Total 231 pathogenic variants reported for Beckwith-Wiedemann syndrome 
Variant Name Variant Type Variant Genomic Location Clinical Significance Phenotype Condition Review Status ClinGen Allele dbSNP ID Variation/condition record
NM_000218.3(KCNQ1):c.1032G>A (p.Ala344=) SNV
Germline
Chr11:2583545 Pathogenic Long QT syndrome 1
Long QT syndrome
Long QT syndrome 2
Condition: not provided
Cardiovascular phenotype
Beckwith-Wiedemann syndrome
Congenital long QT syndrome
Reviewed By Expert Panel
CA005005 rs_1800171

17 SubmittersRCV000003283RCV000045941RCV000498423RCV000182159RCV000621184RCV002247243RCV004017223

NM_000218.3(KCNQ1):c.1747C>T (p.Arg583Cys) SNV
Germline
Chr11:2777990 Conflicting classifications of pathogenicity Acquired susceptibility to long QT syndrome 1
Long QT syndrome 1
Congenital long QT syndrome
Condition: not provided
Long QT syndrome 1
Beckwith-Wiedemann syndrome
Short QT syndrome type 2
Atrial fibrillation, familial, 3
Jervell and Lange-Nielsen syndrome 1
KCNQ1-related disorder
Long QT syndrome
Cardiovascular phenotype
Cardiac arrhythmia
Long QT syndrome 1
Short QT syndrome type 2
Atrial fibrillation, familial, 3
Jervell and Lange-Nielsen syndrome 1
Criteria Provided
Conflicting Classifications
CA006297 rs_17221854

12 SubmittersRCV000003292RCV000003291RCV000057628RCV000182219RCV000762837RCV001824559RCV001851606RCV004018545RCV003591618RCV005364866

NM_000218.3(KCNQ1):c.805G>A (p.Gly269Ser) SNV
Germline
Chr11:2572870 Pathogenic Long QT syndrome 1
Congenital long QT syndrome
Condition: not provided
Long QT syndrome
not specified
Short QT syndrome type 2
Long QT syndrome 1
Atrial fibrillation, familial, 3
Beckwith-Wiedemann syndrome
Jervell and Lange-Nielsen syndrome 1
Cardiovascular phenotype
Cardiac arrhythmia
Criteria Provided
Multiple Submitters
No Conflicts
CA008278 rs_120074193

13 SubmittersRCV000003294RCV000057765RCV000182118RCV000477568RCV001002562RCV000762834RCV002408447RCV005402795

NM_001122630.2(CDKN1C):c.106C>T (p.Gln36Ter) SNV
Germline
Chr11:2885351 Pathogenic Beckwith-Wiedemann syndrome No Assertion Criteria Provided
CA254534 rs_137852766

1 SubmittersRCV000009287

NM_001122630.2(CDKN1C):c.707C>A (p.Ser236Ter) SNV
Germline
Chr11:2884750 Pathogenic Beckwith-Wiedemann syndrome Criteria Provided
Single Submitter
CA254540 rs_104894200

2 SubmittersRCV000009290

NM_001122630.2(CDKN1C):c.812C>G (p.Ser271Ter) SNV
Germline
Chr11:2884110 Pathogenic/Likely pathogenic Beckwith-Wiedemann syndrome
Condition: not provided
Criteria Provided
Multiple Submitters
No Conflicts
CA254543 rs_267606716

3 SubmittersRCV000009291RCV000521869

NM_001122630.2(CDKN1C):c.812C>A (p.Ser271Ter) SNV
Germline
Chr11:2884110 Pathogenic Beckwith-Wiedemann syndrome No Assertion Criteria Provided
CA254546 rs_267606716

1 SubmittersRCV000009292

NM_001122630.2(CDKN1C):c.787G>A (p.Asp263Asn) SNV
Germline
Chr11:2884670 Pathogenic IMAGe syndrome
Beckwith-Wiedemann syndrome
Inborn genetic diseases
Criteria Provided
Multiple Submitters
No Conflicts
CA260081 rs_387907225

3 SubmittersRCV004814928RCV001380060RCV002513231

NM_000218.3(KCNQ1):c.1075C>T (p.Gln359Ter) SNV
Germline
Chr11:2585254 Pathogenic Long QT syndrome
Condition: not provided
Cardiac arrhythmia
Cardiovascular phenotype
Atrial fibrillation, familial, 3
Beckwith-Wiedemann syndrome
Jervell and Lange-Nielsen syndrome 1
Short QT syndrome type 2
Long QT syndrome 1
Long QT syndrome 1
KCNQ1-related disorder
Criteria Provided
Multiple Submitters
No Conflicts
CA005174 rs_397508075

13 SubmittersRCV000045954RCV000223715RCV001841622RCV000617465RCV002496699RCV003319304RCV004732637

NM_000218.3(KCNQ1):c.1085A>G (p.Lys362Arg) SNV
Germline
Chr11:2585264 Pathogenic/Likely pathogenic Long QT syndrome
Congenital long QT syndrome
Condition: not provided
Short QT syndrome type 2
Beckwith-Wiedemann syndrome
Long QT syndrome 1
Jervell and Lange-Nielsen syndrome 1
Atrial fibrillation, familial, 3
Long QT syndrome 1
Cardiac arrhythmia
KCNQ1-related disorder
Short QT syndrome type 2
Long QT syndrome 1
Jervell and Lange-Nielsen syndrome 1
Atrial fibrillation, familial, 3
Cardiovascular phenotype
Short QT syndrome type 2
Long QT syndrome 1
Atrial fibrillation, familial, 3
Criteria Provided
Multiple Submitters
No Conflicts
CA005223 rs_12720458

23 SubmittersRCV000045957RCV000057548RCV000223836RCV000762835RCV000851291RCV001841623RCV003335077RCV003448253RCV003162397RCV003330078

NM_000218.3(KCNQ1):c.1354C>T (p.Arg452Trp) SNV
Germline
Chr11:2588815 Conflicting classifications of pathogenicity Cardiovascular phenotype
Long QT syndrome
Congenital long QT syndrome
Condition: not provided
Jervell and Lange-Nielsen syndrome 1
Atrial fibrillation, familial, 3
Long QT syndrome 1
Short QT syndrome type 2
Beckwith-Wiedemann syndrome
Cardiac arrhythmia
Long QT syndrome 1
Criteria Provided
Conflicting Classifications
CA005672 rs_140452381

11 SubmittersRCV000621439RCV000148551RCV000057582RCV000224680RCV000764974RCV001841631RCV001248784

NM_000218.3(KCNQ1):c.1588C>T (p.Gln530Ter) SNV
Germline
Chr11:2768917 Pathogenic Long QT syndrome
Condition: not provided
Long QT syndrome 1
Short QT syndrome type 2
Atrial fibrillation, familial, 3
Beckwith-Wiedemann syndrome
Jervell and Lange-Nielsen syndrome 1
Cardiovascular phenotype
Long QT syndrome 1
Cardiac arrhythmia
Jervell and Lange-Nielsen syndrome 1
KCNQ1-related disorder
Criteria Provided
Multiple Submitters
No Conflicts
CA005967 rs_397508097

17 SubmittersRCV000046003RCV000182204RCV000515204RCV000619891RCV001029805RCV001841634RCV001847642RCV004528255

NM_000218.3(KCNQ1):c.1615C>T (p.Arg539Trp) SNV
Germline
Chr11:2775984 Pathogenic/Likely pathogenic Long QT syndrome
Congenital long QT syndrome
Condition: not provided
Atrial fibrillation, familial, 3
Beckwith-Wiedemann syndrome
Long QT syndrome 1
Jervell and Lange-Nielsen syndrome 1
Short QT syndrome type 2
KCNQ1-related disorder
Long QT syndrome 1
Cardiovascular phenotype
Criteria Provided
Multiple Submitters
No Conflicts
CA005994 rs_199472795

14 SubmittersRCV000046006RCV000057604RCV000223851RCV000762836RCV004732638RCV001248800RCV002390194

NM_000218.3(KCNQ1):c.1664G>A (p.Arg555His) SNV
Germline
Chr11:2776033 Pathogenic/Likely pathogenic Long QT syndrome
Congenital long QT syndrome
Condition: not provided
Cardiovascular phenotype
Cardiac arrhythmia
Atrial fibrillation, familial, 3
Beckwith-Wiedemann syndrome
Long QT syndrome 1
Jervell and Lange-Nielsen syndrome 1
Short QT syndrome type 2
Long QT syndrome 1
Criteria Provided
Multiple Submitters
No Conflicts
CA006147 rs_199472800

13 SubmittersRCV000046012RCV000057614RCV000182212RCV000619418RCV003591637RCV002483049RCV003319308

NM_000218.3(KCNQ1):c.1697C>T (p.Ser566Phe) SNV
Germline
Chr11:2776997 Pathogenic/Likely pathogenic Long QT syndrome
Congenital long QT syndrome
Condition: not provided
Long QT syndrome 1
not specified
Atrial fibrillation, familial, 3
Beckwith-Wiedemann syndrome
Jervell and Lange-Nielsen syndrome 1
Short QT syndrome type 2
Long QT syndrome 1
Cardiovascular phenotype
Criteria Provided
Multiple Submitters
No Conflicts
CA006211 rs_199472804

13 SubmittersRCV000046015RCV000057619RCV000223686RCV000477954RCV000678814RCV002504937RCV002399406

NM_000218.3(KCNQ1):c.1702G>A (p.Gly568Arg) SNV
Germline
Chr11:2777002 Pathogenic/Likely pathogenic Condition: not provided
Congenital long QT syndrome
not specified
Cardiovascular phenotype
Atrial fibrillation, familial, 3
Beckwith-Wiedemann syndrome
Jervell and Lange-Nielsen syndrome 1
Short QT syndrome type 2
Long QT syndrome 1
Long QT syndrome
Criteria Provided
Multiple Submitters
No Conflicts
CA006232 rs_199472807

8 SubmittersRCV000505735RCV000057622RCV000678815RCV000250706RCV002496701RCV001192510

NM_000218.3(KCNQ1):c.1781G>A (p.Arg594Gln) SNV
Germline
Chr11:2778024 Pathogenic/Likely pathogenic Congenital long QT syndrome
Long QT syndrome
Condition: not provided
Cardiovascular phenotype
Long QT syndrome 1
Jervell and Lange-Nielsen syndrome 1
Atrial fibrillation, familial, 3
Short QT syndrome type 2
Beckwith-Wiedemann syndrome
Long QT syndrome 1
Jervell and Lange-Nielsen syndrome 1
Long QT syndrome 1
Cardiac arrhythmia
Atrial fibrillation, familial, 3
Short QT syndrome type 2
Long QT syndrome 1
Jervell and Lange-Nielsen syndrome 1
Criteria Provided
Multiple Submitters
No Conflicts
CA006388 rs_199472815

20 SubmittersRCV000057637RCV000046031RCV000182228RCV000247524RCV001258107RCV002496702RCV001731336RCV003591639RCV003224128

NM_000218.3(KCNQ1):c.19C>T (p.Pro7Ser) SNV
Germline
Chr11:2445117 Conflicting classifications of pathogenicity Congenital long QT syndrome
Long QT syndrome 1
not specified
Atrial fibrillation, familial, 3
Beckwith-Wiedemann syndrome
Long QT syndrome 1
Jervell and Lange-Nielsen syndrome 1
Short QT syndrome type 2
Cardiovascular phenotype
Long QT syndrome
Condition: not provided
Criteria Provided
Conflicting Classifications
CA006651 rs_199473443

9 SubmittersRCV000057653RCV000495985RCV000454712RCV002483050RCV004018946RCV001305107RCV002223779

NM_000218.3(KCNQ1):c.513C>G (p.Tyr171Ter) SNV
Germline
Chr11:2570663 Pathogenic Long QT syndrome
Cardiovascular phenotype
Atrial fibrillation, familial, 3
Beckwith-Wiedemann syndrome
Jervell and Lange-Nielsen syndrome 1
Short QT syndrome type 2
Long QT syndrome 1
Condition: not provided
Criteria Provided
Multiple Submitters
No Conflicts
CA007295 rs_139042529

4 SubmittersRCV000046070RCV004018949RCV002490607RCV005252717

NM_000218.3(KCNQ1):c.520C>T (p.Arg174Cys) SNV
Germline
Chr11:2570670 Pathogenic/Likely pathogenic Long QT syndrome
Congenital long QT syndrome
Condition: not provided
Long QT syndrome 1
Cardiac arrhythmia
Cardiovascular phenotype
Atrial fibrillation, familial, 3
Beckwith-Wiedemann syndrome
Jervell and Lange-Nielsen syndrome 1
Short QT syndrome type 2
Long QT syndrome 1
Criteria Provided
Multiple Submitters
No Conflicts
CA007321 rs_199472696

13 SubmittersRCV000046072RCV000057689RCV000182078RCV000587627RCV001841647RCV002345338RCV002504938

NM_000218.3(KCNQ1):c.521G>A (p.Arg174His) SNV
Germline
Chr11:2570671 Pathogenic/Likely pathogenic Condition: not provided
Congenital long QT syndrome
Long QT syndrome 1
Long QT syndrome
Atrial fibrillation, familial, 3
Beckwith-Wiedemann syndrome
Jervell and Lange-Nielsen syndrome 1
Short QT syndrome type 2
Long QT syndrome 1
Cardiovascular phenotype
Criteria Provided
Multiple Submitters
No Conflicts
CA007329 rs_199472697

9 SubmittersRCV000223741RCV000057690RCV000984322RCV001386000RCV002496703RCV002336182

NM_000218.3(KCNQ1):c.604G>A (p.Asp202Asn) SNV
Germline
Chr11:2570754 Pathogenic/Likely pathogenic Congenital long QT syndrome
Condition: not provided
Long QT syndrome
Cardiovascular phenotype
Atrial fibrillation, familial, 3
Beckwith-Wiedemann syndrome
Long QT syndrome 1
Jervell and Lange-Nielsen syndrome 1
Short QT syndrome type 2
Long QT syndrome 1
Jervell and Lange-Nielsen syndrome
Cardiac arrhythmia
Criteria Provided
Multiple Submitters
No Conflicts
CA007717 rs_199472702

13 SubmittersRCV000057718RCV000182091RCV001379267RCV000620936RCV002483052RCV003236664RCV003492374RCV003591645

NM_000218.3(KCNQ1):c.674C>T (p.Ser225Leu) SNV
Germline
Chr11:2571394 Likely pathogenic Congenital long QT syndrome
Long QT syndrome
Condition: not provided
Long QT syndrome 1
KCNQ1-related disorder
Cardiac arrhythmia
Cardiovascular phenotype
Atrial fibrillation, familial, 3
Short QT syndrome type 2
Beckwith-Wiedemann syndrome
Long QT syndrome 1
Jervell and Lange-Nielsen syndrome 1
Reviewed By Expert Panel
CA007870 rs_199473456

13 SubmittersRCV000057730RCV000046103RCV000182302RCV001256914RCV003335079RCV001841649RCV002362677RCV002504939

NM_000218.3(KCNQ1):c.692G>A (p.Arg231His) SNV
Germline
Chr11:2572021 Pathogenic Long QT syndrome
Congenital long QT syndrome
Condition: not provided
Atrial fibrillation, familial, 3
Long QT syndrome 1
Atrial fibrillation, familial, 3
Beckwith-Wiedemann syndrome
Jervell and Lange-Nielsen syndrome 1
Short QT syndrome type 2
Long QT syndrome 1
Cardiovascular phenotype
Criteria Provided
Multiple Submitters
No Conflicts
CA007925 rs_199472709

9 SubmittersRCV000046107RCV000057734RCV000182101RCV000115007RCV000115008RCV000762833RCV002371883

NM_000218.3(KCNQ1):c.797T>C (p.Leu266Pro) SNV
Germline
Chr11:2572862 Pathogenic/Likely pathogenic Long QT syndrome
Congenital long QT syndrome
Condition: not provided
Cardiovascular phenotype
Long QT syndrome 1
Short QT syndrome type 2
Atrial fibrillation, familial, 3
Beckwith-Wiedemann syndrome
Jervell and Lange-Nielsen syndrome 1
Long QT syndrome 1
Cardiac arrhythmia
Criteria Provided
Multiple Submitters
No Conflicts
CA008262 rs_199473460

15 SubmittersRCV000046131RCV000057763RCV000182116RCV000250332RCV002483053RCV004786325RCV005401309

NM_000218.3(KCNQ1):c.815G>A (p.Gly272Asp) SNV
Germline
Chr11:2572880 Pathogenic/Likely pathogenic Long QT syndrome
Congenital long QT syndrome
Condition: not provided
Cardiovascular phenotype
Long QT syndrome 1
Short QT syndrome type 2
Atrial fibrillation, familial, 3
Beckwith-Wiedemann syndrome
Jervell and Lange-Nielsen syndrome 1
Criteria Provided
Multiple Submitters
No Conflicts
CA008316 rs_199472726

6 SubmittersRCV000046134RCV000057767RCV000523854RCV002415500RCV002490608

NM_000218.3(KCNQ1):c.914G>A (p.Trp305Ter) SNV
Germline
Chr11:2572979 Pathogenic Long QT syndrome
Condition: not provided
Cardiovascular phenotype
Atrial fibrillation, familial, 3
Beckwith-Wiedemann syndrome
Short QT syndrome type 2
Long QT syndrome 1
Jervell and Lange-Nielsen syndrome 1
Congenital long QT syndrome
Cardiac arrhythmia
Criteria Provided
Multiple Submitters
No Conflicts
CA008615 rs_120074186

9 SubmittersRCV000046150RCV000254708RCV000619717RCV002496704RCV000826193RCV001841658

NM_000218.3(KCNQ1):c.921+1G>T SNV
Germline
Chr11:2572987 Pathogenic/Likely pathogenic Condition: not provided
Cardiovascular phenotype
Long QT syndrome
Atrial fibrillation, familial, 3
Beckwith-Wiedemann syndrome
Jervell and Lange-Nielsen syndrome 1
Short QT syndrome type 2
Long QT syndrome 1
Criteria Provided
Multiple Submitters
No Conflicts
CA008659 rs_397508130

5 SubmittersRCV000182134RCV002444508RCV001377884RCV002496705

NM_000218.3(KCNQ1):c.1355G>A (p.Arg452Gln) SNV
Germline
Chr11:2588816 Conflicting classifications of pathogenicity Long QT syndrome
Condition: not provided
Atrial fibrillation, familial, 3
Beckwith-Wiedemann syndrome
Jervell and Lange-Nielsen syndrome 1
Short QT syndrome type 2
Long QT syndrome 1
Cardiac arrhythmia
Atrial fibrillation, familial, 3
Short QT syndrome type 2
Long QT syndrome 1
Congenital long QT syndrome
Cardiovascular phenotype
Familial atrial fibrillation
Jervell and Lange-Nielsen syndrome
Short QT syndrome
not specified
Criteria Provided
Conflicting Classifications
CA005679 rs_145229963

10 SubmittersRCV000297971RCV000057583RCV000764975RCV001841666RCV003448257RCV000284895RCV000246256RCV000337547RCV000355198RCV000398200RCV001255594

NM_000218.3(KCNQ1):c.1553G>A (p.Arg518Gln) SNV
Germline
Chr11:2768882 Conflicting classifications of pathogenicity Long QT syndrome
Congenital long QT syndrome
Condition: not provided
not specified
Cardiac arrhythmia
Cardiovascular phenotype
Short QT syndrome type 2
Long QT syndrome 1
Beckwith-Wiedemann syndrome
Atrial fibrillation, familial, 3
Jervell and Lange-Nielsen syndrome 1
Criteria Provided
Conflicting Classifications
CA005903 rs_145974930

10 SubmittersRCV000148557RCV000057593RCV000505803RCV001824592RCV001841668RCV003162436RCV002483092

NM_000218.3(KCNQ1):c.1861G>A (p.Gly621Ser) SNV
Germline
Chr11:2847833 Conflicting classifications of pathogenicity Condition: not provided
Long QT syndrome
Atrial fibrillation, familial, 3
Beckwith-Wiedemann syndrome
Jervell and Lange-Nielsen syndrome 1
Short QT syndrome type 2
Long QT syndrome 1
Cardiac arrhythmia
Cardiovascular phenotype
not specified
Criteria Provided
Conflicting Classifications
CA006526 rs_199472820

8 SubmittersRCV000057646RCV000471820RCV000763730RCV001841679RCV003372614RCV000484989

NM_000218.3(KCNQ1):c.583C>T (p.Arg195Trp) SNV
Germline
Chr11:2570733 Conflicting classifications of pathogenicity Congenital long QT syndrome
Long QT syndrome
Cardiac arrhythmia
Long QT syndrome 1
Atrial fibrillation, familial, 3
Short QT syndrome type 2
Beckwith-Wiedemann syndrome
Jervell and Lange-Nielsen syndrome 1
Cardiovascular phenotype
Atrial fibrillation
not specified
Criteria Provided
Conflicting Classifications
CA007637 rs_150172393

9 SubmittersRCV000057713RCV000148554RCV001841687RCV002483094RCV003162439RCV004772836RCV003993784

NM_022455.5(NSD1):c.7576C>T (p.Pro2526Ser) SNV
Germline
Chr5:177294944 Conflicting classifications of pathogenicity Condition: not provided
Beckwith-Wiedemann syndrome
Sotos syndrome
not specified
Inborn genetic diseases
Sotos syndrome
Criteria Provided
Conflicting Classifications
CA223709 rs_373932824

9 SubmittersRCV000082142RCV000515435RCV001172456RCV002390242RCV003231150

NM_001122630.2(CDKN1C):c.176C>T (p.Pro59Leu) SNV
Germline
Chr11:2885281 Pathogenic/Likely pathogenic Condition: not provided
Beckwith-Wiedemann syndrome
Criteria Provided
Multiple Submitters
No Conflicts
CA216367420 rs_483352970

3 SubmittersRCV001269845RCV003502515

NM_001122630.2(CDKN1C):c.655C>T (p.Gln219Ter) SNV
Germline
Chr11:2884802 Pathogenic Beckwith-Wiedemann syndrome Criteria Provided
Multiple Submitters
No Conflicts
CA216367211 rs_483352988

2 SubmittersRCV001218456

NM_001122630.2(CDKN1C):c.688C>T (p.Gln230Ter) SNV
Germline
Chr11:2884769 Pathogenic Beckwith-Wiedemann syndrome Criteria Provided
Multiple Submitters
No Conflicts
CA216367184 rs_483352991

2 SubmittersRCV002514595

NM_001122630.2(CDKN1C):c.698C>A (p.Ser233Ter) SNV
Germline
Chr11:2884759 Pathogenic Beckwith-Wiedemann syndrome
Condition: not provided
Criteria Provided
Multiple Submitters
No Conflicts
CA216367178 rs_483352993

2 SubmittersRCV003502516RCV004696850

NM_001122630.2(CDKN1C):c.*5+2T>C SNV
Unknown
Chr11:2883997 Pathogenic Beckwith-Wiedemann syndrome No Assertion Criteria Provided
CA274859 rs_587777866

1 SubmittersRCV000172924

NM_022455.5(NSD1):c.6014G>A (p.Arg2005Gln) SNV
Germline
Chr5:177283791 Pathogenic/Likely pathogenic Beckwith-Wiedemann syndrome
Condition: not provided
Sotos syndrome
Criteria Provided
Multiple Submitters
No Conflicts
CA295024 rs_587784174

5 SubmittersRCV000793328RCV000286929RCV003231294

NM_001122630.2(CDKN1C):c.803G>T (p.Arg268Leu) SNV
Germline
Chr11:2884119 Pathogenic Silver-Russell syndrome 1
Beckwith-Wiedemann syndrome
IMAGe syndrome
Criteria Provided
Single Submitter
CA274888 rs_318240750

3 SubmittersRCV000172991RCV002516573RCV004816250

NM_001122630.2(CDKN1C):c.579G>A (p.Pro193=) SNV
Germline
Chr11:2884878 Conflicting classifications of pathogenicity Condition: not provided
CDKN1C-related disorder
Beckwith-Wiedemann syndrome
Criteria Provided
Conflicting Classifications
CA238549 rs_794726872

5 SubmittersRCV000173058RCV003975253RCV001087134

NM_000218.3(KCNQ1):c.1128+5G>A SNV
Germline
Chr11:2585312 Conflicting classifications of pathogenicity Condition: not provided
Beckwith-Wiedemann syndrome
Jervell and Lange-Nielsen syndrome 1
Short QT syndrome type 2
Atrial fibrillation, familial, 3
Long QT syndrome 1
Long QT syndrome
Cardiac arrhythmia
Hearing impairment
Cardiovascular phenotype
Criteria Provided
Conflicting Classifications
CA005367 rs_76735093

9 SubmittersRCV000182177RCV000764973RCV001087240RCV001842869RCV001375390RCV003165390

NM_000218.3(KCNQ1):c.1336G>A (p.Asp446Asn) SNV
Germline
Chr11:2588797 Conflicting classifications of pathogenicity Condition: not provided
Cardiac arrhythmia
Beckwith-Wiedemann syndrome
Jervell and Lange-Nielsen syndrome 1
Short QT syndrome type 2
Atrial fibrillation, familial, 3
Long QT syndrome 1
Long QT syndrome
Cardiovascular phenotype
Criteria Provided
Conflicting Classifications
CA005599 rs_149089817

6 SubmittersRCV000182184RCV001842871RCV002485201RCV001852305RCV002381589

NM_001122630.2(CDKN1C):c.661C>T (p.Gln221Ter) SNV
Germline
Chr11:2884796 Pathogenic Beckwith-Wiedemann syndrome
CDKN1C-related disorder
Criteria Provided
Multiple Submitters
No Conflicts
CA277051 rs_797045445

2 SubmittersRCV000192927RCV003401049

NM_022455.5(NSD1):c.2350C>T (p.Gln784Ter) SNV
Germline
Chr5:177210749 Likely pathogenic Sotos syndrome
Beckwith-Wiedemann syndrome
Criteria Provided
Single Submitter
CA319766 rs_374740802

1 SubmittersRCV000195430

NM_001130823.3(DNMT1):c.406C>T (p.Arg136Cys) SNV
Germline
Chr19:10180389 Conflicting classifications of pathogenicity Hereditary sensory neuropathy-deafness-dementia syndrome
Beckwith-Wiedemann syndrome
Condition: not provided
Inborn genetic diseases
Criteria Provided
Conflicting Classifications
CA9188763 rs_138841970

6 SubmittersRCV000549690RCV000625705RCV000996738RCV002321845

NM_001122630.2(CDKN1C):c.423G>A (p.Pro141=) SNV
Germline
Chr11:2885034 Conflicting classifications of pathogenicity Beckwith-Wiedemann syndrome
Condition: not provided
CDKN1C-related disorder
Criteria Provided
Conflicting Classifications
CA10582907 rs_878853626

4 SubmittersRCV000225887RCV003326378RCV003967610

NM_001122630.2(CDKN1C):c.411G>A (p.Pro137=) SNV
Germline
Chr11:2885046 Conflicting classifications of pathogenicity Condition: not provided
Beckwith-Wiedemann syndrome
Criteria Provided
Conflicting Classifications
CA10582908 rs_878853625

3 SubmittersRCV000595152RCV001083881

NM_001122630.2(CDKN1C):c.39A>G (p.Leu13=) SNV
Germline
Chr11:2885418 Conflicting classifications of pathogenicity not specified
Beckwith-Wiedemann syndrome
Criteria Provided
Conflicting Classifications
CA5822248 rs_3852522

3 SubmittersRCV003150988RCV000231240

NM_001122630.2(CDKN1C):c.-11+61G>A SNV
Germline
Chr11:2885573 Conflicting classifications of pathogenicity Beckwith-Wiedemann syndrome
Condition: not provided
IMAGe syndrome
Criteria Provided
Conflicting Classifications
CA10582910 rs_188494894

5 SubmittersRCV000232251RCV000514664RCV004816437

NM_001122630.2(CDKN1C):c.-132G>A SNV
Germline
Chr11:2885755 Conflicting classifications of pathogenicity Beckwith-Wiedemann syndrome
IMAGe syndrome
Beckwith-Wiedemann syndrome
Condition: not provided
Criteria Provided
Conflicting Classifications
CA10582911 rs_147317732

5 SubmittersRCV000229473RCV000763733RCV001582760

NM_001122630.2(CDKN1C):c.-10-5C>T SNV
Germline
Chr11:2885471 Conflicting classifications of pathogenicity Beckwith-Wiedemann syndrome
Inborn genetic diseases
CDKN1C-related disorder
IMAGe syndrome
Beckwith-Wiedemann syndrome
Criteria Provided
Conflicting Classifications
CA5822251 rs_374634184

5 SubmittersRCV000469288RCV004975514RCV004722759RCV005044657

NM_001122630.2(CDKN1C):c.853C>T (p.Pro285Ser) SNV
Germline
Chr11:2884069 Conflicting classifications of pathogenicity Beckwith-Wiedemann syndrome
Beckwith-Wiedemann syndrome
IMAGe syndrome
Inborn genetic diseases
IMAGe syndrome
Criteria Provided
Conflicting Classifications
CA5822145 rs_531059713

5 SubmittersRCV000471520RCV002506091RCV002523285RCV004816675

NM_001130823.3(DNMT1):c.3668G>A (p.Arg1223His) SNV
Germline
Chr19:10140184 Conflicting classifications of pathogenicity Hereditary sensory neuropathy-deafness-dementia syndrome
Beckwith-Wiedemann syndrome
Condition: not provided
Inborn genetic diseases
Criteria Provided
Conflicting Classifications
CA9187695 rs_757460628

5 SubmittersRCV000813215RCV000625706RCV002225636RCV002460080

NM_022455.5(NSD1):c.6089A>C (p.Gln2030Pro) SNV
Germline
Chr5:177283866 Likely pathogenic Beckwith-Wiedemann syndrome Criteria Provided
Single Submitter
CA362316494 rs_1554204952

1 SubmittersRCV000543532

NM_022455.5(NSD1):c.1816A>T (p.Lys606Ter) SNV
Germline
Chr5:177210215 Pathogenic Beckwith-Wiedemann syndrome Criteria Provided
Single Submitter
CA362311511 rs_1554189131

1 SubmittersRCV000558545

NM_001122630.2(CDKN1C):c.597C>G (p.Pro199=) SNV
Germline
Chr11:2884860 Conflicting classifications of pathogenicity Beckwith-Wiedemann syndrome
Condition: not provided
Criteria Provided
Conflicting Classifications
CA5822206 rs_767656648

4 SubmittersRCV000529614RCV003144310

NM_000218.3(KCNQ1):c.644T>G (p.Val215Gly) SNV
Germline
Chr11:2571364 Conflicting classifications of pathogenicity Long QT syndrome
Jervell and Lange-Nielsen syndrome 1
Atrial fibrillation, familial, 3
Beckwith-Wiedemann syndrome
Short QT syndrome type 2
Long QT syndrome 1
Cardiovascular phenotype
Criteria Provided
Conflicting Classifications
CA039326 rs_368011737

3 SubmittersRCV000559784RCV000764972RCV004023761

NM_001122630.2(CDKN1C):c.855C>T (p.Pro285=) SNV
Germline
Chr11:2884067 Conflicting classifications of pathogenicity Beckwith-Wiedemann syndrome
Condition: not provided
Criteria Provided
Conflicting Classifications
CA5822144 rs_779172459

2 SubmittersRCV000544653RCV003884594

NM_001122630.2(CDKN1C):c.736G>T (p.Ala246Ser) SNV
Germline
Chr11:2884721 Conflicting classifications of pathogenicity Beckwith-Wiedemann syndrome
Beckwith-Wiedemann syndrome
IMAGe syndrome
Inborn genetic diseases
Condition: not provided
Criteria Provided
Conflicting Classifications
CA5822178 rs_754283907

5 SubmittersRCV000535977RCV002481743RCV002527659RCV004691834

NM_001122630.2(CDKN1C):c.669C>G (p.Gly223=) SNV
Germline
Chr11:2884788 Conflicting classifications of pathogenicity Condition: not provided
Beckwith-Wiedemann syndrome
Inborn genetic diseases
Criteria Provided
Conflicting Classifications
CA5822187 rs_546016935

4 SubmittersRCV000728470RCV001083671RCV005318417

NM_001122630.2(CDKN1C):c.551T>C (p.Val184Ala) SNV
Germline
Chr11:2884906 Conflicting classifications of pathogenicity Beckwith-Wiedemann syndrome
Condition: not provided
Beckwith-Wiedemann syndrome
IMAGe syndrome
Inborn genetic diseases
Criteria Provided
Conflicting Classifications
CA379146404 rs_1261515352

4 SubmittersRCV000539515RCV000735112RCV002506285RCV004975615

NM_001122630.2(CDKN1C):c.553G>C (p.Ala185Pro) SNV
Germline
Chr11:2884904 Conflicting classifications of pathogenicity Beckwith-Wiedemann syndrome
Beckwith-Wiedemann syndrome
IMAGe syndrome
Inborn genetic diseases
Criteria Provided
Conflicting Classifications
CA379146399 rs_1281835164

3 SubmittersRCV000628534RCV002492931RCV005532704

NM_001122630.2(CDKN1C):c.319C>G (p.Pro107Ala) SNV
Germline
Chr11:2885138 Conflicting classifications of pathogenicity Beckwith-Wiedemann syndrome
Condition: not provided
IMAGe syndrome
Beckwith-Wiedemann syndrome
CDKN1C-related disorder
Criteria Provided
Conflicting Classifications
CA5822213 rs_772684721

5 SubmittersRCV000628546RCV001771845RCV002483764RCV003935740

NM_001122630.2(CDKN1C):c.45C>T (p.Arg15=) SNV
Germline
Chr11:2885412 Conflicting classifications of pathogenicity Beckwith-Wiedemann syndrome
Condition: not provided
CDKN1C-related disorder
Criteria Provided
Conflicting Classifications
CA472483597 rs_1360965916

3 SubmittersRCV000628590RCV003992352RCV003392464

NM_022455.5(NSD1):c.207C>A (p.Tyr69Ter) SNV
Germline
Chr5:177135310 Pathogenic Beckwith-Wiedemann syndrome
Condition: not provided
Criteria Provided
Single Submitter
CA362291622 rs_1562097849

1 SubmittersRCV000697110RCV005092022

NM_001122630.2(CDKN1C):c.673G>T (p.Glu225Ter) SNV
Germline
Chr11:2884784 Pathogenic Beckwith-Wiedemann syndrome Criteria Provided
Single Submitter
CA379145783 rs_1564929426

1 SubmittersRCV000695961

NM_001122630.2(CDKN1C):c.640G>T (p.Glu214Ter) SNV
Germline
Chr11:2884817 Pathogenic Beckwith-Wiedemann syndrome
Condition: not provided
Criteria Provided
Multiple Submitters
No Conflicts
CA379145963 rs_1564929520

2 SubmittersRCV000693066RCV005431881

NM_001122630.2(CDKN1C):c.577C>G (p.Pro193Ala) SNV
Germline
Chr11:2884880 Conflicting classifications of pathogenicity Beckwith-Wiedemann syndrome
Inborn genetic diseases
Condition: not provided
CDKN1C-related disorder
Criteria Provided
Conflicting Classifications
CA379146324 rs_1345683292

4 SubmittersRCV000704183RCV003165902RCV005243344RCV003892565

NM_001122630.2(CDKN1C):c.465G>A (p.Ala155=) SNV
Germline
Chr11:2884992 Conflicting classifications of pathogenicity Beckwith-Wiedemann syndrome
Beckwith-Wiedemann syndrome
IMAGe syndrome
Criteria Provided
Conflicting Classifications
CA472832865 rs_1361624164

2 SubmittersRCV000694131RCV002485671

NM_001122630.2(CDKN1C):c.719C>T (p.Ala240Val) SNV
Germline
Chr11:2884738 Conflicting classifications of pathogenicity Beckwith-Wiedemann syndrome
IMAGe syndrome
Beckwith-Wiedemann syndrome
Inborn genetic diseases
Condition: not provided
Criteria Provided
Conflicting Classifications
CA5822180 rs_765542916

5 SubmittersRCV000697477RCV002485701RCV002533489RCV004692149

NM_001122630.2(CDKN1C):c.852T>C (p.Cys284=) SNV
Germline
Chr11:2884070 Conflicting classifications of pathogenicity Condition: not provided
Beckwith-Wiedemann syndrome
Criteria Provided
Conflicting Classifications
CA379144889 rs_1564928644

2 SubmittersRCV000734685RCV003117537

NM_022455.5(NSD1):c.6366T>G (p.Phe2122Leu) SNV
Germline
Chr5:177292061 Likely pathogenic Beckwith-Wiedemann syndrome
Sotos syndrome
Criteria Provided
Multiple Submitters
No Conflicts
CA362320595 rs_1562305653

2 SubmittersRCV001053071RCV003232087

NM_000218.3(KCNQ1):c.1109C>T (p.Ala370Val) SNV
Germline
Chr11:2585288 Conflicting classifications of pathogenicity Long QT syndrome
Condition: not provided
Cardiac arrhythmia
Cardiovascular phenotype
Atrial fibrillation, familial, 3
Beckwith-Wiedemann syndrome
Jervell and Lange-Nielsen syndrome 1
Short QT syndrome type 2
Long QT syndrome 1
Atrial fibrillation
Criteria Provided
Conflicting Classifications
CA027096 rs_775362401

7 SubmittersRCV001203576RCV001574714RCV001841958RCV002440609RCV002501006RCV004773133

NM_022455.5(NSD1):c.5410T>A (p.Tyr1804Asn) SNV
Germline
Chr5:177269708 Likely pathogenic Beckwith-Wiedemann syndrome Criteria Provided
Single Submitter
CA362306968 rs_1581497686

1 SubmittersRCV000799306

NM_001122630.2(CDKN1C):c.453G>A (p.Pro151=) SNV
Germline
Chr11:2885004 Conflicting classifications of pathogenicity Beckwith-Wiedemann syndrome
Beckwith-Wiedemann syndrome
IMAGe syndrome
Criteria Provided
Conflicting Classifications
CA472832915 rs_1262607893

2 SubmittersRCV000818053RCV002487811

NM_001122630.2(CDKN1C):c.497T>C (p.Val166Ala) SNV
Germline
Chr11:2884960 Conflicting classifications of pathogenicity Beckwith-Wiedemann syndrome
Inborn genetic diseases
Criteria Provided
Conflicting Classifications
CA379146519 rs_1288020047

2 SubmittersRCV000892446RCV003243366

NM_001127598.3(IGF2):c.97C>T (p.Gln33Ter) SNV
Germline
Chr11:2140200 Conflicting classifications of pathogenicity Condition: not provided
Inborn genetic diseases
Beckwith-Wiedemann syndrome
Wilms tumor 1
Silver-Russell syndrome 3
Silver-Russell syndrome 1
Criteria Provided
Conflicting Classifications
CA5817794 rs_200441006

4 SubmittersRCV000882263RCV002539309RCV005392504

NM_001122630.2(CDKN1C):c.355G>T (p.Glu119Ter) SNV
Germline
Chr11:2885102 Pathogenic Beckwith-Wiedemann syndrome Criteria Provided
Single Submitter
CA379146800 rs_1564930265

1 SubmittersRCV001054384

NM_001122630.2(CDKN1C):c.92T>C (p.Leu31Pro) SNV
Germline
Chr11:2885365 Pathogenic Beckwith-Wiedemann syndrome Criteria Provided
Single Submitter
CA379147681 rs_1848977725

1 SubmittersRCV001059990

NM_001122630.2(CDKN1C):c.100G>A (p.Glu34Lys) SNV
Germline
Chr11:2885357 Conflicting classifications of pathogenicity Beckwith-Wiedemann syndrome
Condition: not provided
Criteria Provided
Conflicting Classifications
CA379147657 rs_1848977184

3 SubmittersRCV001090131RCV001760063

NM_000218.3(KCNQ1):c.1456G>A (p.Ala486Thr) SNV
Germline
Chr11:2662023 Conflicting classifications of pathogenicity Condition: not provided
Cardiac arrhythmia
Atrial fibrillation, familial, 3
Beckwith-Wiedemann syndrome
Jervell and Lange-Nielsen syndrome 1
Long QT syndrome 1
Short QT syndrome type 2
Long QT syndrome
Cardiovascular phenotype
KCNQ1-related disorder
Criteria Provided
Conflicting Classifications
CA029975 rs_753256800

8 SubmittersRCV001751341RCV001841033RCV002480624RCV002560015RCV004619539RCV004733172

NM_000218.3(KCNQ1):c.1765G>A (p.Gly589Ser) SNV
Germline
Chr11:2778008 Conflicting classifications of pathogenicity Long QT syndrome
Condition: not provided
Cardiac arrhythmia
Atrial fibrillation, familial, 3
Long QT syndrome 1
Beckwith-Wiedemann syndrome
Short QT syndrome type 2
Jervell and Lange-Nielsen syndrome 1
Cardiovascular phenotype
not specified
Criteria Provided
Conflicting Classifications
CA032686 rs_780676796

8 SubmittersRCV001233933RCV002224008RCV001843217RCV002484008RCV004033334RCV003317443

NM_000218.3(KCNQ1):c.1936G>A (p.Gly646Ser) SNV
Germline
Chr11:2847908 Conflicting classifications of pathogenicity Long QT syndrome
Cardiac arrhythmia
Cardiovascular phenotype
Atrial fibrillation, familial, 3
Beckwith-Wiedemann syndrome
Jervell and Lange-Nielsen syndrome 1
Long QT syndrome 1
Short QT syndrome type 2
Criteria Provided
Conflicting Classifications
CA033794 rs_763478809

5 SubmittersRCV001228890RCV001841126RCV002411719RCV002484042

NM_001122630.2(CDKN1C):c.85G>T (p.Glu29Ter) SNV
Germline
Chr11:2885372 Pathogenic Beckwith-Wiedemann syndrome Criteria Provided
Single Submitter
CA379147707 rs_1564930723

1 SubmittersRCV001219770

NM_001122630.2(CDKN1C):c.885G>A (p.Ser295=) SNV
Germline
Chr11:2884037 Conflicting classifications of pathogenicity Beckwith-Wiedemann syndrome
Beckwith-Wiedemann syndrome
IMAGe syndrome
Criteria Provided
Conflicting Classifications
CA379144747 rs_1060503861

2 SubmittersRCV001203100RCV002484092

NM_022455.5(NSD1):c.4766-1G>A SNV
Germline
Chr5:177256950 Likely pathogenic Beckwith-Wiedemann syndrome Criteria Provided
Single Submitter
CA362354686 rs_1756517678

1 SubmittersRCV001226039

NM_000612.6(IGF2):c.100G>T (p.Gly34Cys) SNV
Germline
Chr11:2135424 Likely pathogenic Silver-Russell syndrome 3
Silver-Russell syndrome 3
Wilms tumor 1
Beckwith-Wiedemann syndrome
Silver-Russell syndrome 1
Criteria Provided
Multiple Submitters
No Conflicts
CA379113899 rs_1858937359

2 SubmittersRCV001253240RCV002491857

NM_001122630.2(CDKN1C):c.325G>T (p.Glu109Ter) SNV
Germline
Chr11:2885132 Pathogenic Beckwith-Wiedemann syndrome Criteria Provided
Single Submitter
CA379146865 rs_1220263188

1 SubmittersRCV001383932

NM_001122630.2(CDKN1C):c.203G>A (p.Trp68Ter) SNV
Germline
Chr11:2885254 Pathogenic Beckwith-Wiedemann syndrome Criteria Provided
Single Submitter
CA379147291 rs_1379762772

1 SubmittersRCV001385216

NM_001122630.2(CDKN1C):c.199C>T (p.Gln67Ter) SNV
Germline
Chr11:2885258 Pathogenic Beckwith-Wiedemann syndrome Criteria Provided
Single Submitter
CA379147309 rs_2133785734

1 SubmittersRCV001382544

NM_001122630.2(CDKN1C):c.57C>A (p.Cys19Ter) SNV
Germline
Chr11:2885400 Pathogenic/Likely pathogenic Beckwith-Wiedemann syndrome Criteria Provided
Multiple Submitters
No Conflicts
CA379147815 rs_759365577

2 SubmittersRCV001920474

NM_001122630.2(CDKN1C):c.244G>T (p.Glu82Ter) SNV
Germline
Chr11:2885213 Pathogenic Beckwith-Wiedemann syndrome Criteria Provided
Single Submitter
CA379147115 rs_2133785530

1 SubmittersRCV001935054

NM_001122630.2(CDKN1C):c.204G>A (p.Trp68Ter) SNV
Germline
Chr11:2885253 Pathogenic Beckwith-Wiedemann syndrome Criteria Provided
Single Submitter
CA379147284 rs_2133785693

1 SubmittersRCV001903089

NM_001122630.2(CDKN1C):c.133G>T (p.Glu45Ter) SNV
Germline
Chr11:2885324 Pathogenic Beckwith-Wiedemann syndrome Criteria Provided
Single Submitter
CA379147543 rs_1848974871

1 SubmittersRCV001939641

NM_001122630.2(CDKN1C):c.*5+20G>T SNV
Germline
Chr11:2883979 Conflicting classifications of pathogenicity Beckwith-Wiedemann syndrome
IMAGe syndrome
Beckwith-Wiedemann syndrome
Criteria Provided
Conflicting Classifications
CA5822129 rs_760540648

3 SubmittersRCV002257066RCV002481065

NM_000612.6(IGF2):c.439G>C (p.Glu147Gln) SNV
Germline
Chr11:2133091 Conflicting classifications of pathogenicity Condition: not provided
Silver-Russell syndrome 1
Wilms tumor 1
Beckwith-Wiedemann syndrome
Silver-Russell syndrome 3
Inborn genetic diseases
Criteria Provided
Conflicting Classifications
CA5817613 rs_150866176

3 SubmittersRCV002591496RCV005399124RCV004985214

NM_001122630.2(CDKN1C):c.163C>T (p.Gln55Ter) SNV
Germline
Chr11:2885294 Pathogenic Beckwith-Wiedemann syndrome Criteria Provided
Single Submitter
CA379147434 rs_2494389957

1 SubmittersRCV002653279

NM_001122630.2(CDKN1C):c.100G>T (p.Glu34Ter) SNV
Germline
Chr11:2885357 Pathogenic Beckwith-Wiedemann syndrome Criteria Provided
Single Submitter
CA379147654 rs_1848977184

1 SubmittersRCV002867481

NM_001122630.2(CDKN1C):c.224C>A (p.Ser75Ter) SNV
Germline
Chr11:2885233 Pathogenic Beckwith-Wiedemann syndrome Criteria Provided
Single Submitter
CA379147195 rs_897964106

1 SubmittersRCV003030956

NM_001122630.2(CDKN1C):c.820G>T (p.Glu274Ter) SNV
Germline
Chr11:2884102 Pathogenic Beckwith-Wiedemann syndrome Criteria Provided
Single Submitter
CA379145029 rs_2494380076

1 SubmittersRCV003613475

NM_001122630.2(CDKN1C):c.166C>T (p.Gln56Ter) SNV
Germline
Chr11:2885291 Likely pathogenic IMAGe syndrome
Beckwith-Wiedemann syndrome
Criteria Provided
Single Submitter

1 SubmittersRCV004795552

NM_001122630.2(CDKN1C):c.68T>C (p.Phe23Ser) SNV
Germline
Chr11:2885389 Likely pathogenic Beckwith-Wiedemann syndrome Criteria Provided
Single Submitter

1 SubmittersRCV005116625

NM_001122630.2(CDKN1C):c.799A>T (p.Lys267Ter) SNV
Germline
Chr11:2884123 Pathogenic Beckwith-Wiedemann syndrome Criteria Provided
Single Submitter

1 SubmittersRCV005140303