |
Chr18:57669422 |
Pathogenic |
Progressive familial intrahepatic cholestasis type 1 Condition: not provided Inborn genetic diseases Progressive familial intrahepatic cholestasis Benign recurrent intrahepatic cholestasis type 1 |
Criteria Provided Multiple Submitters No Conflicts |
CA345468 |
rs_515726137 |
7 SubmittersRCV000114321RCV000726821RCV000624843RCV002509220RCV003474707 |
|
NM_001374385.1(ATP8B1):c.150A>G (p.Glu50=)
|
SNV Germline |
Chr18:57731658 |
Conflicting classifications of pathogenicity |
not specified Progressive familial intrahepatic cholestasis type 1 Condition: not provided |
Criteria Provided Conflicting Classifications |
CA241589 |
rs_137973298 |
4 SubmittersRCV000175808RCV000384022RCV000724633 |
|
NM_000443.4(ABCB4):c.101C>T (p.Thr34Met)
|
SNV Germline |
Chr7:87472655 |
Conflicting classifications of pathogenicity |
Condition: not provided Cholestasis, intrahepatic, of pregnancy, 3 Progressive familial intrahepatic cholestasis type 3 Low phospholipid associated cholelithiasis Progressive familial intrahepatic cholestasis type 1 ABCB4-related disorder Cholestasis, intrahepatic, of pregnancy, 3 |
Criteria Provided Conflicting Classifications |
CA243171 |
rs_142794414 |
9 SubmittersRCV000177067RCV000764725RCV000987920RCV004537422RCV003992213 |
|
NM_001374385.1(ATP8B1):c.607A>G (p.Lys203Glu)
|
SNV Germline |
Chr18:57697815 |
Conflicting classifications of pathogenicity |
not specified Condition: not provided Progressive familial intrahepatic cholestasis type 1 Benign recurrent intrahepatic cholestasis type 1 Progressive familial intrahepatic cholestasis type 1 Cholestasis, intrahepatic, of pregnancy, 1 ATP8B1-related disorder |
Criteria Provided Conflicting Classifications |
CA247228 |
rs_56355310 |
11 SubmittersRCV000179906RCV000724145RCV001123726RCV002485177RCV004553016 |
|
NM_000443.4(ABCB4):c.1210C>G (p.Pro404Ala)
|
SNV Germline |
Chr7:87443683 |
Conflicting classifications of pathogenicity |
Progressive familial intrahepatic cholestasis type 1 not specified |
Criteria Provided Conflicting Classifications |
CA085475 |
rs_863225298 |
2 SubmittersRCV000987915RCV004782324 |
|
NM_000443.4(ABCB4):c.431G>A (p.Arg144Gln)
|
SNV Germline |
Chr7:87453049 |
Conflicting classifications of pathogenicity |
Condition: not provided Progressive familial intrahepatic cholestasis type 1 Progressive familial intrahepatic cholestasis |
Criteria Provided Conflicting Classifications |
CA085477 |
rs_863225299 |
3 SubmittersRCV000734366RCV000987918RCV006456881 |
|
NM_001206979.2(NR1H4):c.526C>T (p.Arg176Ter)
|
SNV Germline |
Chr12:100532538 |
Pathogenic |
Cholestasis, progressive familial intrahepatic, 5 Progressive familial intrahepatic cholestasis type 1 Condition: not provided NR1H4-related disorder |
Criteria Provided Multiple Submitters No Conflicts |
CA6739265 |
rs_113090017 |
4 SubmittersRCV000239570RCV000240831RCV002515513RCV004754356 |
|
NM_001374385.1(ATP8B1):c.1177A>G (p.Ile393Val)
|
SNV Germline |
Chr18:57691850 |
Conflicting classifications of pathogenicity |
not specified Progressive familial intrahepatic cholestasis type 1 Condition: not provided |
Criteria Provided Conflicting Classifications |
CA8974642 |
rs_34315917 |
9 SubmittersRCV000246161RCV000344311RCV000971960 |
|
NM_000443.4(ABCB4):c.2800G>A (p.Ala934Thr)
|
SNV Germline |
Chr7:87412017 |
Conflicting classifications of pathogenicity |
not specified Condition: not provided Progressive familial intrahepatic cholestasis type 1 Progressive familial intrahepatic cholestasis type 3 Cholestasis, intrahepatic, of pregnancy, 3 See cases Severe early-childhood-onset retinal dystrophy ABCB4-related disorder |
Criteria Provided Conflicting Classifications |
CA4326928 |
rs_61730509 |
15 SubmittersRCV000322710RCV000413855RCV000987905RCV001164953RCV001164952RCV002252078RCV003989517RCV004529459 |
|
NM_001374385.1(ATP8B1):c.913T>A (p.Phe305Ile)
|
SNV Germline |
Chr18:57695198 |
Conflicting classifications of pathogenicity |
not specified Condition: not provided ATP8B1-related disorder Progressive familial intrahepatic cholestasis type 1 |
Criteria Provided Conflicting Classifications |
CA8974703 |
rs_150860808 |
11 SubmittersRCV000263650RCV000766301RCV004549616RCV001122637 |
|
NM_000443.4(ABCB4):c.1529A>G (p.Asn510Ser)
|
SNV Germline |
Chr7:87440230 |
Conflicting classifications of pathogenicity |
Condition: not provided Cholestasis, intrahepatic, of pregnancy, 3 Progressive familial intrahepatic cholestasis Progressive familial intrahepatic cholestasis type 3 ABCB4-related disorder Progressive familial intrahepatic cholestasis type 3 Cholestasis, intrahepatic, of pregnancy, 3 Low phospholipid associated cholelithiasis Progressive familial intrahepatic cholestasis type 1 |
Criteria Provided Conflicting Classifications |
CA4327275 |
rs_375315619 |
15 SubmittersRCV000427203RCV001003941RCV002298568RCV003333058RCV004537625RCV005044554RCV000987913 |
|
NM_001374385.1(ATP8B1):c.3654G>A (p.Ala1218=)
|
SNV Germline |
Chr18:57648590 |
Conflicting classifications of pathogenicity |
Progressive familial intrahepatic cholestasis type 1 Condition: not provided ATP8B1-related disorder |
Criteria Provided Conflicting Classifications |
CA8973949 |
rs_778786114 |
3 SubmittersRCV000328034RCV003765895RCV004549724 |
|
NM_001374385.1(ATP8B1):c.2498G>A (p.Arg833Gln)
|
SNV Germline |
Chr18:57661383 |
Conflicting classifications of pathogenicity |
Progressive familial intrahepatic cholestasis type 1 Inborn genetic diseases Condition: not provided |
Criteria Provided Conflicting Classifications |
CA8974236 |
rs_568134011 |
3 SubmittersRCV000307433RCV003243083RCV003574750 |
|
NM_001374385.1(ATP8B1):c.1072G>A (p.Gly358Ser)
|
SNV Germline |
Chr18:57691955 |
Conflicting classifications of pathogenicity |
Progressive familial intrahepatic cholestasis type 1 not specified Condition: not provided ATP8B1-related disorder |
Criteria Provided Conflicting Classifications |
CA8974657 |
rs_193204986 |
5 SubmittersRCV000402782RCV000733110RCV003114488RCV004549727 |
|
NM_001374385.1(ATP8B1):c.-51C>T
|
SNV Germline |
Chr18:57803023 |
Conflicting classifications of pathogenicity |
Progressive familial intrahepatic cholestasis type 1 not specified |
Criteria Provided Conflicting Classifications |
CA10641895 |
rs_150844949 |
2 SubmittersRCV000380376RCV000413994 |
|
NM_001374385.1(ATP8B1):c.2988C>T (p.Pro996=)
|
SNV Germline |
Chr18:57654019 |
Conflicting classifications of pathogenicity |
Progressive familial intrahepatic cholestasis type 1 not specified Condition: not provided |
Criteria Provided Conflicting Classifications |
CA10651147 |
rs_776385207 |
3 SubmittersRCV000300660RCV000440127RCV003556340 |
|
NM_001374385.1(ATP8B1):c.1711G>A (p.Ala571Thr)
|
SNV Germline |
Chr18:57674942 |
Conflicting classifications of pathogenicity |
Progressive familial intrahepatic cholestasis type 1 Condition: not provided ATP8B1-related disorder |
Criteria Provided Conflicting Classifications |
CA8974493 |
rs_35140429 |
4 SubmittersRCV000283339RCV000730370RCV004549726 |
|
NM_001374385.1(ATP8B1):c.3696G>A (p.Ser1232=)
|
SNV Germline |
Chr18:57648548 |
Conflicting classifications of pathogenicity |
Progressive familial intrahepatic cholestasis type 1 not specified Condition: not provided ATP8B1-related disorder |
Criteria Provided Conflicting Classifications |
CA8973931 |
rs_754912569 |
4 SubmittersRCV000270593RCV000442154RCV003727683RCV004549723 |
|
NM_001374385.1(ATP8B1):c.1429+14G>A
|
SNV Germline |
Chr18:57688285 |
Conflicting classifications of pathogenicity |
Progressive familial intrahepatic cholestasis type 1 Condition: not provided |
Criteria Provided Conflicting Classifications |
CA10651960 |
rs_886054012 |
2 SubmittersRCV000287094RCV003765897 |
|
NM_001374385.1(ATP8B1):c.782-5A>T
|
SNV Germline |
Chr18:57695334 |
Conflicting classifications of pathogenicity |
Progressive familial intrahepatic cholestasis type 1 Condition: not provided |
Criteria Provided Conflicting Classifications |
CA10651961 |
rs_886054013 |
2 SubmittersRCV000404765RCV003574751 |
|
NM_001374385.1(ATP8B1):c.394-7C>T
|
SNV Germline |
Chr18:57701320 |
Conflicting classifications of pathogenicity |
Progressive familial intrahepatic cholestasis type 1 Condition: not provided |
Criteria Provided Conflicting Classifications |
CA8974856 |
rs_370252509 |
2 SubmittersRCV000333177RCV003736721 |
|
NM_001374385.1(ATP8B1):c.1014C>T (p.Asn338=)
|
SNV Germline |
Chr18:57694597 |
Conflicting classifications of pathogenicity |
not specified Condition: not provided Progressive familial intrahepatic cholestasis type 1 ATP8B1-related disorder |
Criteria Provided Conflicting Classifications |
CA8974681 |
rs_145750280 |
6 SubmittersRCV000441391RCV000726888RCV001122636RCV004551466 |
|
NM_001374385.1(ATP8B1):c.1286A>C (p.Glu429Ala)
|
SNV Germline |
Chr18:57688442 |
Conflicting classifications of pathogenicity |
not specified Condition: not provided Progressive familial intrahepatic cholestasis type 1 ATP8B1-related disorder |
Criteria Provided Conflicting Classifications |
CA8974608 |
rs_34018205 |
8 SubmittersRCV000442917RCV000767080RCV001126304RCV004551446 |
|
NM_003742.4(ABCB11):c.1622T>C (p.Ile541Thr)
|
SNV Germline |
Chr2:168971863 |
Conflicting classifications of pathogenicity |
Condition: not provided Benign recurrent intrahepatic cholestasis type 2 ABCB11-related disorder Progressive familial intrahepatic cholestasis type 1 |
Criteria Provided Conflicting Classifications |
CA1951531 |
rs_753994013 |
4 SubmittersRCV000597368RCV003459468RCV004742520RCV005898672 |
|
NM_001374385.1(ATP8B1):c.212G>A (p.Arg71His)
|
SNV Germline |
Chr18:57706557 |
Conflicting classifications of pathogenicity |
Condition: not provided Progressive familial intrahepatic cholestasis type 1 not specified Cholestasis, intrahepatic, of pregnancy, 1 |
Criteria Provided Conflicting Classifications |
CA8974918 |
rs_148715351 |
5 SubmittersRCV000593626RCV001126391RCV002282258RCV003989569 |
|
NM_001374385.1(ATP8B1):c.1438C>T (p.Arg480Trp)
|
SNV Germline |
Chr18:57685107 |
Conflicting classifications of pathogenicity |
Condition: not provided Progressive familial intrahepatic cholestasis type 1 |
Criteria Provided Conflicting Classifications |
CA8974570 |
rs_142231389 |
3 SubmittersRCV000591168RCV001126303 |
|
NM_001374385.1(ATP8B1):c.1799G>A (p.Arg600Gln)
|
SNV Germline |
Chr18:57674854 |
Pathogenic/Likely pathogenic |
Condition: not provided Benign recurrent intrahepatic cholestasis type 1 Progressive familial intrahepatic cholestasis type 1 ATP8B1-related disorder |
Criteria Provided Multiple Submitters No Conflicts |
CA402560651 |
rs_1202682161 |
6 SubmittersRCV000593026RCV003471966RCV003485613RCV004553342 |
|
NM_000443.4(ABCB4):c.2217T>G (p.Phe739Leu)
|
SNV Germline |
Chr7:87422220 |
Conflicting classifications of pathogenicity |
Condition: not provided Progressive familial intrahepatic cholestasis type 1 not specified |
Criteria Provided Conflicting Classifications |
CA4327083 |
rs_143456575 |
3 SubmittersRCV000728122RCV000987907RCV001731911 |
|
NM_001374385.1(ATP8B1):c.1754A>G (p.Glu585Gly)
|
SNV Germline |
Chr18:57674899 |
Conflicting classifications of pathogenicity |
Condition: not provided Progressive familial intrahepatic cholestasis type 1 Inborn genetic diseases |
Criteria Provided Conflicting Classifications |
CA8974485 |
rs_35238397 |
4 SubmittersRCV000728140RCV001125341RCV003165956 |
|
NM_001374385.1(ATP8B1):c.2722G>A (p.Val908Ile)
|
SNV Germline |
Chr18:57655403 |
Conflicting classifications of pathogenicity |
Condition: not provided Progressive familial intrahepatic cholestasis type 1 Inborn genetic diseases Progressive familial intrahepatic cholestasis type 1 Benign recurrent intrahepatic cholestasis type 1 |
Criteria Provided Conflicting Classifications |
CA8974172 |
rs_200648620 |
5 SubmittersRCV000729794RCV001122544RCV002535133RCV004720279 |
|
NM_001374385.1(ATP8B1):c.2854C>T (p.Arg952Ter)
|
SNV Germline |
Chr18:57655271 |
Pathogenic |
Condition: not provided Progressive familial intrahepatic cholestasis type 1 |
Criteria Provided Multiple Submitters No Conflicts |
CA8974145 |
rs_765889649 |
7 SubmittersRCV000730680RCV003485636 |
|
NM_000443.4(ABCB4):c.475C>T (p.Arg159Ter)
|
SNV Germline |
Chr7:87453005 |
Pathogenic |
Condition: not provided Progressive familial intrahepatic cholestasis type 1 Cholestasis, intrahepatic, of pregnancy, 3 Low phospholipid associated cholelithiasis ABCB4-related disorder Low phospholipid associated cholelithiasis Cholestasis, intrahepatic, of pregnancy, 3 Progressive familial intrahepatic cholestasis type 3 Cholestasis, intrahepatic, of pregnancy, 3 Progressive familial intrahepatic cholestasis type 3 |
Criteria Provided Multiple Submitters No Conflicts |
CA4327533 |
rs_377160065 |
8 SubmittersRCV000732592RCV000987917RCV001003563RCV003447558RCV004535856RCV005046999RCV005622018 |
|
NM_000443.4(ABCB4):c.2784-12T>C
|
SNV Germline |
Chr7:87412045 |
Conflicting classifications of pathogenicity |
Progressive familial intrahepatic cholestasis type 1 Condition: not provided Progressive familial intrahepatic cholestasis ABCB4-Related Intrahepatic Cholestasis Low phospholipid associated cholelithiasis Progressive familial intrahepatic cholestasis type 3 Cholestasis, intrahepatic, of pregnancy, 3 Progressive familial intrahepatic cholestasis type 3 |
Criteria Provided Conflicting Classifications |
CA4326929 |
rs_201498350 |
8 SubmittersRCV000987906RCV002286794RCV002282417RCV003985096RCV005047161RCV005253663 |
|
NM_000443.4(ABCB4):c.1745G>A (p.Arg582Gln)
|
SNV Germline |
Chr7:87431552 |
Conflicting classifications of pathogenicity |
Progressive familial intrahepatic cholestasis type 1 Progressive familial intrahepatic cholestasis type 3 not specified Condition: not provided Progressive familial intrahepatic cholestasis type 3 Low phospholipid associated cholelithiasis Cholestasis, intrahepatic, of pregnancy, 3 |
Criteria Provided Conflicting Classifications |
CA4327213 |
rs_760153272 |
5 SubmittersRCV000987910RCV003158272RCV004689944RCV005092973RCV005047162 |
|
NM_000443.4(ABCB4):c.1714C>T (p.Gln572Ter)
|
SNV Germline |
Chr7:87439684 |
Pathogenic |
Progressive familial intrahepatic cholestasis type 1 Progressive familial intrahepatic cholestasis type 3 Condition: not provided |
Criteria Provided Multiple Submitters No Conflicts |
CA368038050 |
rs_1458423947 |
3 SubmittersRCV000987911RCV003485670RCV003769298 |
|
NM_000443.4(ABCB4):c.1322T>G (p.Leu441Arg)
|
SNV Unknown |
Chr7:87443353 |
Likely pathogenic |
Progressive familial intrahepatic cholestasis type 1 |
Criteria Provided Single Submitter |
CA368043656 |
rs_1584747270 |
1 SubmittersRCV000987914 |
|
NM_000443.4(ABCB4):c.1119+5G>A
|
SNV Unknown |
Chr7:87444857 |
Likely pathogenic |
Progressive familial intrahepatic cholestasis type 1 |
Criteria Provided Single Submitter |
CA915945329 |
rs_1584750653 |
1 SubmittersRCV000987916 |
|
NM_001374385.1(ATP8B1):c.3394T>G (p.Phe1132Val)
|
SNV Unknown |
Chr18:57652040 |
Likely pathogenic |
Progressive familial intrahepatic cholestasis type 1 |
Criteria Provided Single Submitter |
CA402541772 |
rs_1599066459 |
1 SubmittersRCV000990110 |
|
NM_001374385.1(ATP8B1):c.3015+1G>T
|
SNV Unknown |
Chr18:57653991 |
Likely pathogenic |
Progressive familial intrahepatic cholestasis type 1 |
Criteria Provided Single Submitter |
CA402545088 |
rs_1599069873 |
1 SubmittersRCV000990111 |
|
NM_001374385.1(ATP8B1):c.2251G>T (p.Glu751Ter)
|
SNV Germline |
Chr18:57667126 |
Likely pathogenic |
Progressive familial intrahepatic cholestasis type 1 Cholestasis, intrahepatic, of pregnancy, 1 Progressive familial intrahepatic cholestasis type 1 |
Criteria Provided Single Submitter |
CA402554701 |
rs_1057524081 |
1 SubmittersRCV000991407RCV001254601 |
|
NM_001374385.1(ATP8B1):c.2600G>A (p.Arg867His)
|
SNV Germline |
Chr18:57661281 |
Conflicting classifications of pathogenicity |
Condition: not provided Progressive familial intrahepatic cholestasis type 1 not specified |
Criteria Provided Conflicting Classifications |
CA8974218 |
rs_745546266 |
3 SubmittersRCV001091653RCV003339472RCV004782645 |
|
NM_001374385.1(ATP8B1):c.3669C>T (p.Ser1223=)
|
SNV Germline |
Chr18:57648575 |
Conflicting classifications of pathogenicity |
Progressive familial intrahepatic cholestasis type 1 Condition: not provided |
Criteria Provided Conflicting Classifications |
CA8973944 |
rs_375842507 |
2 SubmittersRCV001125233RCV003558690 |
|
NM_001374385.1(ATP8B1):c.3318C>T (p.Ser1106=)
|
SNV Germline |
Chr18:57652116 |
Conflicting classifications of pathogenicity |
Progressive familial intrahepatic cholestasis type 1 Condition: not provided ATP8B1-related disorder |
Criteria Provided Conflicting Classifications |
CA8974030 |
rs_140005450 |
3 SubmittersRCV001126210RCV003769211RCV004548008 |
|
NM_001374385.1(ATP8B1):c.2763G>A (p.Ser921=)
|
SNV Germline |
Chr18:57655362 |
Conflicting classifications of pathogenicity |
Progressive familial intrahepatic cholestasis type 1 Condition: not provided |
Criteria Provided Conflicting Classifications |
CA8974168 |
rs_758180192 |
2 SubmittersRCV001122543RCV003769188 |
|
NM_001374385.1(ATP8B1):c.1206C>T (p.Ile402=)
|
SNV Germline |
Chr18:57691821 |
Conflicting classifications of pathogenicity |
Progressive familial intrahepatic cholestasis type 1 Condition: not provided |
Criteria Provided Conflicting Classifications |
CA504009400 |
rs_1179570288 |
2 SubmittersRCV001128355RCV003769229 |
|
NM_001374385.1(ATP8B1):c.1101C>A (p.Gly367=)
|
SNV Germline |
Chr18:57691926 |
Conflicting classifications of pathogenicity |
Progressive familial intrahepatic cholestasis type 1 Condition: not provided |
Criteria Provided Conflicting Classifications |
CA8974653 |
rs_35969033 |
2 SubmittersRCV001128358RCV003769230 |
|
NM_001374385.1(ATP8B1):c.207C>T (p.Asn69=)
|
SNV Germline |
Chr18:57706562 |
Conflicting classifications of pathogenicity |
Progressive familial intrahepatic cholestasis type 1 Condition: not provided |
Criteria Provided Conflicting Classifications |
CA8974920 |
rs_201150730 |
2 SubmittersRCV001126392RCV003736992 |
|
NM_001374385.1(ATP8B1):c.3401-13A>G
|
SNV Germline |
Chr18:57650510 |
Conflicting classifications of pathogenicity |
Progressive familial intrahepatic cholestasis type 1 Condition: not provided |
Criteria Provided Conflicting Classifications |
CA8974016 |
rs_747437391 |
2 SubmittersRCV001126209RCV003769210 |
|
NM_001374385.1(ATP8B1):c.1819+10C>T
|
SNV Germline |
Chr18:57674824 |
Conflicting classifications of pathogenicity |
Progressive familial intrahepatic cholestasis type 1 Condition: not provided ATP8B1-related disorder |
Criteria Provided Conflicting Classifications |
CA8974468 |
rs_767885426 |
3 SubmittersRCV001125339RCV003565461RCV004548002 |
|
NM_003742.4(ABCB11):c.1460G>C (p.Arg487Pro)
|
SNV Germline |
Chr2:168972025 |
Pathogenic |
Condition: not provided Progressive familial intrahepatic cholestasis type 2 Progressive familial intrahepatic cholestasis type 1 |
Criteria Provided Multiple Submitters No Conflicts |
CA349116096 |
rs_188824058 |
3 SubmittersRCV001383194RCV001831384RCV006453668 |
|
NM_001374385.1(ATP8B1):c.1029G>A (p.Thr343=)
|
SNV Germline |
Chr18:57694582 |
Pathogenic/Likely pathogenic |
Progressive familial intrahepatic cholestasis type 1 Condition: not provided |
Criteria Provided Multiple Submitters No Conflicts |
CA300861361 |
rs_765716200 |
3 SubmittersRCV001544517RCV003771560 |
|
NM_001374385.1(ATP8B1):c.3040C>T (p.Arg1014Ter)
|
SNV Germline |
Chr18:57652705 |
Pathogenic |
not specified Condition: not provided Benign recurrent intrahepatic cholestasis type 1 Progressive familial intrahepatic cholestasis type 1 |
Criteria Provided Multiple Submitters No Conflicts |
CA8974086 |
rs_781213892 |
4 SubmittersRCV001733627RCV002508811RCV003326001RCV004584921 |
|
NM_003742.4(ABCB11):c.1621A>C (p.Ile541Leu)
|
SNV Germline |
Chr2:168971864 |
Pathogenic/Likely pathogenic |
Condition: not provided Benign recurrent intrahepatic cholestasis type 2 Progressive familial intrahepatic cholestasis type 2 Progressive familial intrahepatic cholestasis type 1 |
Criteria Provided Multiple Submitters No Conflicts |
CA59881211 |
rs_979738325 |
4 SubmittersRCV001992798RCV003464278RCV005253950RCV005924327 |
|
NM_001374385.1(ATP8B1):c.2821C>T (p.Arg941Ter)
|
SNV Germline |
Chr18:57655304 |
Pathogenic |
Progressive familial intrahepatic cholestasis type 1 Condition: not provided Benign recurrent intrahepatic cholestasis type 1 ATP8B1-related disorder |
Criteria Provided Multiple Submitters No Conflicts |
CA8974153 |
rs_374340059 |
4 SubmittersRCV002272580RCV003096128RCV003475320RCV004548254 |
|
NM_001374385.1(ATP8B1):c.1573C>T (p.Arg525Ter)
|
SNV Germline |
Chr18:57684093 |
Pathogenic |
Progressive familial intrahepatic cholestasis type 1 Condition: not provided Benign recurrent intrahepatic cholestasis type 1 Progressive familial intrahepatic cholestasis type 1 Benign recurrent intrahepatic cholestasis type 1 Cholestasis, intrahepatic, of pregnancy, 1 |
Criteria Provided Multiple Submitters No Conflicts |
CA8974528 |
rs_770257115 |
4 SubmittersRCV002272668RCV003560909RCV004572111RCV005025750 |
|
NM_001374385.1(ATP8B1):c.1798C>T (p.Arg600Trp)
|
SNV Germline |
Chr18:57674855 |
Conflicting classifications of pathogenicity |
Condition: not provided Progressive familial intrahepatic cholestasis type 1 Benign recurrent intrahepatic cholestasis type 1 Progressive familial intrahepatic cholestasis Benign recurrent intrahepatic cholestasis type 1 Progressive familial intrahepatic cholestasis type 1 Cholestasis, intrahepatic, of pregnancy, 1 |
Criteria Provided Conflicting Classifications |
CA402560653 |
rs_780186596 |
6 SubmittersRCV003143672RCV003228142RCV003475534RCV004587471RCV005029920 |
|
NM_001374385.1(ATP8B1):c.2609C>G (p.Pro870Arg)
|
SNV Germline |
Chr18:57661272 |
Likely pathogenic |
Progressive familial intrahepatic cholestasis type 1 |
Criteria Provided Single Submitter |
CA402550815 |
rs_2511652728 |
1 SubmittersRCV003388813 |
|
NM_001374385.1(ATP8B1):c.2558T>C (p.Phe853Ser)
|
SNV Germline |
Chr18:57661323 |
Pathogenic/Likely pathogenic |
Benign recurrent intrahepatic cholestasis type 1 Benign recurrent intrahepatic cholestasis type 1 Progressive familial intrahepatic cholestasis type 1 Cholestasis, intrahepatic, of pregnancy, 1 Progressive familial intrahepatic cholestasis |
Criteria Provided Multiple Submitters No Conflicts |
CA8974225 |
rs_773092889 |
3 SubmittersRCV003474245RCV005030049RCV004587500 |
|
NM_001374385.1(ATP8B1):c.2989G>A (p.Val997Met)
|
SNV Germline |
Chr18:57654018 |
Likely pathogenic |
Benign recurrent intrahepatic cholestasis type 1 Benign recurrent intrahepatic cholestasis type 1 Progressive familial intrahepatic cholestasis type 1 Cholestasis, intrahepatic, of pregnancy, 1 Condition: not provided |
Criteria Provided Multiple Submitters No Conflicts |
CA402545217 |
rs_1350129130 |
3 SubmittersRCV003474246RCV005030050RCV003779141 |
|
NM_003742.4(ABCB11):c.779G>A (p.Gly260Asp)
|
SNV Germline |
Chr2:168993715 |
Pathogenic/Likely pathogenic |
Benign recurrent intrahepatic cholestasis type 2 Progressive familial intrahepatic cholestasis type 1 |
Criteria Provided Multiple Submitters No Conflicts |
CA349127660 |
rs_2545450042 |
2 SubmittersRCV003465009RCV006269844 |
|
NM_001374385.1(ATP8B1):c.555-1G>C
|
SNV Germline |
Chr18:57697868 |
Pathogenic |
Progressive familial intrahepatic cholestasis type 1 |
Criteria Provided Single Submitter |
CA402545309 |
rs_2511779603 |
1 SubmittersRCV003485956 |
|
NM_001374385.1(ATP8B1):c.1336G>A (p.Gly446Arg)
|
SNV Germline |
Chr18:57688392 |
Pathogenic/Likely pathogenic |
Condition: not provided Progressive familial intrahepatic cholestasis Progressive familial intrahepatic cholestasis type 1 Cholestasis, intrahepatic, of pregnancy, 1 Benign recurrent intrahepatic cholestasis type 1 |
Criteria Provided Multiple Submitters No Conflicts |
CA402537661 |
rs_1443328607 |
3 SubmittersRCV003560062RCV004690435RCV005030116 |
|
NM_001374385.1(ATP8B1):c.886C>T (p.Arg296Cys)
|
SNV Germline |
Chr18:57695225 |
Pathogenic/Likely pathogenic |
Condition: not provided Benign recurrent intrahepatic cholestasis type 1 Progressive familial intrahepatic cholestasis Progressive familial intrahepatic cholestasis type 1 Cholestasis, intrahepatic, of pregnancy, 1 Benign recurrent intrahepatic cholestasis type 1 |
Criteria Provided Multiple Submitters No Conflicts |
CA402542036 |
rs_2511769729 |
4 SubmittersRCV003560063RCV004574111RCV004690436RCV005030117 |
|
NM_001374385.1(ATP8B1):c.1882C>T (p.Arg628Trp)
|
SNV Germline |
Chr18:57671518 |
Conflicting classifications of pathogenicity |
Benign recurrent intrahepatic cholestasis type 1 not specified Cholestasis, intrahepatic, of pregnancy, 1 Progressive familial intrahepatic cholestasis type 1 Benign recurrent intrahepatic cholestasis type 1 Condition: not provided |
Criteria Provided Conflicting Classifications |
|
rs_752045131 |
4 SubmittersRCV004573956RCV004587648RCV005023575RCV006276498 |
|
NM_001374385.1(ATP8B1):c.3282T>A (p.Tyr1094Ter)
|
SNV Germline |
Chr18:57652152 |
Likely pathogenic |
Benign recurrent intrahepatic cholestasis type 1 Cholestasis, intrahepatic, of pregnancy, 1 Progressive familial intrahepatic cholestasis type 1 |
Criteria Provided Single Submitter |
|
|
1 SubmittersRCV005026280 |
|
NM_001374385.1(ATP8B1):c.941-2A>G
|
SNV Germline |
Chr18:57694672 |
Likely pathogenic |
Benign recurrent intrahepatic cholestasis type 1 Cholestasis, intrahepatic, of pregnancy, 1 Progressive familial intrahepatic cholestasis type 1 |
Criteria Provided Single Submitter |
|
|
1 SubmittersRCV005026285 |
|
NM_003742.4(ABCB11):c.386G>A (p.Cys129Tyr)
|
SNV Germline |
Chr2:169013275 |
Pathogenic/Likely pathogenic |
Progressive familial intrahepatic cholestasis type 2 Progressive familial intrahepatic cholestasis type 1 |
Criteria Provided Multiple Submitters No Conflicts |
|
|
2 SubmittersRCV005255355RCV006456024 |
|
NM_001374385.1(ATP8B1):c.2698A>G (p.Met900Val)
|
SNV Germline |
Chr18:57661183 |
Likely pathogenic |
Progressive familial intrahepatic cholestasis type 1 |
No Assertion Criteria Provided |
|
|
1 SubmittersRCV005624232 |
|
NM_205834.4(LSR):c.353G>C (p.Cys118Ser)
|
SNV Germline |
Chr19:35250558 |
Likely pathogenic |
Progressive familial intrahepatic cholestasis type 1 |
Criteria Provided Single Submitter |
|
|
1 SubmittersRCV005860544 |
|
NM_001374385.1(ATP8B1):c.1473+1G>C
|
SNV Germline |
Chr18:57685071 |
Pathogenic |
Progressive familial intrahepatic cholestasis type 1 |
Criteria Provided Single Submitter |
|
|
1 SubmittersRCV005885647 |