Total 35 pathogenic variants reported for Bartter syndrome 
Variant Name Variant Type Variant Genomic Location Clinical Significance Phenotype Condition Review Status ClinGen Allele dbSNP ID Variation/condition record
NM_000085.5(CLCNKB):c.1830G>A (p.Trp610Ter) SNV
Germline		 Chr1:16055508 Pathogenic Bartter syndrome, type 3, with hypocalciuria
Condition: not provided
Bartter disease type 3
Bartter disease type 4B		 Criteria Provided
Multiple Submitters
No Conflicts
 CA118917 rs_121909136

4 SubmittersRCV000008037RCV000413605RCV001536025
NM_000085.5(CLCNKB):c.230-1G>C SNV
Germline		 Chr1:16046534 Pathogenic Bartter syndrome, type 3, with hypocalciuria No Assertion Criteria Provided
 rs_554794449

1 SubmittersRCV000008038
NM_000085.5(CLCNKB):c.1929+1G>A SNV
Germline		 Chr1:16055759 Pathogenic BARTTER SYNDROME, TYPE 4B, WITH SENSORINEURAL DEAFNESS No Assertion Criteria Provided
 rs_1191726071

1 SubmittersRCV000008039
NM_000388.4(CASR):c.2528C>A (p.Ala843Glu) SNV
Germline		 Chr3:122284482 Likely pathogenic Bartter syndrome with hypocalcemia
Autosomal dominant hypocalcemia 1		 Criteria Provided
Single Submitter
 CA119519 rs_104893706

2 SubmittersRCV000008847RCV000054480
NM_000388.4(CASR):c.374T>C (p.Leu125Pro) SNV
Germline		 Chr3:122257269 Conflicting classifications of pathogenicity Autosomal dominant hypocalcemia 1
Bartter syndrome with hypocalcemia
Epilepsy, idiopathic generalized, susceptibility to, 8
Neonatal severe primary hyperparathyroidism
Familial hypocalciuric hypercalcemia 1
Autosomal dominant hypocalcemia 1
Condition: not provided
Familial hypocalciuric hypercalcemia
Autosomal dominant hypocalcemia 1		 Criteria Provided
Conflicting Classifications
 CA119525 rs_104893708

5 SubmittersRCV000008851RCV000190877RCV002482843RCV001781207RCV003764538
NM_001126108.2(SLC12A3):c.1964G>A (p.Arg655His) SNV
Germline		 Chr16:56886402 Pathogenic/Likely pathogenic Familial hypokalemia-hypomagnesemia
Condition: not provided
Familial hypokalemia-hypomagnesemia
Bartter syndrome		 Criteria Provided
Multiple Submitters
No Conflicts
 CA119770 rs_121909380

12 SubmittersRCV000009119RCV000518052RCV001328221
NM_000338.3(SLC12A1):c.1942G>A (p.Asp648Asn) SNV
Germline		 Chr15:48251770 Conflicting classifications of pathogenicity Bartter disease type 1
Bartter syndrome
Familial hypokalemia-hypomagnesemia		 No Assertion Criteria Provided
 CA119888 rs_137853157

2 SubmittersRCV000009295RCV001328098
NM_153766.3(KCNJ1):c.535G>A (p.Ala179Thr) SNV
Germline		 Chr11:128839709 Likely pathogenic Bartter disease type 2
Condition: not provided
Bartter syndrome
Primary congenital glaucoma		 Criteria Provided
Multiple Submitters
No Conflicts
 CA120158 rs_104894253

3 SubmittersRCV000009729RCV003555992RCV004579516RCV004526591
NM_000388.4(CASR):c.85A>G (p.Lys29Glu) SNV
Germline		 Chr3:122254274 Pathogenic Bartter syndrome with hypocalcemia No Assertion Criteria Provided
 CA144613 rs_397514729

1 SubmittersRCV000054483
NM_001126108.2(SLC12A3):c.2221G>A (p.Gly741Arg) SNV
Germline		 Chr16:56887967 Pathogenic/Likely pathogenic Familial hypokalemia-hypomagnesemia
Condition: not provided
Familial hypokalemia-hypomagnesemia
Bartter syndrome
Hypokalemia
Hypermagnesemia
Myalgia
Muscle weakness
Inherited renal tubular disease
SLC12A3-related disorder		 Criteria Provided
Multiple Submitters
No Conflicts
 CA204579 rs_138977195

23 SubmittersRCV000190624RCV000255367RCV001328096RCV000626663RCV004017477RCV003401040
NM_000338.3(SLC12A1):c.905G>A (p.Arg302Gln) SNV
Germline		 Chr15:48230433 Conflicting classifications of pathogenicity Condition: not provided
Bartter disease type 1
Bartter syndrome		 Criteria Provided
Conflicting Classifications
 CA7546932 rs_747229048

4 SubmittersRCV000348606RCV002248509RCV002509348
NM_001126108.2(SLC12A3):c.2863C>T (p.Arg955Trp) SNV
Germline		 Chr16:56904401 Conflicting classifications of pathogenicity Familial hypokalemia-hypomagnesemia
Familial hypokalemia-hypomagnesemia
Bartter syndrome
Condition: not provided		 Criteria Provided
Conflicting Classifications
 CA8070131 rs_559626481

5 SubmittersRCV000341379RCV001328102RCV001389305
NM_001126108.2(SLC12A3):c.2856+1G>T SNV
Germline		 Chr16:56902509 Pathogenic/Likely pathogenic Condition: not provided
Familial hypokalemia-hypomagnesemia
Bartter syndrome
Familial hypokalemia-hypomagnesemia		 Criteria Provided
Multiple Submitters
No Conflicts
 CA8070077 rs_199974259

16 SubmittersRCV000412851RCV001271445RCV001328169
NM_001126108.2(SLC12A3):c.1928C>T (p.Pro643Leu) SNV
Germline		 Chr16:56886366 Pathogenic/Likely pathogenic Familial hypokalemia-hypomagnesemia
Condition: not provided
Familial hypokalemia-hypomagnesemia
Bartter syndrome
Inborn genetic diseases		 Criteria Provided
Multiple Submitters
No Conflicts
 CA8069667 rs_140012781

16 SubmittersRCV000477915RCV000681948RCV001328101RCV004023099
NM_001126108.2(SLC12A3):c.506-1G>A SNV
Germline		 Chr16:56869728 Pathogenic Condition: not provided
Familial hypokalemia-hypomagnesemia
Bartter syndrome
Familial hypokalemia-hypomagnesemia
SLC12A3-related disorder		 Criteria Provided
Multiple Submitters
No Conflicts
 CA8069085 rs_201555148

9 SubmittersRCV000517374RCV000762971RCV001328170RCV003925548
NM_001126108.2(SLC12A3):c.1315G>A (p.Gly439Ser) SNV
Germline		 Chr16:56879207 Pathogenic Condition: not provided
Familial hypokalemia-hypomagnesemia
Familial hypokalemia-hypomagnesemia
Bartter syndrome
Familial aortopathy
Inborn genetic diseases		 Criteria Provided
Multiple Submitters
No Conflicts
 rs_759377924

16 SubmittersRCV000713326RCV000760979RCV001328223RCV004544962RCV004026826
NM_001126108.2(SLC12A3):c.2938G>A (p.Gly980Arg) SNV
Germline		 Chr16:56913277 Pathogenic/Likely pathogenic Condition: not provided
Familial hypokalemia-hypomagnesemia
Bartter syndrome
Familial hypokalemia-hypomagnesemia
Inborn genetic diseases		 Criteria Provided
Multiple Submitters
No Conflicts
 rs_34803727

12 SubmittersRCV000713331RCV000762975RCV001328220RCV004026827
NM_153766.3(KCNJ1):c.155C>T (p.Thr52Met) SNV
Germline		 Chr11:128840089 Conflicting classifications of pathogenicity Bartter disease type 2
Condition: not provided
Bartter syndrome		 Criteria Provided
Conflicting Classifications
 rs_373367600

3 SubmittersRCV000778314RCV001856155RCV003226388
NM_001126108.2(SLC12A3):c.1314C>G (p.Tyr438Ter) SNV
Germline		 Chr16:56879206 Pathogenic Condition: not provided
Familial hypokalemia-hypomagnesemia
Bartter syndrome		 Criteria Provided
Single Submitter
 rs_776210036

2 SubmittersRCV001035507RCV001328171
NM_001126108.2(SLC12A3):c.3025C>T (p.Arg1009Ter) SNV
Germline		 Chr16:56913364 Pathogenic Condition: not provided
Familial hypokalemia-hypomagnesemia
Familial hypokalemia-hypomagnesemia
Bartter syndrome		 Criteria Provided
Multiple Submitters
No Conflicts
 rs_781209989

5 SubmittersRCV001036419RCV001813809RCV001328173
NM_153766.3(KCNJ1):c.601C>T (p.Leu201Phe) SNV
Germline		 Chr11:128839643 Conflicting classifications of pathogenicity Condition: not provided
Bartter disease type 2
Bartter syndrome		 Criteria Provided
Conflicting Classifications
 rs_200320892

12 SubmittersRCV001092303RCV001251500RCV002282455
NM_001126108.2(SLC12A3):c.1636A>G (p.Ser546Gly) SNV
Germline		 Chr16:56882464 Pathogenic Bartter syndrome
Familial hypokalemia-hypomagnesemia
Condition: not provided		 Criteria Provided
Single Submitter
 rs_1451284628

2 SubmittersRCV001328166RCV001880185
NM_000388.4(CASR):c.209G>A (p.Trp70Ter) SNV
Germline		 Chr3:122257104 Pathogenic Neonatal severe primary hyperparathyroidism
Familial hypocalciuric hypercalcemia
Autosomal dominant hypocalcemia 1
Bartter syndrome with hypocalcemia
Familial hypocalciuric hypercalcemia
Autosomal dominant hypocalcemia 1
Familial hypocalciuric hypercalcemia		 Criteria Provided
Multiple Submitters
No Conflicts
 rs_2107627458

3 SubmittersRCV001535770RCV001873792RCV003399331
NM_153766.3(KCNJ1):c.887T>G (p.Val296Gly) SNV
Germline		 Chr11:128839357 Pathogenic Bartter syndrome
Condition: not provided		 Criteria Provided
Multiple Submitters
No Conflicts
 rs_753949204

2 SubmittersRCV002240079RCV003560878
NM_000338.3(SLC12A1):c.1685-2A>G SNV
Germline		 Chr15:48249573 Conflicting classifications of pathogenicity Bartter syndrome
Inborn genetic diseases
Condition: not provided		 Criteria Provided
Conflicting Classifications

3 SubmittersRCV002282821RCV003289497RCV003698899
NM_153766.3(KCNJ1):c.874C>T (p.Arg292Trp) SNV
Germline		 Chr11:128839370 Pathogenic Bartter syndrome
Condition: not provided		 Criteria Provided
Multiple Submitters
No Conflicts

2 SubmittersRCV002469957RCV003561053
NM_000338.3(SLC12A1):c.421-1G>A SNV
Germline		 Chr15:48220633 Likely pathogenic Bartter syndrome Criteria Provided
Single Submitter

1 SubmittersRCV002469972
NM_000338.3(SLC12A1):c.2741G>A (p.Trp914Ter) SNV
Germline		 Chr15:48288154 Pathogenic/Likely pathogenic Bartter syndrome
Condition: not provided		 Criteria Provided
Multiple Submitters
No Conflicts

2 SubmittersRCV002510404RCV003689021
NM_000338.3(SLC12A1):c.975+1G>A SNV
Germline		 Chr15:48230504 Likely pathogenic Condition: not provided
Bartter disease type 1
Bartter syndrome		 Criteria Provided
Multiple Submitters
No Conflicts

3 SubmittersRCV002635503RCV003340526RCV003994449
NM_000085.5(CLCNKB):c.1313G>A (p.Arg438His) SNV
Germline		 Chr1:16051725 Pathogenic Condition: not provided
Bartter syndrome		 Criteria Provided
Multiple Submitters
No Conflicts

3 SubmittersRCV002938123RCV003317629
NM_153766.3(KCNJ1):c.472G>A (p.Ala158Thr) SNV
Germline		 Chr11:128839772 Likely pathogenic Bartter syndrome Criteria Provided
Single Submitter

1 SubmittersRCV003236387