Total 46 pathogenic variants reported for Hb SS disease 
Variant Name Variant Type Variant Genomic Location Clinical Significance Phenotype Condition Review Status ClinGen Allele dbSNP ID Variation/condition record
NM_000518.4(HBB):c.19G>A (p.Glu7Lys) SNV
Germline
Chr11:5227003 Pathogenic/Likely pathogenic HEMOGLOBIN C
Malaria, resistance to
Hb SS disease
Condition: not provided
beta Thalassemia
9 conditions
Heinz body anemia
Beta-thalassemia HBB/LCRB
Inborn genetic diseases
Hereditary persistence of fetal hemoglobin
Sickle cell-hemoglobin C disease
HBB-related disorder
Inherited hemoglobinopathy
alpha Thalassemia
Dominant beta-thalassemia
Beta-thalassemia HBB/LCRB
Heinz body anemia
Hb SS disease
8 conditions
Criteria Provided
Multiple Submitters
No Conflicts
CA124780 rs_33930165

33 SubmittersRCV000016284RCV000016285RCV000202507RCV000224028RCV000576347RCV001535943RCV001813746RCV002288494RCV002415418RCV003137529RCV003150807RCV003335041RCV004017254RCV005357128RCV005049343

NM_000518.4(HBB):c.208G>A (p.Gly70Ser) SNV
Germline
Chr11:5226684 Conflicting classifications of pathogenicity HEMOGLOBIN CITY OF HOPE
beta Thalassemia
Condition: not provided
beta Thalassemia
Hb SS disease
Fetal hemoglobin quantitative trait locus 1
Dominant beta-thalassemia
not specified
Hb SS disease
Fetal hemoglobin quantitative trait locus 1
Hemoglobin E
9 conditions
8 conditions
Hemoglobinopathy
Hb SS disease
Heinz body anemia
Beta-thalassemia HBB/LCRB
alpha Thalassemia
Dominant beta-thalassemia
Criteria Provided
Conflicting Classifications
CA124797 rs_33947415

16 SubmittersRCV000016301RCV000396079RCV000587680RCV000709890RCV000855646RCV001004567RCV001107023RCV001107022RCV001535933RCV005049344RCV005417430RCV005364880

NM_000518.4(HBB):c.364G>C (p.Glu122Gln) SNV
Germline
Chr11:5225678 Pathogenic/Likely pathogenic Hb D-Los Angeles
beta Thalassemia
Hb SS disease
Condition: not provided
HBB-related disorder
Hemoglobin D disease
Heinz body anemia
8 conditions
Beta-thalassemia HBB/LCRB
Criteria Provided
Multiple Submitters
No Conflicts
CA124824 rs_33946267

19 SubmittersRCV000016317RCV000029994RCV000202465RCV000723826RCV000778329RCV001175348RCV002247348RCV005049345RCV005229799

NM_000518.5(HBB):c.79G>A (p.Glu27Lys) SNV
Germline
Chr11:5226943 Pathogenic Hemoglobin E
Beta-plus-thalassemia
Hemoglobin E/beta thalassemia disease
Malaria, resistance to
Hb SS disease
not specified
Condition: not provided
beta Thalassemia
Hemoglobin E disease
Anemia
9 conditions
Beta-thalassemia HBB/LCRB
Inborn genetic diseases
Malaria, susceptibility to
HBB-related disorder
8 conditions
7 conditions
Hereditary persistence of fetal hemoglobin
Hemoglobin E/beta- thalassemia
alpha Thalassemia
Dominant beta-thalassemia
Beta-thalassemia HBB/LCRB
Heinz body anemia
Hb SS disease
Criteria Provided
Multiple Submitters
No Conflicts
CA124838 rs_33950507

34 SubmittersRCV000016329RCV000016330RCV000016331RCV000016332RCV000202534RCV000506024RCV000521111RCV000496072RCV000778330RCV000853358RCV001536065RCV002288495RCV002415419RCV003989105RCV004532365RCV004795418RCV005222686RCV005229800RCV005252683RCV005357129

NM_000518.4(HBB):c.410G>A (p.Gly137Asp) SNV
Germline
Chr11:5225632 Conflicting classifications of pathogenicity not specified
beta Thalassemia
Hb SS disease
Condition: not provided
Beta-thalassemia HBB/LCRB
Inborn genetic diseases
Criteria Provided
Conflicting Classifications
CA124914 rs_33949486

7 SubmittersRCV000016385RCV000029996RCV001004558RCV001284489RCV002290955RCV002321485

NM_000518.4(HBB):c.92G>C (p.Arg31Thr) SNV
Germline
Chr11:5226930 Pathogenic beta Thalassemia
Condition: not provided
Hb SS disease
Beta-thalassemia major
Beta-thalassemia HBB/LCRB
HBB-related disorder
8 conditions
Criteria Provided
Multiple Submitters
No Conflicts
CA213890 rs_33960103

18 SubmittersRCV000016432RCV000506942RCV001004351RCV001794452RCV003338382RCV004732545RCV005049349

NM_000518.5(HBB):c.82G>T (p.Ala28Ser) SNV
Germline
Chr11:5226940 Pathogenic beta Thalassemia
Hemoglobinopathy
Hb SS disease
HEMOGLOBIN KNOSSOS
Beta-plus-thalassemia
Beta-Knossos-thalassemia
Malaria, susceptibility to
Beta-thalassemia HBB/LCRB
Condition: not provided
8 conditions
Criteria Provided
Multiple Submitters
No Conflicts
CA124983 rs_35424040

15 SubmittersRCV000169609RCV000780311RCV001004353RCV000016439RCV000016440RCV000016441RCV003992156RCV005623063RCV000757368RCV005049350

NM_000518.5(HBB):c.389C>T (p.Ala130Val) SNV
Germline
Chr11:5225653 Conflicting classifications of pathogenicity HEMOGLOBIN LA DESIRADE
Hb SS disease
Condition: not provided
Hemoglobinopathy
8 conditions
Criteria Provided
Conflicting Classifications
CA124993 rs_111645889

7 SubmittersRCV000016450RCV001004559RCV001284158RCV001804165RCV005049351

NM_000518.4(HBB):c.364G>A (p.Glu122Lys) SNV
Germline
Chr11:5225678 Pathogenic/Likely pathogenic HEMOGLOBIN O (ARAB)
HEMOGLOBIN EGYPT
beta Thalassemia
Hb SS disease
Condition: not provided
Sickle cell-Hemoglobin O Arab disease
9 conditions
Criteria Provided
Multiple Submitters
No Conflicts
CA125070 rs_33946267

11 SubmittersRCV000016524RCV000016525RCV000029993RCV000202511RCV000508438RCV000587075RCV002476974

NM_000518.4(HBB):c.332T>C (p.Leu111Pro) SNV
Germline
Chr11:5225710 Pathogenic HEMOGLOBIN SHOWA-YAKUSHIJI
Beta-plus-thalassemia
Beta-Showa-Yakushiji thalassemia
beta Thalassemia
Hb SS disease
Condition: not provided
Beta-thalassemia HBB/LCRB
Criteria Provided
Multiple Submitters
No Conflicts
CA125166 rs_35256489

7 SubmittersRCV000016598RCV000016599RCV000016600RCV000589517RCV001004561RCV002476975RCV004689418

NM_000518.5(HBB):c.52A>T (p.Lys18Ter) SNV
Germline
Chr11:5226970 Pathogenic Beta zero thalassemia
beta Thalassemia
Condition: not provided
9 conditions
Hb SS disease
Beta-thalassemia HBB/LCRB
8 conditions
8 conditions
Criteria Provided
Multiple Submitters
No Conflicts
CA125257 rs_33986703

17 SubmittersRCV000016655RCV000020337RCV000507505RCV000763255RCV001004355RCV002288498RCV005049356RCV005400415

NM_000518.5(HBB):c.118C>T (p.Gln40Ter) SNV
Germline
Chr11:5226774 Pathogenic Condition: not provided
beta Thalassemia
Hb SS disease
Beta zero thalassemia
Heinz body anemia
Beta-thalassemia HBB/LCRB
Malaria, susceptibility to
Inborn genetic diseases
HBB-related disorder
8 conditions
alpha Thalassemia
Criteria Provided
Multiple Submitters
No Conflicts
CA125259 rs_11549407

40 SubmittersRCV000254827RCV000379715RCV001004570RCV000016656RCV002221479RCV002288499RCV003987324RCV002336086RCV004532366RCV005003361RCV001197268

NM_000518.5(HBB):c.47G>A (p.Trp16Ter) SNV
Germline
Chr11:5226975 Pathogenic Beta zero thalassemia
beta Thalassemia
Hb SS disease
Condition: not provided
Beta-thalassemia HBB/LCRB
8 conditions
Criteria Provided
Multiple Submitters
No Conflicts
CA125261 rs_63750783

17 SubmittersRCV000016657RCV000576738RCV001004356RCV000508601RCV003985073RCV005049357

NM_000518.5(HBB):c.364G>T (p.Glu122Ter) SNV
Germline
Chr11:5225678 Pathogenic Dominant beta-thalassemia
Condition: not provided
Hb SS disease
beta Thalassemia
Beta-thalassemia HBB/LCRB
Criteria Provided
Multiple Submitters
No Conflicts
CA125263 rs_33946267

8 SubmittersRCV000016658RCV000507274RCV001004560RCV000984185RCV005430462

NM_000518.5(HBB):c.130G>T (p.Glu44Ter) SNV
Germline
Chr11:5226762 Pathogenic Beta zero thalassemia
Condition: not provided
Hemoglobinopathy
beta Thalassemia
Hb SS disease
Beta-thalassemia HBB/LCRB
8 conditions
Criteria Provided
Multiple Submitters
No Conflicts
CA125267 rs_33922842

12 SubmittersRCV000016660RCV000506797RCV000780310RCV000665678RCV001004568RCV004795419RCV005049358

NM_000518.5(HBB):c.2T>G (p.Met1Arg) SNV
Germline
Chr11:5227020 Pathogenic Beta zero thalassemia
Condition: not provided
beta Thalassemia
Beta-thalassemia HBB/LCRB
Hb SS disease
8 conditions
Criteria Provided
Multiple Submitters
No Conflicts
CA125299 rs_33941849

10 SubmittersRCV000016691RCV000505904RCV000664667RCV005430107RCV001004361RCV005049363

NM_000518.5(HBB):c.92+1G>A SNV
Germline
Chr11:5226929 Pathogenic Beta zero thalassemia
beta Thalassemia
Condition: not provided
Hb SS disease
Fetal hemoglobin quantitative trait locus 1
Beta-thalassemia HBB/LCRB
Dominant beta-thalassemia
Beta-thalassemia HBB/LCRB
Dominant beta-thalassemia
8 conditions
Erythrocytosis, familial, 6
Inborn genetic diseases
Criteria Provided
Multiple Submitters
No Conflicts
CA125303 rs_33971440

32 SubmittersRCV000016694RCV000020340RCV000390929RCV001004350RCV001329338RCV002288501RCV005051735RCV004819209RCV005003368RCV005357131RCV004975260

NM_000518.5(HBB):c.92+1G>T SNV
Germline
Chr11:5226929 Pathogenic beta Thalassemia
Condition: not provided
Beta zero thalassemia
HBB-related disorder
Inborn genetic diseases
8 conditions
Hb SS disease
Beta-thalassemia HBB/LCRB
Criteria Provided
Multiple Submitters
No Conflicts
CA125304 rs_33971440

17 SubmittersRCV000169505RCV000507580RCV000016695RCV004532369RCV002444432RCV005003369RCV001004349RCV004689419

NM_000518.5(HBB):c.315+1G>A SNV
Germline
Chr11:5226576 Pathogenic Beta zero thalassemia
beta Thalassemia
Condition: not provided
Dominant beta-thalassemia
not specified
Beta-thalassemia HBB/LCRB
Hb SS disease
8 conditions
Malaria, susceptibility to
Erythrocytosis, familial, 6
Criteria Provided
Multiple Submitters
No Conflicts
CA125305 rs_33945777

28 SubmittersRCV000016696RCV000020332RCV000255349RCV001723572RCV001731303RCV002288502RCV001004566RCV005003370RCV003987325RCV005357132

NM_000518.5(HBB):c.92+5G>C SNV
Germline
Chr11:5226925 Pathogenic beta Thalassemia
Condition: not provided
Hb SS disease
9 conditions
Beta-plus-thalassemia
Beta-thalassemia major
Beta-thalassemia HBB/LCRB
Inborn genetic diseases
Hereditary persistence of fetal hemoglobin
Malaria, susceptibility to
Hemoglobin E/beta- thalassemia
HBB-related disorder
Dominant beta-thalassemia
8 conditions
Criteria Provided
Multiple Submitters
No Conflicts
CA125310 rs_33915217

34 SubmittersRCV000020341RCV000255746RCV001004348RCV000763253RCV000016705RCV001794453RCV002288503RCV002444433RCV003445071RCV003987326RCV005252684RCV004732547RCV004814907RCV005049365

NM_000518.5(HBB):c.92+5G>A SNV
Germline
Chr11:5226925 Pathogenic Beta-plus-thalassemia
beta Thalassemia
8 conditions
Hb SS disease
Condition: not provided
Criteria Provided
Multiple Submitters
No Conflicts
CA125312 rs_33915217

9 SubmittersRCV000016707RCV000030004RCV005049367RCV005252685RCV001216321

NM_000518.5(HBB):c.92+6T>C SNV
Germline
Chr11:5226924 Pathogenic/Likely pathogenic Beta-plus-thalassemia
beta Thalassemia
Condition: not provided
9 conditions
Hb SS disease
Heinz body anemia
Inborn genetic diseases
Malaria, susceptibility to
HBB-related disorder
Beta-thalassemia HBB/LCRB
8 conditions
Beta thalassemia intermedia
Erythrocytosis, familial, 6
Criteria Provided
Multiple Submitters
No Conflicts
CA125313 rs_35724775

27 SubmittersRCV000016708RCV000415353RCV000417932RCV000763252RCV001004347RCV002247349RCV002371774RCV003988822RCV004532370RCV004566748RCV005049368RCV005406746RCV005357133

NM_000518.5(HBB):c.93-21G>A SNV
Germline
Chr11:5226820 Pathogenic/Likely pathogenic Beta-plus-thalassemia
beta Thalassemia
Condition: not provided
Fetal hemoglobin quantitative trait locus 1
Beta-thalassemia major
Inborn genetic diseases
Beta-thalassemia HBB/LCRB
Malaria, susceptibility to
8 conditions
9 conditions
Hb SS disease
Erythrocytosis, familial, 6
Criteria Provided
Multiple Submitters
No Conflicts
CA125315 rs_35004220

37 SubmittersRCV000016712RCV000020343RCV000799079RCV001262998RCV000030008RCV002371775RCV002288504RCV003989289RCV005049369RCV000763251RCV001004346RCV005357134

NM_000518.5(HBB):c.316-106C>G SNV
Germline
Chr11:5225832 Pathogenic/Likely pathogenic Beta-plus-thalassemia
beta Thalassemia
Condition: not provided
Hb SS disease
Dominant beta-thalassemia
Beta-thalassemia HBB/LCRB
HBB-related disorder
Erythrocytosis, familial, 6
8 conditions
Criteria Provided
Multiple Submitters
No Conflicts
CA125316 rs_34690599

24 SubmittersRCV000016715RCV000029978RCV000506445RCV001004564RCV002272021RCV002288505RCV004732548RCV005357135RCV005003371

NM_000518.5(HBB):c.316-197C>T SNV
Germline
Chr11:5225923 Pathogenic beta Thalassemia
Condition: not provided
Beta zero thalassemia
HBB-related disorder
Hb SS disease
8 conditions
Beta-thalassemia major
Criteria Provided
Multiple Submitters
No Conflicts
CA125317 rs_34451549

13 SubmittersRCV000020334RCV000794203RCV000016716RCV004532371RCV001004565RCV005049370RCV000029984

NM_000518.5(HBB):c.75T>A (p.Gly25=) SNV
Germline
Chr11:5226947 Pathogenic/Likely pathogenic Beta-plus-thalassemia
beta Thalassemia
Condition: not provided
Hb SS disease
9 conditions
Criteria Provided
Multiple Submitters
No Conflicts
CA125318 rs_33951465

10 SubmittersRCV000016717RCV000030002RCV000508672RCV001004354RCV002496383

NM_000518.5(HBB):c.-78A>C SNV
Germline
Chr11:5227099 Pathogenic Beta-plus-thalassemia
beta Thalassemia
Condition: not provided
8 conditions
Hb SS disease
Beta-thalassemia HBB/LCRB
Criteria Provided
Multiple Submitters
No Conflicts
CA125328 rs_33931746

10 SubmittersRCV000016728RCV000589656RCV000508592RCV005003374RCV001004363RCV005430108

NM_000518.5(HBB):c.-78A>G SNV
Germline
Chr11:5227099 Pathogenic/Likely pathogenic Beta-plus-thalassemia
beta Thalassemia
Condition: not provided
Hb SS disease
Beta-thalassemia HBB/LCRB
8 conditions
Criteria Provided
Multiple Submitters
No Conflicts
CA125329 rs_33931746

12 SubmittersRCV000016729RCV000029960RCV000506257RCV001004362RCV004795422RCV005049374

NM_000518.5(HBB):c.316-2A>G SNV
Germline
Chr11:5225728 Pathogenic beta Thalassemia
Beta zero thalassemia
Hb SS disease
Condition: not provided
9 conditions
8 conditions
Criteria Provided
Multiple Submitters
No Conflicts
CA341711 rs_33914668

13 SubmittersRCV000020336RCV000016701RCV001004562RCV000508360RCV002504815RCV003389313

NM_000518.5(HBB):c.-137C>T SNV
Germline
Chr11:5227158 Pathogenic/Likely pathogenic beta Thalassemia
Hb SS disease
Condition: not provided
Beta thalassemia intermedia
8 conditions
Criteria Provided
Multiple Submitters
No Conflicts
CA213884 rs_33941377

7 SubmittersRCV000445650RCV001004365RCV001379381RCV003317048RCV005049386

NM_000518.5(HBB):c.-31C>T SNV
Germline
Chr11:5227052 Conflicting classifications of pathogenicity beta Thalassemia
Condition: not provided
Hb SS disease
Hemoglobin E
Fetal hemoglobin quantitative trait locus 1
not specified
Dominant beta-thalassemia
8 conditions
HBB-related disorder
Criteria Provided
Conflicting Classifications
CA342844 rs_63750628

9 SubmittersRCV000029956RCV000755548RCV001104361RCV001104363RCV001104362RCV001420720RCV002272029RCV005049387RCV004732554

NM_000518.5(HBB):c.324C>T (p.Gly108=) SNV
Germline
Chr11:5225718 Conflicting classifications of pathogenicity Condition: not provided
not specified
Fetal hemoglobin quantitative trait locus 1
beta Thalassemia
Hemoglobin E
Hb SS disease
8 conditions
Inborn genetic diseases
Criteria Provided
Conflicting Classifications
CA342866 rs_193922562

8 SubmittersRCV000759069RCV000507146RCV001103966RCV001103967RCV001103968RCV001103969RCV005049393RCV005572269

NM_000518.5(HBB):c.402G>C (p.Val134=) SNV
Germline
Chr11:5225640 Conflicting classifications of pathogenicity beta Thalassemia
Condition: not provided
Fetal hemoglobin quantitative trait locus 1
Hb SS disease
Hemoglobin E
Inborn genetic diseases
HBB-related disorder
Criteria Provided
Conflicting Classifications
CA342870 rs_113082294

9 SubmittersRCV000029995RCV000860902RCV001107580RCV001107582RCV001107581RCV002354172RCV004532419

NM_000518.5(HBB):c.*110T>C SNV
Germline
Chr11:5225488 Pathogenic Beta-plus-thalassemia
Hb SS disease
beta Thalassemia
Condition: not provided
8 conditions
Beta-thalassemia HBB/LCRB
Criteria Provided
Multiple Submitters
No Conflicts
CA213889 rs_33978907

14 SubmittersRCV000016730RCV001004557RCV000445649RCV000506540RCV005049394RCV004566754

NM_000518.5(HBB):c.274C>T (p.Leu92=) SNV
Germline
Chr11:5226618 Conflicting classifications of pathogenicity Fetal hemoglobin quantitative trait locus 1
Hemoglobin E
not specified
Condition: not provided
beta Thalassemia
Hb SS disease
Inborn genetic diseases
Criteria Provided
Conflicting Classifications
CA5839740 rs_769583496

6 SubmittersRCV001104255RCV001104256RCV000507587RCV000756242RCV001104257RCV001104258RCV004629226

NM_000518.5(HBB):c.294C>T (p.His98=) SNV
Germline
Chr11:5226598 Conflicting classifications of pathogenicity not specified
Fetal hemoglobin quantitative trait locus 1
beta Thalassemia
Hemoglobin E
Hb SS disease
Condition: not provided
Inborn genetic diseases
Criteria Provided
Conflicting Classifications
CA5839738 rs_34515413

7 SubmittersRCV000506063RCV001103971RCV001103970RCV001103972RCV001104254RCV000585933RCV003159645

NM_000518.5(HBB):c.246C>A (p.Leu82=) SNV
Germline
Chr11:5226646 Conflicting classifications of pathogenicity Condition: not provided
Hb SS disease
Fetal hemoglobin quantitative trait locus 1
not specified
beta Thalassemia
Hemoglobin E
Criteria Provided
Conflicting Classifications
CA5839741 rs_145669504

6 SubmittersRCV000759796RCV001104261RCV001107021RCV000505921RCV001104259RCV001104260

NM_000518.5(HBB):c.316-7C>A SNV
Germline
Chr11:5225733 Conflicting classifications of pathogenicity beta Thalassemia
Hb SS disease
not specified
Condition: not provided
Beta-thalassemia HBB/LCRB
Criteria Provided
Conflicting Classifications
CA217112896 rs_34483965

7 SubmittersRCV000667076RCV001004563RCV001000150RCV001283996RCV005430554

NM_000518.5(HBB):c.85C>T (p.Leu29=) SNV
Germline
Chr11:5226937 Conflicting classifications of pathogenicity beta Thalassemia
Fetal hemoglobin quantitative trait locus 1
Hemoglobin E
Hb SS disease
not specified
Condition: not provided
Criteria Provided
Conflicting Classifications
CA217115132 rs_33958088

3 SubmittersRCV001107681RCV001107680RCV001107682RCV001107683RCV001174809RCV002069760