Total 248 pathogenic variants reported for Autoimmune lymphoproliferative syndrome
| Variant Name |
Variant Type |
Variant Genomic Location |
Clinical Significance |
Phenotype Condition |
Review Status |
ClinGen Allele |
dbSNP ID |
Variation/condition record |
|
NM_001372051.1(CASP8):c.742C>T (p.Arg248Trp)
|
SNV Germline |
Chr2:201276908 |
Likely pathogenic |
Autoimmune lymphoproliferative syndrome type 2B |
Criteria Provided Single Submitter |
CA119046 |
rs_17860424 |
2 SubmittersRCV000008201 |
|
NM_004985.5(KRAS):c.38G>A (p.Gly13Asp)
|
SNV Germline/somatic |
Chr12:25245347 |
Pathogenic |
Breast adenocarcinoma Non-small cell lung carcinoma Juvenile myelomonocytic leukemia Autoimmune lymphoproliferative syndrome type 4 OCULOECTODERMAL SYNDROME, SOMATIC Condition: not provided Inborn genetic diseases Nevus sebaceous Noonan syndrome and Noonan-related syndrome Encephalocraniocutaneous lipomatosis RASopathy Neoplasm KRAS-related disorder Familial pancreatic carcinoma |
Criteria Provided Multiple Submitters No Conflicts |
CA122534 |
rs_112445441 |
15 SubmittersRCV000013409RCV000038269RCV000144967RCV000144968RCV000791297RCV001092389RCV001266168RCV001526657RCV001813183RCV001839444RCV001857340RCV004668723RCV004549358RCV004813034 |
|
NM_004985.5(KRAS):c.35G>A (p.Gly12Asp)
|
SNV Germline/somatic |
Chr12:25245350 |
Pathogenic/Likely pathogenic |
Carcinoma of pancreas Epidermal nevus Nevus sebaceous Linear nevus sebaceous syndrome Juvenile myelomonocytic leukemia Autoimmune lymphoproliferative syndrome type 4 Non-small cell lung carcinoma Ovarian neoplasm Condition: not provided Acute myeloid leukemia RASopathy Cerebral arteriovenous malformation Vascular Tumors Including Pyogenic Granuloma Primary low grade serous adenocarcinoma of ovary Capillary malformation-arteriovenous malformation 1 Encephalocraniocutaneous lipomatosis Gastric cancer Endometrial hyperplasia without atypia Atypical endometrial hyperplasia Congenital Pulmonary Airway Malformations Neoplasm Cardiovascular phenotype 12 conditions KRAS-related overgrowth |
Criteria Provided Multiple Submitters No Conflicts |
CA122538 |
rs_121913529 |
25 SubmittersRCV000013411RCV000022799RCV000029214RCV000029215RCV000144969RCV000144970RCV000150896RCV000150897RCV000272938RCV000433573RCV000548006RCV000585796RCV000662266RCV000856666RCV001799604RCV001839445RCV002508117RCV003327361RCV004554600RCV004668724RCV004018620RCV005007840RCV005251035 |
|
NM_004985.5(KRAS):c.101C>G (p.Pro34Arg)
|
SNV Germline |
Chr12:25245284 |
Pathogenic/Likely pathogenic |
Cardiofaciocutaneous syndrome 2 Condition: not provided Noonan syndrome Cardio-facio-cutaneous syndrome Autoimmune lymphoproliferative syndrome type 4 Acute myeloid leukemia Noonan syndrome 3 Cardiofaciocutaneous syndrome 2 RASopathy Noonan syndrome 3 |
Criteria Provided Multiple Submitters No Conflicts |
CA280040 |
rs_104894366 |
7 SubmittersRCV000043674RCV000207495RCV000211723RCV000850569RCV001851825RCV005252679 |
|
NM_002524.5(NRAS):c.38G>A (p.Gly13Asp)
|
SNV Germline/somatic |
Chr1:114716123 |
Pathogenic/Likely pathogenic |
Juvenile myelomonocytic leukemia Noonan syndrome 6 Autoimmune lymphoproliferative syndrome type 4 Condition: not provided Acute megakaryoblastic leukemia in down syndrome RASopathy Neoplasm |
Criteria Provided Multiple Submitters No Conflicts |
CA123620 |
rs_121434596 |
8 SubmittersRCV000014915RCV000022690RCV000144962RCV000157672RCV001293767RCV005089258RCV005229792 |
|
NM_000043.6(FAS):c.721A>C (p.Thr241Pro)
|
SNV Germline |
Chr10:89014163 |
Pathogenic |
AUTOIMMUNE LYMPHOPROLIFERATIVE SYNDROME, TYPE IA |
No Assertion Criteria Provided |
CA126567 |
rs_121913076 |
1 SubmittersRCV000017963 |
|
NM_000043.6(FAS):c.569-2A>C
|
SNV Germline |
Chr10:89011997 |
Pathogenic |
AUTOIMMUNE LYMPHOPROLIFERATIVE SYNDROME, TYPE IA |
No Assertion Criteria Provided |
CA212969 |
rs_606231363 |
1 SubmittersRCV000017964 |
|
NM_000043.6(FAS):c.817C>T (p.Gln273Ter)
|
SNV Germline |
Chr10:89014259 |
Pathogenic |
AUTOIMMUNE LYMPHOPROLIFERATIVE SYNDROME, TYPE IA Autoimmune lymphoproliferative syndrome type 1 |
Criteria Provided Single Submitter |
CA126570 |
rs_121913077 |
2 SubmittersRCV000017965RCV001071386 |
|
NM_000043.6(FAS):c.779A>T (p.Asp260Val)
|
SNV Germline |
Chr10:89014221 |
Pathogenic |
AUTOIMMUNE LYMPHOPROLIFERATIVE SYNDROME, TYPE IA Autoimmune lymphoproliferative syndrome type 1 |
Criteria Provided Single Submitter |
CA126581 |
rs_28929498 |
2 SubmittersRCV000017968RCV002513090 |
|
NM_000043.6(FAS):c.749G>C (p.Arg250Pro)
|
SNV Germline |
Chr10:89014191 |
Pathogenic |
AUTOIMMUNE LYMPHOPROLIFERATIVE SYNDROME, TYPE IA Autoimmune lymphoproliferative syndrome type 1 Condition: not provided |
Criteria Provided Single Submitter |
CA126583 |
rs_121913080 |
4 SubmittersRCV000017969RCV000638906RCV001701481 |
|
NM_000043.6(FAS):c.651+2T>A
|
SNV Germline |
Chr10:89012083 |
Pathogenic |
AUTOIMMUNE LYMPHOPROLIFERATIVE SYNDROME, TYPE IA |
No Assertion Criteria Provided |
CA212970 |
rs_267607122 |
1 SubmittersRCV000017971 |
|
NM_000043.6(FAS):c.73G>A (p.Ala25Thr)
|
SNV Germline |
Chr10:89003071 |
Pathogenic |
AUTOIMMUNE LYMPHOPROLIFERATIVE SYNDROME, TYPE IA |
No Assertion Criteria Provided |
CA212971 |
rs_606231364 |
1 SubmittersRCV000017972 |
|
NM_000043.6(FAS):c.740G>C (p.Gly247Ala)
|
SNV Germline |
Chr10:89014182 |
Pathogenic |
AUTOIMMUNE LYMPHOPROLIFERATIVE SYNDROME, TYPE IA |
No Assertion Criteria Provided |
CA126602 |
rs_121913085 |
1 SubmittersRCV000017977 |
|
NM_000043.6(FAS):c.651+2T>C
|
SNV Germline |
Chr10:89012083 |
Pathogenic |
AUTOIMMUNE LYMPHOPROLIFERATIVE SYNDROME, TYPE IA Autoimmune lymphoproliferative syndrome type 1 |
Criteria Provided Multiple Submitters No Conflicts |
CA126606 |
rs_267607122 |
3 SubmittersRCV000017978RCV001382233 |
|
NM_000043.6(FAS):c.778G>T (p.Asp260Tyr)
|
SNV Germline |
Chr10:89014220 |
Pathogenic |
AUTOIMMUNE LYMPHOPROLIFERATIVE SYNDROME, TYPE IA |
No Assertion Criteria Provided |
CA126607 |
rs_121913086 |
1 SubmittersRCV000017980 |
|
NM_002524.5(NRAS):c.35G>A (p.Gly12Asp)
|
SNV Germline/somatic |
Chr1:114716126 |
Pathogenic/Likely pathogenic |
Juvenile myelomonocytic leukemia Epidermal nevus Condition: not provided NRAS-related disorder Cardiovascular phenotype RASopathy Noonan syndrome 6 Noonan syndrome and Noonan-related syndrome Colorectal cancer Autoimmune lymphoproliferative syndrome type 4 |
Criteria Provided Multiple Submitters No Conflicts |
CA130425 |
rs_121913237 |
14 SubmittersRCV000144963RCV000032849RCV000158980RCV003415756RCV004018703RCV001852659RCV001781333RCV001813214RCV005603591RCV003221788 |
|
NM_033360.4(KRAS):c.355G>A (p.Asp119Asn)
|
SNV Germline |
Chr12:25225709 |
Likely pathogenic |
Noonan syndrome 3 KRAS-related RASopathy Acute myeloid leukemia Noonan syndrome 3 Autoimmune lymphoproliferative syndrome type 4 Cardiofaciocutaneous syndrome 2 Condition: not provided |
Criteria Provided Multiple Submitters No Conflicts |
CA296084 |
rs_730880471 |
4 SubmittersRCV000999628RCV001269478RCV000850568RCV000157937 |
|
NM_004985.5(KRAS):c.37G>T (p.Gly13Cys)
|
SNV Germline/somatic |
Chr12:25245348 |
Pathogenic/Likely pathogenic |
Non-small cell lung carcinoma Autoimmune lymphoproliferative syndrome type 4 Condition: not provided KRAS-related disorder |
Criteria Provided Multiple Submitters No Conflicts |
CA135570 |
rs_121913535 |
8 SubmittersRCV000038268RCV000144972RCV000681039RCV003335071 |
|
NM_000238.4(KCNH2):c.1714G>A (p.Gly572Ser)
|
SNV Germline |
Chr7:150951679 |
Pathogenic |
Congenital long QT syndrome Condition: not provided Long QT syndrome Cardiovascular phenotype Long QT syndrome 2 Autoimmune lymphoproliferative syndrome due to CTLA4 haploinsufficiency |
Criteria Provided Multiple Submitters No Conflicts |
CA005241 |
rs_9333649 |
10 SubmittersRCV000057959RCV000181811RCV000631548RCV000619615RCV000678923RCV004813051 |
|
NM_006254.4(PRKCD):c.1352+1G>A
|
SNV Germline |
Chr3:53186696 |
Pathogenic |
Autoimmune lymphoproliferative syndrome, type III caused by mutation in PRKCD |
Criteria Provided Single Submitter |
CA145457 |
rs_398122958 |
2 SubmittersRCV000074607 |
|
NM_000043.6(FAS):c.580G>A (p.Glu194Lys)
|
SNV Germline |
Chr10:89012010 |
Conflicting classifications of pathogenicity |
not specified Condition: not provided Autoimmune lymphoproliferative syndrome type 1 FAS-related disorder |
Criteria Provided Conflicting Classifications |
CA159637 |
rs_56006128 |
15 SubmittersRCV000121048RCV000766928RCV000407819RCV003935155 |
|
NM_006254.4(PRKCD):c.1528G>A (p.Gly510Ser)
|
SNV Germline |
Chr3:53188832 |
Pathogenic |
Autoimmune lymphoproliferative syndrome, type III caused by mutation in PRKCD |
No Assertion Criteria Provided |
CA171032 |
rs_606231296 |
1 SubmittersRCV000144965 |
|
NM_006254.4(PRKCD):c.1840C>T (p.Arg614Trp)
|
SNV Germline |
Chr3:53189969 |
Conflicting classifications of pathogenicity |
Autoimmune lymphoproliferative syndrome, type III caused by mutation in PRKCD Condition: not provided |
Criteria Provided Conflicting Classifications |
CA171034 |
rs_606231297 |
3 SubmittersRCV000144966RCV003105796 |
|
NM_005214.5(CTLA4):c.151C>T (p.Arg51Ter)
|
SNV Germline |
Chr2:203870627 |
Pathogenic |
Autoimmune lymphoproliferative syndrome due to CTLA4 haploinsufficiency Condition: not provided Type 1 diabetes mellitus 12 Celiac disease, susceptibility to, 3 Hashimoto thyroiditis Systemic lupus erythematosus Autoimmune lymphoproliferative syndrome due to CTLA4 haploinsufficiency Inborn genetic diseases |
Criteria Provided Multiple Submitters No Conflicts |
CA173992 |
rs_606231417 |
7 SubmittersRCV000148290RCV000788671RCV005016468RCV002515995 |
|
NM_005214.5(CTLA4):c.567+5G>C
|
SNV Germline |
Chr2:203871492 |
Pathogenic |
Autoimmune lymphoproliferative syndrome due to CTLA4 haploinsufficiency |
No Assertion Criteria Provided |
CA173995 |
rs_606231419 |
1 SubmittersRCV000148292 |
|
NM_005214.5(CTLA4):c.105C>A (p.Cys35Ter)
|
SNV Germline |
Chr2:203868047 |
Pathogenic |
Autoimmune lymphoproliferative syndrome due to CTLA4 haploinsufficiency |
No Assertion Criteria Provided |
CA173996 |
rs_606231420 |
1 SubmittersRCV000148293 |
|
NM_005214.5(CTLA4):c.109+1G>T
|
SNV Germline |
Chr2:203868052 |
Likely pathogenic |
Autoimmune lymphoproliferative syndrome due to CTLA4 haploinsufficiency |
Criteria Provided Single Submitter |
CA173998 |
rs_606231421 |
2 SubmittersRCV000148294 |
|
NM_005214.5(CTLA4):c.208C>T (p.Arg70Trp)
|
SNV Germline |
Chr2:203870684 |
Pathogenic/Likely pathogenic |
Autoimmune lymphoproliferative syndrome due to CTLA4 haploinsufficiency Condition: not provided |
Criteria Provided Multiple Submitters No Conflicts |
CA173999 |
rs_606231422 |
6 SubmittersRCV000148295RCV001311981 |
|
NM_006254.4(PRKCD):c.1448G>A (p.Arg483Gln)
|
SNV Germline |
Chr3:53188752 |
Conflicting classifications of pathogenicity |
not specified Autoimmune lymphoproliferative syndrome, type III caused by mutation in PRKCD Inborn genetic diseases |
Criteria Provided Conflicting Classifications |
CA10585980 |
rs_879255393 |
3 SubmittersRCV000239035RCV001857837RCV003165675 |
|
NM_005214.5(CTLA4):c.60G>A (p.Trp20Ter)
|
SNV Germline |
Chr2:203868002 |
Pathogenic/Likely pathogenic |
Condition: not provided Autoimmune lymphoproliferative syndrome due to CTLA4 haploinsufficiency |
Criteria Provided Multiple Submitters No Conflicts |
CA10602845 |
rs_886041906 |
2 SubmittersRCV000274542RCV004725136 |
|
NM_000639.3(FASLG):c.451+7A>G
|
SNV Germline |
Chr1:172664397 |
Conflicting classifications of pathogenicity |
Autoimmune lymphoproliferative syndrome type 1 Lung cancer Autoimmune lymphoproliferative syndrome type 1 |
Criteria Provided Conflicting Classifications |
CA1247568 |
rs_201525996 |
3 SubmittersRCV000275976RCV001281011 |
|
NM_000639.3(FASLG):c.364C>A (p.His122Asn)
|
SNV Germline |
Chr1:172660110 |
Conflicting classifications of pathogenicity |
not specified Autoimmune lymphoproliferative syndrome type 1 FASLG-related disorder |
Criteria Provided Conflicting Classifications |
CA1247528 |
rs_140406512 |
4 SubmittersRCV004021376RCV000329844RCV004755851 |
|
NM_000639.3(FASLG):c.176C>T (p.Pro59Leu)
|
SNV Germline |
Chr1:172659377 |
Conflicting classifications of pathogenicity |
Autoimmune lymphoproliferative syndrome type 1 not specified |
Criteria Provided Conflicting Classifications |
CA1247469 |
rs_375737004 |
3 SubmittersRCV000260218RCV004021375 |
|
NM_000639.3(FASLG):c.280T>G (p.Leu94Val)
|
SNV Germline |
Chr1:172659481 |
Conflicting classifications of pathogenicity |
Condition: not provided Autoimmune lymphoproliferative syndrome type 1 |
Criteria Provided Conflicting Classifications |
CA1247495 |
rs_56302117 |
4 SubmittersRCV001764258RCV000275447 |
|
NM_000639.3(FASLG):c.278C>T (p.Ala93Val)
|
SNV Germline |
Chr1:172659479 |
Conflicting classifications of pathogenicity |
Autoimmune lymphoproliferative syndrome type 1 AUTOIMMUNE LYMPHOPROLIFERATIVE SYNDROME, TYPE IB not specified |
Criteria Provided Conflicting Classifications |
CA1247494 |
rs_758796005 |
4 SubmittersRCV000356098RCV005429013RCV004619252 |
|
NM_032977.4(CASP10):c.49A>G (p.Lys17Glu)
|
SNV Germline |
Chr2:201185826 |
Conflicting classifications of pathogenicity |
Autoimmune lymphoproliferative syndrome type 2A |
Criteria Provided Conflicting Classifications |
CA2052766 |
rs_552561721 |
2 SubmittersRCV000288669 |
|
NM_032977.4(CASP10):c.534A>G (p.Val178=)
|
SNV Germline |
Chr2:201193076 |
Conflicting classifications of pathogenicity |
Autoimmune lymphoproliferative syndrome type 2A Condition: not provided |
Criteria Provided Conflicting Classifications |
CA2052896 |
rs_146233833 |
3 SubmittersRCV000338431RCV004808691 |
|
NM_032977.4(CASP10):c.1216A>T (p.Ile406Leu)
|
SNV Germline |
Chr2:201209363 |
Conflicting classifications of pathogenicity |
Autoimmune lymphoproliferative syndrome type 2A Condition: not provided Hypomyelination and Congenital Cataract |
Criteria Provided Conflicting Classifications |
CA2053200 |
rs_80358239 |
7 SubmittersRCV000378446RCV000440171RCV001258256 |
|
NM_032977.4(CASP10):c.1466G>A (p.Arg489Gln)
|
SNV Germline |
Chr2:201217638 |
Conflicting classifications of pathogenicity |
Autoimmune lymphoproliferative syndrome type 2A not specified |
Criteria Provided Conflicting Classifications |
CA2053279 |
rs_535121774 |
3 SubmittersRCV000315298RCV003151033 |
|
NM_001372051.1(CASP8):c.1304+12C>T
|
SNV Germline |
Chr2:201285329 |
Conflicting classifications of pathogenicity |
Autoimmune lymphoproliferative syndrome type 2B |
Criteria Provided Conflicting Classifications |
CA2053775 |
rs_375465590 |
2 SubmittersRCV000360030 |
|
NM_032977.4(CASP10):c.1502C>T (p.Pro501Leu)
|
SNV Germline |
Chr2:201217674 |
Conflicting classifications of pathogenicity |
Autoimmune lymphoproliferative syndrome type 2A not specified |
Criteria Provided Conflicting Classifications |
CA2053282 |
rs_148939095 |
4 SubmittersRCV000351475RCV000481210 |
|
NM_001372051.1(CASP8):c.1038T>C (p.Pro346=)
|
SNV Germline |
Chr2:201285051 |
Conflicting classifications of pathogenicity |
Autoimmune lymphoproliferative syndrome type 2B |
Criteria Provided Conflicting Classifications |
CA2053741 |
rs_768360449 |
2 SubmittersRCV000302893 |
|
NM_032977.4(CASP10):c.729A>G (p.Arg243=)
|
SNV Germline |
Chr2:201205889 |
Conflicting classifications of pathogenicity |
Autoimmune lymphoproliferative syndrome type 1 Autoimmune lymphoproliferative syndrome type 2A |
Criteria Provided Conflicting Classifications |
CA2053034 |
rs_374515060 |
2 SubmittersRCV000272486RCV002057636 |
|
NM_032977.4(CASP10):c.879C>A (p.Ser293Arg)
|
SNV Germline |
Chr2:201208140 |
Conflicting classifications of pathogenicity |
Autoimmune lymphoproliferative syndrome type 2A not specified |
Criteria Provided Conflicting Classifications |
CA2053088 |
rs_369897442 |
3 SubmittersRCV000327608RCV004021789 |
|
NM_001372051.1(CASP8):c.1308C>T (p.Gly436=)
|
SNV Germline |
Chr2:201286462 |
Conflicting classifications of pathogenicity |
Autoimmune lymphoproliferative syndrome type 2B |
Criteria Provided Conflicting Classifications |
CA2053801 |
rs_777463099 |
2 SubmittersRCV000268336 |
|
NM_032977.4(CASP10):c.20A>G (p.His7Arg)
|
SNV Germline |
Chr2:201185797 |
Conflicting classifications of pathogenicity |
Autoimmune lymphoproliferative syndrome type 2A not specified |
Criteria Provided Conflicting Classifications |
CA2052764 |
rs_200935960 |
3 SubmittersRCV000387671RCV004021788 |
|
NM_001372051.1(CASP8):c.843C>A (p.Ile281=)
|
SNV Germline |
Chr2:201284856 |
Conflicting classifications of pathogenicity |
Autoimmune lymphoproliferative syndrome type 2B |
Criteria Provided Conflicting Classifications |
CA2053710 |
rs_199934929 |
2 SubmittersRCV000392973 |
|
NM_000043.6(FAS):c.867A>C (p.Glu289Asp)
|
SNV Germline |
Chr10:89014309 |
Conflicting classifications of pathogenicity |
Autoimmune lymphoproliferative syndrome type 1 Inborn genetic diseases |
Criteria Provided Conflicting Classifications |
CA5593228 |
rs_377337130 |
3 SubmittersRCV000337266RCV003343765 |
|
NM_000043.6(FAS):c.432C>T (p.Asp144=)
|
SNV Germline |
Chr10:89008986 |
Conflicting classifications of pathogenicity |
Autoimmune lymphoproliferative syndrome type 1 |
Criteria Provided Conflicting Classifications |
CA5593105 |
rs_574338716 |
2 SubmittersRCV000381167 |
|
NM_033360.4(KRAS):c.436G>C (p.Ala146Pro)
|
SNV Germline/somatic |
Chr12:25225628 |
Pathogenic/Likely pathogenic |
Multiple myeloma Autoimmune lymphoproliferative syndrome type 4 RASopathy |
Criteria Provided Multiple Submitters No Conflicts |
CA16602441 |
rs_121913527 |
3 SubmittersRCV000984134RCV002259922RCV001861474 |
|
NM_005214.5(CTLA4):c.118G>A (p.Val40Met)
|
SNV Germline |
Chr2:203870594 |
Conflicting classifications of pathogenicity |
Autoimmune lymphoproliferative syndrome due to CTLA4 haploinsufficiency Condition: not provided Celiac disease, susceptibility to, 3 Hashimoto thyroiditis Systemic lupus erythematosus Type 1 diabetes mellitus 12 Autoimmune lymphoproliferative syndrome due to CTLA4 haploinsufficiency Inborn genetic diseases |
Criteria Provided Conflicting Classifications |
CA350138101 |
rs_1553657378 |
7 SubmittersRCV000604644RCV000788529RCV005018832RCV005549976 |
|
NM_005214.5(CTLA4):c.160G>A (p.Ala54Thr)
|
SNV Germline |
Chr2:203870636 |
Conflicting classifications of pathogenicity |
Autoimmune lymphoproliferative syndrome due to CTLA4 haploinsufficiency |
Criteria Provided Conflicting Classifications |
CA350138187 |
rs_1553657387 |
2 SubmittersRCV000615288 |
|
NM_005214.5(CTLA4):c.410C>T (p.Pro137Leu)
|
SNV Germline |
Chr2:203870886 |
Pathogenic/Likely pathogenic |
Condition: not provided Autoimmune lymphoproliferative syndrome due to CTLA4 haploinsufficiency Type 1 diabetes mellitus 12 Celiac disease, susceptibility to, 3 Autoimmune lymphoproliferative syndrome due to CTLA4 haploinsufficiency Systemic lupus erythematosus Hashimoto thyroiditis |
Criteria Provided Multiple Submitters No Conflicts |
CA350138741 |
rs_1553657429 |
5 SubmittersRCV000498929RCV000652446RCV000768197 |
|
NM_006254.4(PRKCD):c.1043A>G (p.Asn348Ser)
|
SNV Germline |
Chr3:53185984 |
Conflicting classifications of pathogenicity |
Condition: not provided Autoimmune lymphoproliferative syndrome, type III caused by mutation in PRKCD |
Criteria Provided Conflicting Classifications |
CA2452073 |
rs_33911937 |
2 SubmittersRCV000506287RCV001081059 |
|
NM_005214.5(CTLA4):c.420C>A (p.Tyr140Ter)
|
SNV Germline |
Chr2:203870896 |
Pathogenic |
Autoimmune lymphoproliferative syndrome due to CTLA4 haploinsufficiency |
Criteria Provided Single Submitter |
CA350138762 |
rs_1357409506 |
1 SubmittersRCV000529257 |
|
NM_005214.5(CTLA4):c.412C>A (p.Pro138Thr)
|
SNV Germline |
Chr2:203870888 |
Pathogenic |
Autoimmune lymphoproliferative syndrome due to CTLA4 haploinsufficiency |
Criteria Provided Single Submitter |
CA350138742 |
rs_1553657430 |
2 SubmittersRCV000585701 |
|
NM_005214.5(CTLA4):c.456T>A (p.Ile152=)
|
SNV Germline |
Chr2:203870932 |
Conflicting classifications of pathogenicity |
not specified Autoimmune lymphoproliferative syndrome due to CTLA4 haploinsufficiency |
Criteria Provided Conflicting Classifications |
CA431122326 |
rs_1242260236 |
2 SubmittersRCV000611223RCV001860288 |
|
NM_000043.6(FAS):c.578A>G (p.Lys193Arg)
|
SNV Germline |
Chr10:89012008 |
Conflicting classifications of pathogenicity |
Autoimmune lymphoproliferative syndrome type 1 Condition: not provided |
Criteria Provided Conflicting Classifications |
CA5593165 |
rs_150489856 |
7 SubmittersRCV000625369RCV000658571 |
|
NM_000043.6(FAS):c.536T>G (p.Leu179Arg)
|
SNV Germline |
Chr10:89010783 |
Likely pathogenic |
Splenomegaly Autoimmune lymphoproliferative syndrome type 1 Condition: not provided |
Criteria Provided Multiple Submitters No Conflicts |
CA377509124 |
rs_1554851718 |
3 SubmittersRCV000626571RCV001051234RCV001815421 |
|
NM_005214.5(CTLA4):c.326G>A (p.Gly109Glu)
|
SNV Germline |
Chr2:203870802 |
Conflicting classifications of pathogenicity |
Autoimmune lymphoproliferative syndrome due to CTLA4 haploinsufficiency Condition: not provided |
Criteria Provided Conflicting Classifications |
CA2067088 |
rs_144988077 |
4 SubmittersRCV000652447RCV003437383 |
|
NM_001372051.1(CASP8):c.892A>G (p.Ile298Val)
|
SNV Germline |
Chr2:201284905 |
Conflicting classifications of pathogenicity |
Autoimmune lymphoproliferative syndrome type 2B |
Criteria Provided Conflicting Classifications |
CA2053716 |
rs_146286958 |
2 SubmittersRCV000640975 |
|
NM_006254.4(PRKCD):c.788-2A>G
|
SNV Germline |
Chr3:53184872 |
Likely pathogenic |
Autoimmune lymphoproliferative syndrome, type III caused by mutation in PRKCD |
Criteria Provided Single Submitter |
CA353220286 |
rs_1295207359 |
1 SubmittersRCV000651930 |
|
NM_005214.5(CTLA4):c.410C>A (p.Pro137Gln)
|
SNV Germline |
Chr2:203870886 |
Conflicting classifications of pathogenicity |
Autoimmune lymphoproliferative syndrome due to CTLA4 haploinsufficiency Type 1 diabetes mellitus 12 Celiac disease, susceptibility to, 3 Hashimoto thyroiditis Systemic lupus erythematosus Autoimmune lymphoproliferative syndrome due to CTLA4 haploinsufficiency |
Criteria Provided Conflicting Classifications |
CA350138739 |
rs_1553657429 |
2 SubmittersRCV000695947RCV005021075 |
|
NM_000043.6(FAS):c.110T>A (p.Leu37Ter)
|
SNV Germline |
Chr10:89003108 |
Pathogenic |
Autoimmune lymphoproliferative syndrome type 1 |
Criteria Provided Single Submitter |
CA377507479 |
rs_1564686301 |
1 SubmittersRCV000704333 |
|
NM_000043.6(FAS):c.651+1G>A
|
SNV Germline |
Chr10:89012082 |
Pathogenic/Likely pathogenic |
Autoimmune lymphoproliferative syndrome type 1 |
Criteria Provided Multiple Submitters No Conflicts |
CA377509400 |
rs_1564696849 |
2 SubmittersRCV000695507 |
|
NM_000043.6(FAS):c.197-2A>G
|
SNV Germline |
Chr10:89007698 |
Likely pathogenic |
Autoimmune lymphoproliferative syndrome type 1 |
No Assertion Criteria Provided |
CA377508064 |
rs_1564691414 |
1 SubmittersRCV000735216 |
|
NM_005214.5(CTLA4):c.416A>G (p.Tyr139Cys)
|
SNV Germline |
Chr2:203870892 |
Conflicting classifications of pathogenicity |
Autoimmune lymphoproliferative syndrome due to CTLA4 haploinsufficiency Condition: not provided |
Criteria Provided Conflicting Classifications |
CA350138752 |
rs_1581573923 |
5 SubmittersRCV000850251RCV001311982 |
|
NM_006254.4(PRKCD):c.889-9C>T
|
SNV Germline |
Chr3:53185595 |
Conflicting classifications of pathogenicity |
Autoimmune lymphoproliferative syndrome, type III caused by mutation in PRKCD |
Criteria Provided Conflicting Classifications |
CA2452011 |
rs_782612523 |
2 SubmittersRCV000768295 |
|
NM_033360.4(KRAS):c.112-5C>T
|
SNV Germline |
Chr12:25227417 |
Conflicting classifications of pathogenicity |
Noonan syndrome 3 Autoimmune lymphoproliferative syndrome type 4 Acute myeloid leukemia Cardiofaciocutaneous syndrome 2 Linear nevus sebaceous syndrome RASopathy 12 conditions |
Criteria Provided Conflicting Classifications |
CA6486914 |
rs_376520586 |
2 SubmittersRCV000768256RCV002533940RCV003224447 |
|
NM_001372051.1(CASP8):c.1165C>T (p.Gln389Ter)
|
SNV Germline |
Chr2:201285178 |
Pathogenic |
Autoimmune lymphoproliferative syndrome type 2B |
Criteria Provided Single Submitter |
CA2053760 |
rs_747862347 |
1 SubmittersRCV000778584 |
|
NM_005214.5(CTLA4):c.457G>A (p.Asp153Asn)
|
SNV Germline |
Chr2:203870933 |
Conflicting classifications of pathogenicity |
Hashimoto thyroiditis Systemic lupus erythematosus Type 1 diabetes mellitus 12 Autoimmune lymphoproliferative syndrome due to CTLA4 haploinsufficiency Celiac disease, susceptibility to, 3 Condition: not provided |
Criteria Provided Conflicting Classifications |
CA350138843 |
rs_1581573970 |
2 SubmittersRCV002061137RCV000788196 |
|
NM_032977.4(CASP10):c.1321G>A (p.Ala441Thr)
|
SNV Germline |
Chr2:201209468 |
Conflicting classifications of pathogenicity |
Autoimmune lymphoproliferative syndrome type 1 Autoimmune lymphoproliferative syndrome type 2A |
Criteria Provided Conflicting Classifications |
CA2053221 |
rs_760580885 |
2 SubmittersRCV000986975RCV001796783 |
|
NM_006254.4(PRKCD):c.68C>T (p.Ala23Val)
|
SNV Germline |
Chr3:53178490 |
Conflicting classifications of pathogenicity |
Autoimmune lymphoproliferative syndrome, type III caused by mutation in PRKCD Inborn genetic diseases Condition: not provided |
Criteria Provided Conflicting Classifications |
CA2451632 |
rs_144572650 |
4 SubmittersRCV000818271RCV004028947RCV004711306 |
|
NM_006254.4(PRKCD):c.1213G>A (p.Ala405Thr)
|
SNV Germline |
Chr3:53186293 |
Conflicting classifications of pathogenicity |
Autoimmune lymphoproliferative syndrome, type III caused by mutation in PRKCD Condition: not provided |
Criteria Provided Conflicting Classifications |
CA2452113 |
rs_150331740 |
2 SubmittersRCV000803050RCV000998091 |
|
NM_006254.4(PRKCD):c.1691C>T (p.Thr564Met)
|
SNV Germline |
Chr3:53189194 |
Conflicting classifications of pathogenicity |
Autoimmune lymphoproliferative syndrome, type III caused by mutation in PRKCD Inborn genetic diseases |
Criteria Provided Conflicting Classifications |
CA2452253 |
rs_146289210 |
2 SubmittersRCV000791738RCV004027394 |
|
NM_006254.4(PRKCD):c.1705C>T (p.Arg569Cys)
|
SNV Germline |
Chr3:53189208 |
Conflicting classifications of pathogenicity |
Autoimmune lymphoproliferative syndrome, type III caused by mutation in PRKCD Condition: not provided |
Criteria Provided Conflicting Classifications |
CA2452255 |
rs_141992569 |
2 SubmittersRCV000813676RCV004768686 |
|
NM_000043.6(FAS):c.506-6C>G
|
SNV Germline |
Chr10:89010747 |
Likely pathogenic |
Autoimmune lymphoproliferative syndrome type 1 |
Criteria Provided Single Submitter |
CA915947514 |
rs_1589482683 |
1 SubmittersRCV000797871 |
|
NM_000043.6(FAS):c.651+1G>T
|
SNV Germline |
Chr10:89012082 |
Pathogenic |
Autoimmune lymphoproliferative syndrome type 1 |
Criteria Provided Single Submitter |
CA377509402 |
rs_1564696849 |
1 SubmittersRCV000805931 |
|
NM_000043.6(FAS):c.652-1G>A
|
SNV Germline |
Chr10:89013342 |
Pathogenic |
Autoimmune lymphoproliferative syndrome type 1 |
Criteria Provided Single Submitter |
CA377509409 |
rs_1589488463 |
1 SubmittersRCV000822092 |
|
NM_000043.6(FAS):c.676+1G>A
|
SNV Germline |
Chr10:89013368 |
Pathogenic |
Autoimmune lymphoproliferative syndrome type 1 |
Criteria Provided Single Submitter |
CA377509465 |
rs_1589488640 |
1 SubmittersRCV000799837 |
|
NM_032977.4(CASP10):c.81T>C (p.Ile27=)
|
SNV Germline |
Chr2:201185858 |
Conflicting classifications of pathogenicity |
Autoimmune lymphoproliferative syndrome type 2A |
Criteria Provided Conflicting Classifications |
CA63899721 |
rs_751728796 |
2 SubmittersRCV001140398 |
|
NM_006254.4(PRKCD):c.1260+7G>A
|
SNV Germline |
Chr3:53186347 |
Conflicting classifications of pathogenicity |
Autoimmune lymphoproliferative syndrome, type III caused by mutation in PRKCD |
Criteria Provided Conflicting Classifications |
CA2452119 |
rs_374605708 |
2 SubmittersRCV000912986 |
|
NM_006254.4(PRKCD):c.1447C>T (p.Arg483Trp)
|
SNV Germline |
Chr3:53188751 |
Conflicting classifications of pathogenicity |
Autoimmune lymphoproliferative syndrome, type III caused by mutation in PRKCD Condition: not provided |
Criteria Provided Conflicting Classifications |
CA2452199 |
rs_35891605 |
4 SubmittersRCV000981690RCV004808993 |
|
NM_032977.4(CASP10):c.-8+5G>A
|
SNV Germline |
Chr2:201183313 |
Conflicting classifications of pathogenicity |
Autoimmune lymphoproliferative syndrome type 1 Autoimmune lymphoproliferative syndrome type 2A |
Criteria Provided Conflicting Classifications |
CA63898235 |
rs_781551128 |
2 SubmittersRCV000986971RCV001140397 |
|
NM_000043.6(FAS):c.748C>T (p.Arg250Ter)
|
SNV Germline |
Chr10:89014190 |
Pathogenic/Likely pathogenic |
Autoimmune lymphoproliferative syndrome type 1 Inherited Immunodeficiency Diseases See cases Condition: not provided |
Criteria Provided Multiple Submitters No Conflicts |
CA377509710 |
rs_778993919 |
7 SubmittersRCV000988433RCV001027571RCV002252283RCV002275198 |
|
NM_005214.5(CTLA4):c.209G>A (p.Arg70Gln)
|
SNV Germline |
Chr2:203870685 |
Likely pathogenic |
Inherited Immunodeficiency Diseases Autoimmune lymphoproliferative syndrome due to CTLA4 haploinsufficiency Condition: not provided |
Criteria Provided Multiple Submitters No Conflicts |
CA350138293 |
rs_1581573705 |
4 SubmittersRCV001027565RCV001208574RCV004697021 |
|
NM_001372051.1(CASP8):c.775G>A (p.Asp259Asn)
|
SNV Germline |
Chr2:201276941 |
Conflicting classifications of pathogenicity |
Autoimmune lymphoproliferative syndrome type 2B Condition: not provided |
Criteria Provided Conflicting Classifications |
CA2053660 |
rs_573893736 |
2 SubmittersRCV001048674RCV001772251 |
|
NM_005214.5(CTLA4):c.349C>T (p.Gln117Ter)
|
SNV Germline |
Chr2:203870825 |
Pathogenic |
Autoimmune lymphoproliferative syndrome due to CTLA4 haploinsufficiency |
Criteria Provided Single Submitter |
CA350138601 |
rs_1688716836 |
1 SubmittersRCV001057860 |
|
NM_005214.5(CTLA4):c.436G>A (p.Gly146Arg)
|
SNV Germline |
Chr2:203870912 |
Pathogenic/Likely pathogenic |
Autoimmune lymphoproliferative syndrome due to CTLA4 haploinsufficiency Inborn genetic diseases CTLA4-related disorder |
Criteria Provided Multiple Submitters No Conflicts |
CA350138795 |
rs_1688718864 |
4 SubmittersRCV001053629RCV001266414RCV004731084 |
|
NM_000043.6(FAS):c.323A>G (p.Asp108Gly)
|
SNV Germline |
Chr10:89007826 |
Likely pathogenic |
Autoimmune lymphoproliferative syndrome type 1 |
Criteria Provided Single Submitter |
CA377508415 |
rs_1848315820 |
1 SubmittersRCV001071835 |
|
NM_000043.6(FAS):c.758G>T (p.Gly253Val)
|
SNV Germline |
Chr10:89014200 |
Pathogenic |
Autoimmune lymphoproliferative syndrome type 1 |
Criteria Provided Single Submitter |
CA377509733 |
rs_1848671126 |
1 SubmittersRCV001070775 |
|
NM_000043.6(FAS):c.776T>C (p.Ile259Thr)
|
SNV Germline |
Chr10:89014218 |
Likely pathogenic |
Autoimmune lymphoproliferative syndrome type 1 |
Criteria Provided Multiple Submitters No Conflicts |
CA377509786 |
rs_1848675068 |
2 SubmittersRCV001067019 |
|
NM_005214.5(CTLA4):c.109+1G>A
|
SNV Germline |
Chr2:203868052 |
Likely pathogenic |
Autoimmune lymphoproliferative syndrome due to CTLA4 haploinsufficiency |
Criteria Provided Single Submitter |
CA350138068 |
rs_606231421 |
1 SubmittersRCV001039297 |
|
NM_005214.5(CTLA4):c.458-1G>T
|
SNV Germline |
Chr2:203871377 |
Pathogenic |
Autoimmune lymphoproliferative syndrome due to CTLA4 haploinsufficiency |
Criteria Provided Single Submitter |
CA350138855 |
rs_1688729428 |
1 SubmittersRCV001046603 |
|
NM_000639.3(FASLG):c.360G>C (p.Gln120His)
|
SNV Germline |
Chr1:172660106 |
Conflicting classifications of pathogenicity |
Autoimmune lymphoproliferative syndrome type 1 |
Criteria Provided Conflicting Classifications |
CA1247526 |
rs_372615226 |
3 SubmittersRCV001097063 |
|
NM_000639.3(FASLG):c.452-12G>A
|
SNV Germline |
Chr1:172665610 |
Conflicting classifications of pathogenicity |
Autoimmune lymphoproliferative syndrome type 1 |
Criteria Provided Conflicting Classifications |
CA32979637 |
rs_759351686 |
2 SubmittersRCV001098808 |
|
NM_000043.6(FAS):c.84T>C (p.Thr28=)
|
SNV Germline |
Chr10:89003082 |
Conflicting classifications of pathogenicity |
Autoimmune lymphoproliferative syndrome type 1 |
Criteria Provided Conflicting Classifications |
CA470728028 |
rs_1848023281 |
2 SubmittersRCV001107073 |
|
NM_032977.4(CASP10):c.913A>G (p.Lys305Glu)
|
SNV Germline |
Chr2:201208174 |
Conflicting classifications of pathogenicity |
Autoimmune lymphoproliferative syndrome type 2A not specified |
Criteria Provided Conflicting Classifications |
CA2053093 |
rs_149912574 |
3 SubmittersRCV001140510RCV004032707 |
|
NM_032977.4(CASP10):c.442-14T>G
|
SNV Germline |
Chr2:201192970 |
Conflicting classifications of pathogenicity |
Autoimmune lymphoproliferative syndrome type 2A |
Criteria Provided Conflicting Classifications |
CA2052880 |
rs_755555484 |
2 SubmittersRCV001137518 |
|
NM_001372051.1(CASP8):c.202C>T (p.Arg68Ter)
|
SNV Germline |
Chr2:201266688 |
Pathogenic |
Autoimmune lymphoproliferative syndrome type 2B |
Criteria Provided Single Submitter |
CA2053462 |
rs_777784105 |
1 SubmittersRCV001216905 |
|
NM_005214.5(CTLA4):c.223C>T (p.Arg75Trp)
|
SNV Germline |
Chr2:203870699 |
Pathogenic |
Autoimmune lymphoproliferative syndrome due to CTLA4 haploinsufficiency |
Criteria Provided Single Submitter |
CA350138320 |
rs_1688714312 |
2 SubmittersRCV001215551 |
|
NM_006254.4(PRKCD):c.571C>T (p.Gln191Ter)
|
SNV Germline |
Chr3:53181732 |
Pathogenic |
Autoimmune lymphoproliferative syndrome, type III caused by mutation in PRKCD |
Criteria Provided Single Submitter |
CA2451828 |
rs_576747810 |
1 SubmittersRCV001231375 |
|
NM_006254.4(PRKCD):c.267G>A (p.Ser89=)
|
SNV Germline |
Chr3:53179728 |
Conflicting classifications of pathogenicity |
Autoimmune lymphoproliferative syndrome, type III caused by mutation in PRKCD Condition: not provided |
Criteria Provided Conflicting Classifications |
CA2451718 |
rs_782214291 |
2 SubmittersRCV001238980RCV004692282 |
|
NM_005214.5(CTLA4):c.458-1G>C
|
SNV Germline |
Chr2:203871377 |
Pathogenic |
Autoimmune lymphoproliferative syndrome due to CTLA4 haploinsufficiency |
Criteria Provided Single Submitter |
CA350138857 |
rs_1688729428 |
1 SubmittersRCV001239952 |
|
NM_001372051.1(CASP8):c.1303C>T (p.Arg435Ter)
|
SNV Germline |
Chr2:201285316 |
Pathogenic |
Autoimmune lymphoproliferative syndrome type 2B |
No Assertion Criteria Provided |
CA350302977 |
rs_1368296717 |
1 SubmittersRCV001267745 |
|
NM_032977.4(CASP10):c.1453G>A (p.Asp485Asn)
|
SNV Germline |
Chr2:201217625 |
Conflicting classifications of pathogenicity |
Autoimmune lymphoproliferative syndrome type 2A not specified |
Criteria Provided Conflicting Classifications |
CA2053276 |
rs_758187673 |
2 SubmittersRCV001796871RCV004036366 |
|
NM_005214.5(CTLA4):c.226C>T (p.Gln76Ter)
|
SNV Germline |
Chr2:203870702 |
Pathogenic |
Autoimmune lymphoproliferative syndrome due to CTLA4 haploinsufficiency |
Criteria Provided Multiple Submitters No Conflicts |
CA350138326 |
rs_1688714490 |
2 SubmittersRCV001331373 |
|
NM_001372051.1(CASP8):c.306-1910G>A
|
SNV Germline |
Chr2:201269606 |
Likely pathogenic |
Autoimmune lymphoproliferative syndrome type 2B |
Criteria Provided Single Submitter |
CA2053517 |
rs_373232880 |
1 SubmittersRCV001379656 |
|
NM_000043.6(FAS):c.778G>A (p.Asp260Asn)
|
SNV Germline |
Chr10:89014220 |
Pathogenic |
Autoimmune lymphoproliferative syndrome type 1 Condition: not provided |
Criteria Provided Multiple Submitters No Conflicts |
CA377509788 |
rs_121913086 |
2 SubmittersRCV001379330RCV001541758 |
|
NM_000043.6(FAS):c.442A>T (p.Lys148Ter)
|
SNV Germline |
Chr10:89008996 |
Pathogenic |
Autoimmune lymphoproliferative syndrome type 1 |
Criteria Provided Single Submitter |
CA377508879 |
rs_2133515017 |
1 SubmittersRCV001383293 |
|
NM_000043.6(FAS):c.644T>A (p.Leu215Ter)
|
SNV Germline |
Chr10:89012074 |
Pathogenic |
Autoimmune lymphoproliferative syndrome type 1 |
Criteria Provided Single Submitter |
CA377509376 |
rs_2133539468 |
1 SubmittersRCV001383519 |
|
NM_000043.6(FAS):c.676+1G>T
|
SNV Germline |
Chr10:89013368 |
Pathogenic |
Autoimmune lymphoproliferative syndrome type 1 |
Criteria Provided Single Submitter |
CA377509467 |
rs_1589488640 |
1 SubmittersRCV001382234 |
|
NM_000043.6(FAS):c.749G>A (p.Arg250Gln)
|
SNV Germline |
Chr10:89014191 |
Pathogenic/Likely pathogenic |
Autoimmune lymphoproliferative syndrome type 1 Condition: not provided |
Criteria Provided Multiple Submitters No Conflicts |
CA377509711 |
rs_121913080 |
5 SubmittersRCV001382235RCV001702895 |
|
NM_001372051.1(CASP8):c.1128G>C (p.Glu376Asp)
|
SNV Germline |
Chr2:201285141 |
Conflicting classifications of pathogenicity |
Autoimmune lymphoproliferative syndrome type 2B Inborn genetic diseases |
Criteria Provided Conflicting Classifications |
CA2053753 |
rs_549753655 |
2 SubmittersRCV001435955RCV002555535 |
|
NM_000043.6(FAS):c.20T>C (p.Leu7Pro)
|
SNV Germline |
Chr10:88990896 |
Likely pathogenic |
Condition: not provided Autoimmune lymphoproliferative syndrome type 1 |
Criteria Provided Multiple Submitters No Conflicts |
CA377505811 |
rs_2133384423 |
2 SubmittersRCV001589843RCV002573298 |
|
NM_006254.4(PRKCD):c.1384C>T (p.Gln462Ter)
|
SNV Germline |
Chr3:53187371 |
Pathogenic |
Autoimmune lymphoproliferative syndrome, type III caused by mutation in PRKCD |
No Assertion Criteria Provided |
CA353222800 |
rs_1553669486 |
1 SubmittersRCV001776308 |
|
NM_000639.3(FASLG):c.829G>A (p.Gly277Ser)
|
SNV Germline |
Chr1:172665999 |
Likely pathogenic |
Lung cancer Autoimmune lymphoproliferative syndrome type 1 |
Criteria Provided Single Submitter |
CA343806723 |
rs_1413244355 |
2 SubmittersRCV004820889RCV001789806 |
|
NM_032977.4(CASP10):c.1249C>T (p.Leu417=)
|
SNV Germline |
Chr2:201209396 |
Conflicting classifications of pathogenicity |
not specified Autoimmune lymphoproliferative syndrome type 2A |
Criteria Provided Conflicting Classifications |
CA430829611 |
rs_2126048239 |
2 SubmittersRCV001822767RCV002542688 |
|
NM_006254.4(PRKCD):c.1511G>A (p.Arg504Gln)
|
SNV Germline |
Chr3:53188815 |
Conflicting classifications of pathogenicity |
Autoimmune lymphoproliferative syndrome, type III caused by mutation in PRKCD Inborn genetic diseases |
Criteria Provided Conflicting Classifications |
CA2452206 |
rs_781836069 |
2 SubmittersRCV001987795RCV005465643 |
|
NM_000043.6(FAS):c.197-1G>A
|
SNV Germline |
Chr10:89007699 |
Likely pathogenic |
Autoimmune lymphoproliferative syndrome type 1 |
Criteria Provided Single Submitter |
CA377508068 |
rs_2133502090 |
1 SubmittersRCV001977467 |
|
NM_000043.6(FAS):c.528G>A (p.Trp176Ter)
|
SNV Germline |
Chr10:89010775 |
Pathogenic |
Autoimmune lymphoproliferative syndrome type 1 FAS-related disorder |
Criteria Provided Multiple Submitters No Conflicts |
CA211331557 |
rs_866771343 |
2 SubmittersRCV001949292RCV003401971 |
|
NM_005214.5(CTLA4):c.416A>C (p.Tyr139Ser)
|
SNV Germline |
Chr2:203870892 |
Likely pathogenic |
Autoimmune lymphoproliferative syndrome due to CTLA4 haploinsufficiency |
Criteria Provided Single Submitter |
CA350138751 |
rs_1581573923 |
1 SubmittersRCV001976036 |
|
NM_000043.6(FAS):c.334+3A>C
|
SNV Germline |
Chr10:89007840 |
Conflicting classifications of pathogenicity |
Autoimmune lymphoproliferative syndrome type 1 FAS-related disorder Condition: not provided |
Criteria Provided Conflicting Classifications |
CA930982312 |
rs_1848316496 |
3 SubmittersRCV001915772RCV003892942RCV004793590 |
|
NM_000043.6(FAS):c.332A>G (p.His111Arg)
|
SNV Germline |
Chr10:89007835 |
Pathogenic/Likely pathogenic |
Autoimmune lymphoproliferative syndrome type 1 Condition: not provided |
Criteria Provided Multiple Submitters No Conflicts |
CA377508448 |
rs_2133504109 |
2 SubmittersRCV001884965RCV004591621 |
|
NM_001372051.1(CASP8):c.879T>A (p.Tyr293Ter)
|
SNV Germline |
Chr2:201284892 |
Pathogenic |
Autoimmune lymphoproliferative syndrome type 2B |
Criteria Provided Single Submitter |
CA350299128 |
rs_1457092267 |
1 SubmittersRCV001898605 |
|
NM_005214.5(CTLA4):c.238C>T (p.Gln80Ter)
|
SNV Germline |
Chr2:203870714 |
Pathogenic |
Autoimmune lymphoproliferative syndrome due to CTLA4 haploinsufficiency |
Criteria Provided Single Submitter |
CA350138355 |
rs_1688714703 |
1 SubmittersRCV001997536 |
|
NM_000043.6(FAS):c.259G>T (p.Glu87Ter)
|
SNV Germline |
Chr10:89007762 |
Pathogenic |
Autoimmune lymphoproliferative syndrome type 1 |
Criteria Provided Single Submitter |
CA377508209 |
rs_2133503091 |
1 SubmittersRCV001993142 |
|
NM_000043.6(FAS):c.506-16A>G
|
SNV Germline |
Chr10:89010737 |
Pathogenic |
Autoimmune lymphoproliferative syndrome type 1 |
Criteria Provided Single Submitter |
CA2573145871 |
rs_2133529359 |
1 SubmittersRCV002006613 |
|
NM_006254.4(PRKCD):c.315G>A (p.Trp105Ter)
|
SNV Germline |
Chr3:53179776 |
Conflicting classifications of pathogenicity |
Autoimmune lymphoproliferative syndrome, type III caused by mutation in PRKCD Condition: not provided |
Criteria Provided Conflicting Classifications |
CA353233437 |
rs_2107257487 |
3 SubmittersRCV001939509RCV002269381 |
|
NM_006254.4(PRKCD):c.285C>A (p.Cys95Ter)
|
SNV Germline |
Chr3:53179746 |
Pathogenic |
Autoimmune lymphoproliferative syndrome, type III caused by mutation in PRKCD |
Criteria Provided Single Submitter |
CA353233364 |
rs_2107257357 |
1 SubmittersRCV001960700 |
|
NM_000639.3(FASLG):c.343C>T (p.Arg115Ter)
|
SNV Germline |
Chr1:172659544 |
Pathogenic |
Autoimmune lymphoproliferative syndrome type 1 |
Criteria Provided Single Submitter |
CA1247505 |
rs_773045347 |
1 SubmittersRCV001948225 |
|
NM_000043.6(FAS):c.505+1G>C
|
SNV Germline |
Chr10:89010601 |
Likely pathogenic |
Autoimmune lymphoproliferative syndrome type 1 |
Criteria Provided Single Submitter |
CA377509048 |
rs_2133527951 |
1 SubmittersRCV002051252 |
|
NM_001372051.1(CASP8):c.411+1G>C
|
SNV Germline |
Chr2:201271622 |
Likely pathogenic |
Autoimmune lymphoproliferative syndrome type 2B |
Criteria Provided Single Submitter |
CA350287743 |
rs_1948252170 |
1 SubmittersRCV002040866 |
|
NM_000043.6(FAS):c.789G>C (p.Lys263Asn)
|
SNV Germline |
Chr10:89014231 |
Likely pathogenic |
Autoimmune lymphoproliferative syndrome type 1 |
Criteria Provided Single Submitter |
CA377509814 |
rs_2119446096 |
1 SubmittersRCV002262183 |
|
NM_000043.6(FAS):c.334+2T>C
|
SNV Germline |
Chr10:89007839 |
Pathogenic |
Autoimmune lymphoproliferative syndrome type 1 |
Criteria Provided Single Submitter |
CA377508467 |
rs_2495102207 |
1 SubmittersRCV002464990 |
|
NM_000043.6(FAS):c.335-2A>G
|
SNV Germline |
Chr10:89008887 |
Pathogenic |
Autoimmune lymphoproliferative syndrome type 1 |
Criteria Provided Single Submitter |
CA377508506 |
rs_2495121485 |
1 SubmittersRCV003062287 |
|
NM_000043.6(FAS):c.404G>A (p.Cys135Tyr)
|
SNV Germline |
Chr10:89008958 |
Likely pathogenic |
Autoimmune lymphoproliferative syndrome type 1 |
Criteria Provided Single Submitter |
CA377508737 |
rs_1404280764 |
1 SubmittersRCV003062288 |
|
NM_000043.6(FAS):c.506-1G>C
|
SNV Germline |
Chr10:89010752 |
Pathogenic |
Autoimmune lymphoproliferative syndrome type 1 |
Criteria Provided Single Submitter |
CA377509058 |
rs_2495160136 |
1 SubmittersRCV003058262 |
|
NM_000043.6(FAS):c.651+5G>T
|
SNV Germline |
Chr10:89012086 |
Likely pathogenic |
Autoimmune lymphoproliferative syndrome type 1 |
Criteria Provided Single Submitter |
CA2580082336 |
rs_2495187032 |
1 SubmittersRCV003062289 |
|
NM_000043.6(FAS):c.779A>G (p.Asp260Gly)
|
SNV Germline |
Chr10:89014221 |
Likely pathogenic |
Autoimmune lymphoproliferative syndrome type 1 |
Criteria Provided Single Submitter |
CA377509791 |
rs_28929498 |
1 SubmittersRCV003037351 |
|
NM_000043.6(FAS):c.814G>A (p.Glu272Lys)
|
SNV Germline |
Chr10:89014256 |
Pathogenic |
Autoimmune lymphoproliferative syndrome type 1 |
Criteria Provided Single Submitter |
CA377509870 |
rs_2495226256 |
1 SubmittersRCV003037352 |
|
NM_005214.5(CTLA4):c.450T>G (p.Tyr150Ter)
|
SNV Germline |
Chr2:203870926 |
Pathogenic |
Autoimmune lymphoproliferative syndrome due to CTLA4 haploinsufficiency |
Criteria Provided Single Submitter |
CA350138829 |
rs_2469719710 |
1 SubmittersRCV003061540 |
|
NM_005214.5(CTLA4):c.494G>A (p.Trp165Ter)
|
SNV Germline |
Chr2:203871414 |
Pathogenic |
Autoimmune lymphoproliferative syndrome due to CTLA4 haploinsufficiency |
Criteria Provided Single Submitter |
CA350138939 |
rs_2469720798 |
1 SubmittersRCV003079037 |
|
NM_000043.6(FAS):c.569-1G>T
|
SNV Germline |
Chr10:89011998 |
Likely pathogenic |
Autoimmune lymphoproliferative syndrome type 1 |
Criteria Provided Single Submitter |
CA377509202 |
rs_2495184504 |
1 SubmittersRCV002863795 |
|
NM_006254.4(PRKCD):c.1743+2T>A
|
SNV Germline |
Chr3:53189248 |
Likely pathogenic |
Autoimmune lymphoproliferative syndrome, type III caused by mutation in PRKCD |
Criteria Provided Single Submitter |
CA353224221 |
rs_2471106746 |
1 SubmittersRCV002863475 |
|
NM_000043.6(FAS):c.30+2T>C
|
SNV Germline |
Chr10:88990908 |
Conflicting classifications of pathogenicity |
Autoimmune lymphoproliferative syndrome type 1 Inborn genetic diseases |
Criteria Provided Conflicting Classifications |
CA377505859 |
rs_2494797733 |
2 SubmittersRCV002885356RCV003375705 |
|
NM_001372051.1(CASP8):c.679C>T (p.Gln227Ter)
|
SNV Germline |
Chr2:201276845 |
Pathogenic |
Autoimmune lymphoproliferative syndrome type 2B |
Criteria Provided Single Submitter |
CA350293696 |
rs_143410219 |
1 SubmittersRCV002890277 |
|
NM_006254.4(PRKCD):c.788-1G>T
|
SNV Germline |
Chr3:53184873 |
Likely pathogenic |
Autoimmune lymphoproliferative syndrome, type III caused by mutation in PRKCD |
Criteria Provided Single Submitter |
CA353220292 |
rs_2471094850 |
1 SubmittersRCV002974924 |
|
NM_000043.6(FAS):c.857G>A (p.Gly286Glu)
|
SNV Germline |
Chr10:89014299 |
Pathogenic |
Autoimmune lymphoproliferative syndrome type 1 |
Criteria Provided Single Submitter |
CA377509970 |
rs_2119446879 |
1 SubmittersRCV003009179 |
|
NM_000043.6(FAS):c.140A>G (p.Gln47Arg)
|
SNV Germline |
Chr10:89003138 |
Conflicting classifications of pathogenicity |
Autoimmune lymphoproliferative syndrome type 1 Inborn genetic diseases |
Criteria Provided Conflicting Classifications |
CA5593035 |
rs_553156945 |
2 SubmittersRCV002994119RCV003170815 |
|
NM_000043.6(FAS):c.814G>C (p.Glu272Gln)
|
SNV Germline |
Chr10:89014256 |
Likely pathogenic |
Autoimmune lymphoproliferative syndrome type 1 |
Criteria Provided Single Submitter |
CA377509871 |
rs_2495226256 |
1 SubmittersRCV003011781 |
|
NM_000043.6(FAS):c.781G>A (p.Glu261Lys)
|
SNV Germline |
Chr10:89014223 |
Conflicting classifications of pathogenicity |
Condition: not provided Autoimmune lymphoproliferative syndrome type 1 |
Criteria Provided Conflicting Classifications |
CA377509794 |
rs_2495225308 |
2 SubmittersRCV004790320RCV003043703 |
|
NM_005214.5(CTLA4):c.160G>C (p.Ala54Pro)
|
SNV Germline |
Chr2:203870636 |
Pathogenic |
Autoimmune lymphoproliferative syndrome due to CTLA4 haploinsufficiency |
Criteria Provided Single Submitter |
CA350138185 |
rs_1553657387 |
1 SubmittersRCV003055780 |
|
NM_000043.6(FAS):c.676+1G>C
|
SNV Germline |
Chr10:89013368 |
Pathogenic |
Autoimmune lymphoproliferative syndrome type 1 |
Criteria Provided Single Submitter |
CA377509466 |
rs_1589488640 |
1 SubmittersRCV003047954 |
|
NM_005214.5(CTLA4):c.381C>A (p.Tyr127Ter)
|
SNV Germline |
Chr2:203870857 |
Likely pathogenic |
Autoimmune lymphoproliferative syndrome due to CTLA4 haploinsufficiency |
Criteria Provided Single Submitter |
CA350138669 |
rs_1381701157 |
1 SubmittersRCV003142406 |
|
NM_000043.6(FAS):c.115A>T (p.Lys39Ter)
|
SNV Germline |
Chr10:89003113 |
Pathogenic |
Autoimmune lymphoproliferative syndrome type 1 |
Criteria Provided Single Submitter |
CA377507498 |
rs_2495021186 |
1 SubmittersRCV003517918 |
|
NM_005214.5(CTLA4):c.415T>C (p.Tyr139His)
|
SNV Germline |
Chr2:203870891 |
Pathogenic |
Autoimmune lymphoproliferative syndrome due to CTLA4 haploinsufficiency |
Criteria Provided Single Submitter |
CA350138749 |
rs_2469719657 |
1 SubmittersRCV003586701 |
|
NM_000043.6(FAS):c.341A>T (p.Glu114Val)
|
SNV Germline |
Chr10:89008895 |
Likely pathogenic |
Autoimmune lymphoproliferative syndrome type 1 |
Criteria Provided Single Submitter |
CA377508523 |
rs_1435894576 |
1 SubmittersRCV003518769 |
|
NM_000043.6(FAS):c.538C>T (p.Leu180Phe)
|
SNV Germline |
Chr10:89010785 |
Pathogenic |
Autoimmune lymphoproliferative syndrome type 1 |
Criteria Provided Single Submitter |
CA377509129 |
rs_1848491059 |
1 SubmittersRCV003518770 |
|
NM_000043.6(FAS):c.722C>A (p.Thr241Lys)
|
SNV Germline |
Chr10:89014164 |
Pathogenic |
Autoimmune lymphoproliferative syndrome type 1 |
Criteria Provided Single Submitter |
CA5593211 |
rs_201072885 |
1 SubmittersRCV003518771 |
|
NM_000043.6(FAS):c.833T>A (p.Leu278His)
|
SNV Germline |
Chr10:89014275 |
Likely pathogenic |
Autoimmune lymphoproliferative syndrome type 1 |
Criteria Provided Single Submitter |
CA377509914 |
rs_2495227180 |
1 SubmittersRCV003517093 |
|
NM_005214.5(CTLA4):c.110-1G>A
|
SNV Germline |
Chr2:203870585 |
Likely pathogenic |
Autoimmune lymphoproliferative syndrome due to CTLA4 haploinsufficiency |
Criteria Provided Single Submitter |
CA350138078 |
rs_2469719131 |
1 SubmittersRCV003587877 |
|
NM_000043.6(FAS):c.412A>G (p.Thr138Ala)
|
SNV Germline |
Chr10:89008966 |
Conflicting classifications of pathogenicity |
Autoimmune lymphoproliferative syndrome type 1 Condition: not provided |
Criteria Provided Conflicting Classifications |
CA377508765 |
rs_1430810569 |
2 SubmittersRCV003633778RCV004763731 |
|
NM_001372051.1(CASP8):c.306-1978G>T
|
SNV Germline |
Chr2:201269538 |
Pathogenic |
Autoimmune lymphoproliferative syndrome type 2B |
Criteria Provided Single Submitter |
CA2053497 |
rs_758051022 |
1 SubmittersRCV003619487 |
|
NM_006254.4(PRKCD):c.571+1G>A
|
SNV Germline |
Chr3:53181733 |
Likely pathogenic |
Autoimmune lymphoproliferative syndrome, type III caused by mutation in PRKCD |
Criteria Provided Single Submitter |
CA353234745 |
rs_1703450134 |
1 SubmittersRCV003745147 |
|
NM_000043.6(FAS):c.713G>T (p.Gly238Val)
|
SNV Germline |
Chr10:89014155 |
Likely pathogenic |
Autoimmune lymphoproliferative syndrome type 1 |
Criteria Provided Single Submitter |
|
|
1 SubmittersRCV004596018 |
|
NM_005214.5(CTLA4):c.173G>A (p.Cys58Tyr)
|
SNV Germline |
Chr2:203870649 |
Likely pathogenic |
Autoimmune lymphoproliferative syndrome due to CTLA4 haploinsufficiency |
Criteria Provided Single Submitter |
|
|
1 SubmittersRCV004720195 |
|
NM_000043.6(FAS):c.748C>G (p.Arg250Gly)
|
SNV Germline |
Chr10:89014190 |
Likely pathogenic |
Autoimmune lymphoproliferative syndrome type 1 |
Criteria Provided Single Submitter |
|
|
1 SubmittersRCV004776504 |
|
NM_000043.6(FAS):c.381C>A (p.Cys127Ter)
|
SNV Germline |
Chr10:89008935 |
Pathogenic |
Autoimmune lymphoproliferative syndrome |
Criteria Provided Single Submitter |
|
|
1 SubmittersRCV004788455 |
|
NM_005214.5(CTLA4):c.221T>C (p.Leu74Pro)
|
SNV Germline |
Chr2:203870697 |
Likely pathogenic |
Autoimmune lymphoproliferative syndrome due to CTLA4 haploinsufficiency |
No Assertion Criteria Provided |
|
|
1 SubmittersRCV004801490 |
|
NM_006254.4(PRKCD):c.1073G>A (p.Gly358Asp)
|
SNV Germline |
Chr3:53186014 |
Likely pathogenic |
Autoimmune lymphoproliferative syndrome, type III caused by mutation in PRKCD |
Criteria Provided Single Submitter |
|
|
1 SubmittersRCV004813439 |
|
NM_005214.5(CTLA4):c.401T>G (p.Met134Arg)
|
SNV Germline |
Chr2:203870877 |
Likely pathogenic |
Autoimmune lymphoproliferative syndrome due to CTLA4 haploinsufficiency |
No Assertion Criteria Provided |
|
|
1 SubmittersRCV005012281 |
|
NM_006254.4(PRKCD):c.657+1G>A
|
SNV Germline |
Chr3:53183207 |
Likely pathogenic |
Autoimmune lymphoproliferative syndrome, type III caused by mutation in PRKCD |
Criteria Provided Single Submitter |
|
|
1 SubmittersRCV005128450 |
|
NM_001372051.1(CASP8):c.306-1G>A
|
SNV Germline |
Chr2:201271515 |
Likely pathogenic |
Autoimmune lymphoproliferative syndrome type 2B |
Criteria Provided Single Submitter |
|
|
1 SubmittersRCV005128674 |
|
NM_006254.4(PRKCD):c.1542T>G (p.Tyr514Ter)
|
SNV Germline |
Chr3:53188846 |
Pathogenic |
Autoimmune lymphoproliferative syndrome, type III caused by mutation in PRKCD |
Criteria Provided Single Submitter |
|
|
1 SubmittersRCV005125766 |
|
NM_000043.6(FAS):c.506-3C>T
|
SNV Germline |
Chr10:89010750 |
Likely pathogenic |
Autoimmune lymphoproliferative syndrome type 1 |
Criteria Provided Single Submitter |
|
|
1 SubmittersRCV005137672 |
|
NM_000043.6(FAS):c.786C>G (p.Ile262Met)
|
SNV Germline |
Chr10:89014228 |
Pathogenic |
Autoimmune lymphoproliferative syndrome type 1 |
Criteria Provided Single Submitter |
|
|
1 SubmittersRCV005154491 |
|
NM_005214.5(CTLA4):c.178T>A (p.Tyr60Asn)
|
SNV Germline |
Chr2:203870654 |
Likely pathogenic |
Autoimmune lymphoproliferative syndrome due to CTLA4 haploinsufficiency |
Criteria Provided Single Submitter |
|
|
1 SubmittersRCV005179208 |
|
NM_000043.6(FAS):c.133G>T (p.Glu45Ter)
|
SNV Germline |
Chr10:89003131 |
Pathogenic |
Autoimmune lymphoproliferative syndrome type 1 |
Criteria Provided Single Submitter |
|
|
1 SubmittersRCV005200824 |
|
NM_000043.6(FAS):c.797A>G (p.Asn266Ser)
|
SNV Germline |
Chr10:89014239 |
Likely pathogenic |
Autoimmune lymphoproliferative syndrome type 1 |
Criteria Provided Single Submitter |
|
|
1 SubmittersRCV005200825 |
|
NM_005214.5(CTLA4):c.412C>T (p.Pro138Ser)
|
SNV Germline |
Chr2:203870888 |
Likely pathogenic |
Autoimmune lymphoproliferative syndrome due to CTLA4 haploinsufficiency |
Criteria Provided Single Submitter |
|
|
1 SubmittersRCV005431085 |