Total 18 pathogenic variants reported for Filippi syndrome 
Variant Name Variant Type Variant Genomic Location Clinical Significance Phenotype Condition Review Status ClinGen Allele dbSNP ID Variation/condition record
NM_152515.5(CKAP2L):c.2T>C (p.Met1Thr) SNV
Germline
Chr2:112764597 Pathogenic Filippi syndrome No Assertion Criteria Provided
CA175011 rs_548949031

1 SubmittersRCV000149780

NM_152515.5(CKAP2L):c.162T>G (p.Ile54Met) SNV
Germline
Chr2:112757209 Conflicting classifications of pathogenicity Condition: not provided
Filippi syndrome
Criteria Provided
Conflicting Classifications
CA1836897 rs_201346406

3 SubmittersRCV000955294RCV001331778

NM_152515.5(CKAP2L):c.1822+1G>A SNV
Germline
Chr2:112742705 Pathogenic Filippi syndrome Criteria Provided
Single Submitter
CA348291762 rs_1680053234

1 SubmittersRCV001264831

NM_152515.5(CKAP2L):c.2066G>A (p.Arg689His) SNV
Germline
Chr2:112738995 Pathogenic Condition: not provided
Filippi syndrome
Criteria Provided
Single Submitter
CA1836472 rs_201984824

2 SubmittersRCV001344516RCV001730757

NM_152515.5(CKAP2L):c.1186A>G (p.Ile396Val) SNV
Germline
Chr2:112756185 Conflicting classifications of pathogenicity Condition: not provided
Filippi syndrome
Criteria Provided
Conflicting Classifications
CA1836707 rs_772245567

2 SubmittersRCV002632373RCV004725546

NM_152515.5(CKAP2L):c.1604G>A (p.Gly535Asp) SNV
Germline
Chr2:112746574 Likely pathogenic Filippi syndrome Criteria Provided
Single Submitter
CA53678607 rs_766585648

1 SubmittersRCV003989342

NM_152515.5(CKAP2L):c.46C>T (p.Gln16Ter) SNV
Germline
Chr2:112762561 Pathogenic Filippi syndrome Criteria Provided
Single Submitter

1 SubmittersRCV005235822