GenTIGSA Gene Database on Rare Genetic Disorders

Lebercilin LCA5 (LCA5) Associated conditions:  1. Retinitis pigmentosa  2. Leber congenital amaurosis 
mRNA Information: Transcript Variants and Protein Isoforms
SNo. Status mRNA accession Protein accession Genomic DNA accession (Chromosome) mRNA location on genomic DNA Assembly UniProtkb ID
1 REVIEWED NM_001122769.3 NP_001116241.1 NC_000006.12 (79484990..79538781, complement) Reference GRCh38.p14 Primary Assembly -
2 REVIEWED NM_181714.4 NP_859065.2 NC_000006.12 (79484990..79538781, complement) Reference GRCh38.p14 Primary Assembly -

Transcript variants arise from alternative splicing during gene expression, producing multiple mRNA transcripts from a single gene, each encoding distinct protein isoforms.

PubMed Links for Transcript Variants (Isoforms)
Link 138 reference articles

Variant Information Lebercilin LCA5 (LCA5) Mutation Visualization Dashboard: Pathogenic variant distribution chart
ClinVar variants:Revealing mutagenic patterns

GO Term of Lebercilin LCA5 (LCA5)
SNo. Reported in speceis Evidence Qualifier GO term Category Pubmed Link
1Homo sapiensIPIenablesprotein bindingFunction19800048 22940612 25416956 
26638075 27173435 28514442 
32296183 35271311 
2Homo sapiensIEAlocated_incentrosomeComponent- 
3Homo sapiensIEAlocated_incytoskeletonComponent- 
4Homo sapiensIDAlocated_inciliumComponent21606596 
5Homo sapiensIEAlocated_inciliumComponent- 
6Homo sapiensIBAis_active_inaxonemeComponent- 
7Homo sapiensIEAlocated_inaxonemeComponent- 
8Homo sapiensIEAinvolved_inprotein transportProcess- 
9Homo sapiensIDAlocated_inphotoreceptor connecting ciliumComponent21606596 
10Homo sapiensIEAlocated_inphotoreceptor connecting ciliumComponent- 
11Homo sapiensIEAlocated_inciliary basal bodyComponent- 
12Homo sapiensISSlocated_inciliary basal bodyComponent- 
13Homo sapiensIBAinvolved_inintraciliary transportProcess- 
14Homo sapiensIDAenablesprotein-containing complex bindingFunction21606596 
15Homo sapiensISSacts_upstream_of_or_withinphotoreceptor cell maintenanceProcess- 
16Homo sapiensIDAlocated_inciliary tipComponent-