Total 20 pathogenic variants reported for Incontinentia pigmenti syndrome 
Variant Name Variant Type Variant Genomic Location Clinical Significance Phenotype Condition Review Status ClinGen Allele dbSNP ID Variation/condition record
NM_001099857.5(IKBKG):c.1219A>G (p.Met407Val) SNV
Germline
ChrX:154564420 Conflicting classifications of pathogenicity Incontinentia pigmenti syndrome
Condition: not provided
Criteria Provided
Conflicting Classifications
CA255887 rs_137853322

6 SubmittersRCV000012202RCV001582474

NM_001099857.5(IKBKG):c.1259A>G (p.Ter420Trp) SNV
Germline
ChrX:154564460 Pathogenic Incontinentia pigmenti syndrome
ECTODERMAL DYSPLASIA AND IMMUNODEFICIENCY 1, MALE-RESTRICTED
No Assertion Criteria Provided
CA121467 rs_137853321

1 SubmittersRCV000170521RCV000012203

NM_001099857.5(IKBKG):c.184C>T (p.Arg62Ter) SNV
Germline
ChrX:154552186 Pathogenic Incontinentia pigmenti syndrome
Condition: not provided
Criteria Provided
Single Submitter
CA255890 rs_137853323

2 SubmittersRCV000012205RCV000256164

NM_001099857.5(IKBKG):c.1217A>T (p.Asp406Val) SNV
Germline
ChrX:154564418 Likely pathogenic ECTODERMAL DYSPLASIA AND IMMUNODEFICIENCY 1, MALE-RESTRICTED
Incontinentia pigmenti syndrome
Ectodermal dysplasia and immunodeficiency 1
Criteria Provided
Single Submitter
CA121479 rs_137853327

2 SubmittersRCV000024285RCV001172474RCV004820819

NM_001099857.5(IKBKG):c.1117+5G>C SNV
Germline
ChrX:154564025 Likely pathogenic Condition: not provided
Incontinentia pigmenti syndrome
ECTODERMAL DYSPLASIA AND IMMUNODEFICIENCY 1, MALE-RESTRICTED
Criteria Provided
Single Submitter
CA658659077 rs_1557236796

2 SubmittersRCV000523987RCV001172481RCV001172480

NM_001099857.5(IKBKG):c.518+866C>T SNV
Germline
ChrX:154559516 Pathogenic IMMUNODEFICIENCY 33, MALE-RESTRICTED
Incontinentia pigmenti syndrome
Condition: not provided
Criteria Provided
Single Submitter
CA1139667923 rs_2071101767

2 SubmittersRCV000757923RCV001172475RCV006249677

NM_001099857.5(IKBKG):c.1117+1G>A SNV
Germline
ChrX:154564021 Pathogenic ECTODERMAL DYSPLASIA AND IMMUNODEFICIENCY 1, MALE-RESTRICTED
Incontinentia pigmenti syndrome
No Assertion Criteria Provided
CA415218958 rs_2071161458

1 SubmittersRCV001172484RCV001172485

NM_001099857.5(IKBKG):c.358C>T (p.Gln120Ter) SNV
Unknown
ChrX:154556335 Pathogenic Incontinentia pigmenti syndrome Criteria Provided
Single Submitter
CA415210292 rs_2071063100

1 SubmittersRCV001199162

NM_001099857.5(IKBKG):c.706C>T (p.Gln236Ter) SNV
Germline
ChrX:154561722 Pathogenic/Likely pathogenic Incontinentia pigmenti syndrome
Condition: not provided
Criteria Provided
Multiple Submitters
No Conflicts
CA415215288 rs_2071133474

2 SubmittersRCV001251338RCV002307712

NM_001099857.5(IKBKG):c.523C>T (p.Arg175Trp) SNV
Germline
ChrX:154560411 Conflicting classifications of pathogenicity Incontinentia pigmenti syndrome
not specified
Criteria Provided
Conflicting Classifications

2 SubmittersRCV005055249RCV005435479

NM_001099857.5(IKBKG):c.574C>T (p.Gln192Ter) SNV
Germline
ChrX:154560462 Likely pathogenic Incontinentia pigmenti syndrome Criteria Provided
Single Submitter

1 SubmittersRCV005880674