Total 11 pathogenic variants reported for Pituitary stalk interruption syndrome 
Variant Name Variant Type Variant Genomic Location Clinical Significance Phenotype Condition Review Status ClinGen Allele dbSNP ID Variation/condition record
NM_000264.5(PTCH1):c.3929G>A (p.Gly1310Asp) SNV
Germline
Chr9:95447327 Conflicting classifications of pathogenicity Gorlin syndrome
Pituitary stalk interruption syndrome
Hereditary cancer-predisposing syndrome
Basal cell carcinoma, susceptibility to, 1
Gorlin syndrome
Holoprosencephaly 7
Condition: not provided
Criteria Provided
Conflicting Classifications
rs_773043616

6 SubmittersRCV000817077RCV001257287RCV002372312RCV002507429RCV003317381

NM_004629.2(FANCG):c.256C>T (p.Gln86Ter) SNV
Germline
Chr9:35078656 Likely pathogenic Fanconi anemia complementation group G
Pituitary stalk interruption syndrome
Fanconi anemia
Criteria Provided
Multiple Submitters
No Conflicts
rs_1829129603

3 SubmittersRCV001194943RCV001257285RCV002258150

NM_002941.4(ROBO1):c.3450C>A (p.Tyr1150Ter) SNV
Germline
Chr3:78633966 Pathogenic/Likely pathogenic Pituitary stalk interruption syndrome Criteria Provided
Multiple Submitters
No Conflicts
rs_1439248218

2 SubmittersRCV001257296

NM_002941.4(ROBO1):c.719G>C (p.Cys240Ser) SNV
Germline
Chr3:78717822 Conflicting classifications of pathogenicity Pituitary stalk interruption syndrome
Pituitary hormone deficiency, combined or isolated, 8
Criteria Provided
Conflicting Classifications
rs_2081940708

3 SubmittersRCV001257295RCV003224885

NM_001130969.3(NSMF):c.53C>A (p.Ser18Ter) SNV
Unknown
Chr9:137459050 Pathogenic Pituitary stalk interruption syndrome Criteria Provided
Single Submitter
rs_1831038541

1 SubmittersRCV001257291

NM_003070.5(SMARCA2):c.787T>A (p.Ser263Thr) SNV
Unknown
Chr9:2039897 Likely pathogenic Pituitary stalk interruption syndrome Criteria Provided
Single Submitter
rs_1819528679

1 SubmittersRCV001257301

NM_001378964.1(CDON):c.2764G>A (p.Glu922Lys) SNV
Germline
Chr11:125989646 Pathogenic Pituitary stalk interruption syndrome Criteria Provided
Single Submitter
rs_769676286

1 SubmittersRCV001257286

NM_001130823.3(DNMT1):c.2858A>G (p.Asp953Gly) SNV
Unknown
Chr19:10146387 Likely pathogenic Pituitary stalk interruption syndrome Criteria Provided
Single Submitter
rs_2038202226

1 SubmittersRCV001257292

NM_032551.5(KISS1R):c.710G>C (p.Arg237Pro) SNV
Germline
Chr19:920078 Likely pathogenic Pituitary stalk interruption syndrome Criteria Provided
Single Submitter
rs_1302076437

1 SubmittersRCV001257277