GenTIGSA Gene Database on Rare Genetic Disorders

FAT atypical cadherin 1 (FAT1) Associated conditions:  1. Irido-corneo-trabecular dysgenesis  2. Multiple myeloma  3. Finnish congenital nephrotic syndrome 
mRNA Information: Transcript Variants and Protein Isoforms
SNo. Status mRNA accession Protein accession Genomic DNA accession (Chromosome) mRNA location on genomic DNA Assembly UniProtkb ID
1 REVIEWED NM_001440455.1 NP_001427384.1 NC_000004.12 (186587793..186726695, complement) Reference GRCh38.p14 Primary Assembly -
2 REVIEWED NM_001440456.1 NP_001427385.1 NC_000004.12 (186587793..186726695, complement) Reference GRCh38.p14 Primary Assembly -
3 REVIEWED NM_001440457.1 NP_001427386.1 NC_000004.12 (186587793..186726695, complement) Reference GRCh38.p14 Primary Assembly -
4 REVIEWED NM_005245.4 NP_005236.2 NC_000004.12 (186587793..186726695, complement) Reference GRCh38.p14 Primary Assembly -

Transcript variants arise from alternative splicing during gene expression, producing multiple mRNA transcripts from a single gene, each encoding distinct protein isoforms.

PubMed Links for Transcript Variants (Isoforms)
Link 1141 reference articles

Variant Information FAT atypical cadherin 1 (FAT1Mutation Visualization Dashboard: Pathogenic variant distribution chart
ClinVar variants:Revealing mutagenic patterns

GO Term of FAT atypical cadherin 1 (FAT1)
SNo. Reported in speceis Evidence Qualifier GO term Category Pubmed Link
1Homo sapiensIEAenablescalcium ion bindingFunction
2Homo sapiensIPIenablesprotein bindingFunction16979624 19131340 36115835 
3Homo sapiensIDAlocated_innucleusComponent15922730 
4Homo sapiensIEAlocated_innucleusComponent
5Homo sapiensIBAis_active_inplasma membraneComponent
6Homo sapiensIDAlocated_inplasma membraneComponent15922730 
7Homo sapiensIEAlocated_inplasma membraneComponent
8Homo sapiensTASlocated_inplasma membraneComponent8586420 
9Homo sapiensIDAlocated_incell-cell junctionComponent15148305 
10Homo sapiensIEAlocated_incell-cell junctionComponent
11Homo sapiensIBAis_active_inadherens junctionComponent
12Homo sapiensHDAlocated_infocal adhesionComponent21423176 
13Homo sapiensIEAinvolved_incell adhesionProcess
14Homo sapiensTASinvolved_incell adhesionProcess8586420 
15Homo sapiensIEAinvolved_inhomophilic cell-cell adhesionProcess
16Homo sapiensTASinvolved_incell-cell signalingProcess8586420 
17Homo sapiensIEAinvolved_inanatomical structure morphogenesisProcess
18Homo sapiensTASinvolved_inanatomical structure morphogenesisProcess8586420 
19Homo sapiensIEAlocated_inmembraneComponent
20Homo sapiensISSinvolved_incell migrationProcess
21Homo sapiensIBAinvolved_incell-cell adhesion mediated by cadherinProcess
22Homo sapiensIDAlocated_inperinuclear region of cytoplasmComponent15922730 
23Homo sapiensHDAlocated_inextracellular exosomeComponent19056867