GenTIGSA Gene Database on Rare Genetic Disorders

RPGR interacting protein 1 (RPGRIP1) Associated conditions:  1. Retinitis pigmentosa  2. Leber congenital amaurosis 
mRNA Information: Transcript Variants and Protein Isoforms
SNo. Status mRNA accession Protein accession Genomic DNA accession (Chromosome) mRNA location on genomic DNA Assembly UniProtkb ID
1 REVIEWED NM_001377523.1 NP_001364452.1 NC_000014.9 (21280082..21351300) Reference GRCh38.p14 Primary Assembly -
2 REVIEWED NM_001377948.1 NP_001364877.1 NC_000014.9 (21280082..21351300) Reference GRCh38.p14 Primary Assembly -
3 REVIEWED NM_001377949.1 NP_001364878.1 NC_000014.9 (21280082..21351300) Reference GRCh38.p14 Primary Assembly -
4 REVIEWED NM_001377950.1 NP_001364879.1 NC_000014.9 (21280082..21351300) Reference GRCh38.p14 Primary Assembly -
5 REVIEWED NM_001377951.1 NP_001364880.1 NC_000014.9 (21280082..21351300) Reference GRCh38.p14 Primary Assembly -
6 REVIEWED NM_020366.4 NP_065099.3 NC_000014.9 (21280082..21351300) Reference GRCh38.p14 Primary Assembly -

Transcript variants arise from alternative splicing during gene expression, producing multiple mRNA transcripts from a single gene, each encoding distinct protein isoforms.

PubMed Links for Transcript Variants (Isoforms)
Link 157 reference articles

Variant Information RPGR interacting protein 1 (RPGRIP1) Mutation Visualization Dashboard: Pathogenic variant distribution chart

 

IndiGenomes variants: Exploring and mapping pathogenic variants in gene RPGR interacting protein 1 (RPGRIP1)
ClinVar variants:Revealing mutagenic patterns

GO Term of RPGR interacting protein 1 (RPGRIP1)
SNo. Reported in speceis Evidence Qualifier GO term Category Pubmed Link
1Homo sapiensIPIenablesprotein bindingFunction16339905 21224891 25398945 
25416956 25910212 26638075 
26871637 27107014 27173435 
31515488 
2Homo sapiensIEAlocated_incytoplasmComponent- 
3Homo sapiensIEAlocated_incytoskeletonComponent- 
4Homo sapiensIDAlocated_inciliumComponent- 
5Homo sapiensIEAlocated_inciliumComponent- 
6Homo sapiensIEAlocated_inaxonemeComponent- 
7Homo sapiensIEAinvolved_invisual perceptionProcess- 
8Homo sapiensIBAis_active_inphotoreceptor connecting ciliumComponent- 
9Homo sapiensIEAlocated_inphotoreceptor connecting ciliumComponent- 
10Homo sapiensISSlocated_inphotoreceptor connecting ciliumComponent- 
11Homo sapiensIBAinvolved_inretinal rod cell developmentProcess- 
12Homo sapiensIDAlocated_inciliary tipComponent- 
13Homo sapiensIEAlocated_innon-motile ciliumComponent- 
14Homo sapiensIEAlocated_inphotoreceptor distal connecting ciliumComponent- 
15Homo sapiensIBAinvolved_innon-motile cilium assemblyProcess-