GenTIGSA Gene Database on Rare Genetic Disorders

TUB like protein 1 (TULP1) Associated conditions:  1. Retinitis pigmentosa  2. Leber congenital amaurosis 
mRNA Information: Transcript Variants and Protein Isoforms
SNo. Status mRNA accession Protein accession Genomic DNA accession (Chromosome) mRNA location on genomic DNA Assembly UniProtkb ID
1 REVIEWED NM_001289395.2 NP_001276324.1 NC_000006.12 (35497873..35512895, complement) Reference GRCh38.p14 Primary Assembly -
2 REVIEWED NM_003322.6 NP_003313.3 NC_000006.12 (35497873..35512895, complement) Reference GRCh38.p14 Primary Assembly -

Transcript variants arise from alternative splicing during gene expression, producing multiple mRNA transcripts from a single gene, each encoding distinct protein isoforms.

PubMed Links for Transcript Variants (Isoforms)
Link 148 reference articles

Variant Information TUB like protein 1 (TULP1) Mutation Visualization Dashboard: Pathogenic variant distribution chart

 

IndiGenomes variants: Exploring and mapping pathogenic variants in gene TUB like protein 1 (TULP1)
ClinVar variants:Revealing mutagenic patterns

GO Term of TUB like protein 1 (TULP1)
SNo. Reported in speceis Evidence Qualifier GO term Category Pubmed Link
1Homo sapiensIEAlocated_inphotoreceptor outer segmentComponent- 
2Homo sapiensISSlocated_inphotoreceptor outer segmentComponent- 
3Homo sapiensIMPinvolved_inretina homeostasisProcess15557452 
4Homo sapiensIEAlocated_inphotoreceptor inner segmentComponent- 
5Homo sapiensISSlocated_inphotoreceptor inner segmentComponent- 
6Homo sapiensIPIenablesprotein bindingFunction17474147 
7Homo sapiensIDAenablesphosphatidylinositol-4,5-bisphosphate bindingFunction16303976 
8Homo sapiensIEAlocated_inextracellular regionComponent- 
9Homo sapiensIEAlocated_incytoplasmComponent- 
10Homo sapiensIEAlocated_incytosolComponent- 
11Homo sapiensIDAlocated_inplasma membraneComponent16303976 
12Homo sapiensIEAlocated_inplasma membraneComponent- 
13Homo sapiensIBAis_active_inciliumComponent- 
14Homo sapiensIEAinvolved_inphagocytosisProcess- 
15Homo sapiensIEAinvolved_invisual perceptionProcess- 
16Homo sapiensTASinvolved_invisual perceptionProcess9462750 
17Homo sapiensIEAinvolved_indendrite developmentProcess- 
18Homo sapiensISSinvolved_indendrite developmentProcess- 
19Homo sapiensIEAinvolved_ineye photoreceptor cell developmentProcess- 
20Homo sapiensISSinvolved_ineye photoreceptor cell developmentProcess- 
21Homo sapiensIDAlocated_incell projectionComponent16303976 
22Homo sapiensIEAlocated_inaxon terminusComponent- 
23Homo sapiensIEAlocated_insynapseComponent- 
24Homo sapiensISSlocated_insynapseComponent- 
25Homo sapiensIEAinvolved_inphotoreceptor cell maintenanceProcess- 
26Homo sapiensISSinvolved_inphotoreceptor cell maintenanceProcess- 
27Homo sapiensIDAinvolved_inpositive regulation of phagocytosisProcess19837063 
28Homo sapiensIMPinvolved_indetection of light stimulus involved in visual perceptionProcess15557452 
29Homo sapiensIBAenablesactin filament bindingFunction- 
30Homo sapiensIDAenablesactin filament bindingFunction16303976 
31Homo sapiensIBAinvolved_inprotein localization to ciliumProcess-