GenTIGSA Gene Database on Rare Genetic Disorders

Tetratricopeptide repeat domain 7A (TTC7A) Associated conditions:  1. Multiple gastrointestinal atresias  2. Severe combined immunodeficiency disease  3. Common variable immunodeficiency 
mRNA Information: Transcript Variants and Protein Isoforms
SNo. Status mRNA accession Protein accession Genomic DNA accession (Chromosome) mRNA location on genomic DNA Assembly UniProtkb ID
1 REVIEWED NM_001288951.2 NP_001275880.1 NC_000002.12 (46915865..47076122) Reference GRCh38.p14 Primary Assembly -
2 REVIEWED NM_001288953.2 NP_001275882.1 NC_000002.12 (46915865..47076122) Reference GRCh38.p14 Primary Assembly -
3 REVIEWED NM_001288955.2 NP_001275884.1 NC_000002.12 (46915865..47076122) Reference GRCh38.p14 Primary Assembly -
4 REVIEWED NM_020458.4 NP_065191.2 NC_000002.12 (46915865..47076122) Reference GRCh38.p14 Primary Assembly -
5 REVIEWED XR_007078570.1 - NC_000002.12 (46915865..47076122) Reference GRCh38.p14 Primary Assembly -

Transcript variants arise from alternative splicing during gene expression, producing multiple mRNA transcripts from a single gene, each encoding distinct protein isoforms.

PubMed Links for Transcript Variants (Isoforms)
Link 149 reference articles

Variant Information Tetratricopeptide repeat domain 7A (TTC7A) Mutation Visualization Dashboard: Pathogenic variant distribution chart

 

IndiGenomes variants: Exploring and mapping pathogenic variants in gene Tetratricopeptide repeat domain 7A (TTC7A)
ClinVar variants:Revealing mutagenic patterns

GO Term of Tetratricopeptide repeat domain 7A (TTC7A)
SNo. Reported in speceis Evidence Qualifier GO term Category Pubmed Link
1Homo sapiensIPIenablesprotein bindingFunction24417819 33122718 
2Homo sapiensIEAlocated_incytoplasmComponent- 
3Homo sapiensIBAis_active_inplasma membraneComponent- 
4Homo sapiensIEAlocated_inplasma membraneComponent- 
5Homo sapiensIBAinvolved_inphosphatidylinositol phosphate biosynthetic processProcess- 
6Homo sapiensIBAinvolved_inprotein localization to plasma membraneProcess- 
7Homo sapiensIDAinvolved_inprotein localization to plasma membraneProcess23229899